Oncorhynchus nerka (sockeye salmon): 115132651
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Entry
115132651 CDS
T07952
Name
(RefSeq) neural cell adhesion molecule L1-like
KO
K06550
L1 cell adhesion molecule
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
115132651
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
one04515
]
115132651
04090 CD molecules [BR:
one04090
]
115132651
04091 Lectins [BR:
one04091
]
115132651
Cell adhesion molecules [BR:
one04515
]
Immunoglobulin superfamily
L1 family
115132651
CD molecules [BR:
one04090
]
Proteins
115132651
Lectins [BR:
one04091
]
I-type lectins (Siglecs)
115132651
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
fn3
Ig_2
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
Pur_ac_phosph_N
Bravo_FIGEY
C2-set_3
Tissue_fac
V-set_CD47
CRLF2-like_D2
DUF4998
PTM_DIR17_Tudor
Motif
Other DBs
NCBI-GeneID:
115132651
NCBI-ProteinID:
XP_029521234
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All DBs
Position
LG7:complement(55618171..55698450)
Genome browser
AA seq
1234 aa
AA seq
DB search
MPHTPQHQVGSRGRRPHLLLLPLFSLLLSHAPQLSQGAIHIPSNYQINEFKKPPVITTQP
ESITVFGAEDILLTCEASGNPPPDFRWTKDGEEFIPANDPGLSVSPGSGTFMKTGVVSGP
MSQYKAKYICYAENALGTAVSNEVQLITENTPALQKEQKVKKKVEEGESVVLKCNPPFST
VPPVIHWMDERMHHIELNDRVTQGRDGNLYFSHVTVDDTRIDYTCNAQYLSARTILSKEP
ITLTVTTSNSVVRSRRPQMMRPSGTHSTYLALRGQSLELECIVQGRPTPTVQWVRKDGQL
SESRTSRHLFDRLLRISNISDSDGGEYQCSVNNSQGKVTHTYTVSVEAAPYWTKEPVSQL
YAPGETVKLDCQADGIPSPAVAWSINGKPITGKDPTPRRTMRDGTVILIDVVFTDTAVYQ
CQAHNKHGTILVNTYIFVIELPPQILNADGQKYNFTEGQKAVLQCQTFGSPRPKVTWERN
SSASLLAEPRVNLLTNGNLQITNVSHGDEGLYTCSVSNTNLSINADLDVMNRTVILSPPG
SLLVQPGKTAIFTCLAQVDPKLTPPHIQWKRSGQELFQSYAEDKYTFEGPDLIVANVQTE
DEGVYTCEVITNLDRVEASGSIIIVDRPDPPTQLQVSDPKDRNVTLSWTAGDDHNSPVIV
FVVEFEDGDSKERGWEELKRVSGTHESVTISLQPYMSYRFRVISINNIGKSDPSMPSDLH
STPPQAPDNNPENVRSESTDPDTLVITWEEMDRRVFNGPEFHYKVFWKRVVGDTTWYSNV
STEPPYIVTEVGNFSAFQIKVQAANQKGEGPELDPVTGYSGEDIPLKAPQNVAMVLLNSS
AIRVTWEPVNEKTVRGHLLGYKIHLLRFGSRGHHQGRRAREPDTSVEVETGPKEEKRVLG
GLRPYSHYTITVTVFNSKGEGPPSKTLSFETNEGAPGPPMSLRLDSHAGTEMTLHWTPPA
QPNGVLKGYLLQYQIVKSDSPMQVETIDDHKVTHLTLKQLDPHSRYRFYLRGRTSAGDGE
PITREGATTLDGAPPSNISLYVGEKSVNLSWVPGQRQRSVSFQVQYLNKQDGGKWKQSEK
LNSSASFYQLKGLTPGSQYRLRFTFSNNTFWETEITTKGAVKDKEEGQVDSEARPMKDET
FGEYRSLESDNEEKRTASQPSLCDESKLCISDDNLDGYNNGSIAVTEVTMEDSLVSQYSR
PSEATPDPGTLQDSSPLNPNTTTNGLPNSAAILD
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atgcctcacactccgcaacatcaggttggcagtagggggcgacgcccccatctcctcctc
ctccctctcttctctctcctcctatcccacgccccccagctcagccaaggagccatacac
ataccttctaactaccaaataaatgaatttaagaaacccccagtgatcaccacccagcct
gagtccatcactgtgttcggtgcagaagacatcctcctgacctgcgaagcatcagggaac
cctcctcccgatttccgctggactaaagatggggaagaatttatccctgccaatgacccg
ggcctgtcggtgtctccgggttctggaaccttcatgaaaaccggggtggtgtcaggcccc
atgagccaatacaaggccaaatacatctgctacgctgaaaacgcattaggaactgctgtg
tctaacgaggttcagctcatcactgagaacaccccggccctgcagaaagagcagaaggtg
aagaagaaggtggaggaaggagagagtgtggtactgaaatgtaaccctcccttcagcact
gttcctcctgtcatccactggatggacgagcgaatgcatcacattgagctaaatgatcgt
gtaacccagggccgggacgggaacctatacttctctcacgtcaccgtcgatgacacccgt
attgactacacctgtaacgcccagtacctcagcgctcgcaccatcctctccaaggaaccc
atcaccctgactgttacaacctctaactcagtggttcggagccgaaggccccagatgatg
aggccctcggggacccacagcacttacctcgccctccggggccagagcctggagctagag
tgcatcgtccagggccgccctacccctacagtccagtgggtgaggaaggacggtcagctg
tccgagtcccgtacgtccagacatctgtttgaccgtctgctgcgcatcagcaacatctca
gatagcgacgggggagagtaccagtgttcagtcaacaactcacagggcaaggtcacacac
acctacaccgttagcgtcgaagcggctccatactggaccaaggagccagtaagccagctc
tatgccccaggagagacggtgaaactggactgtcaggctgatggcatcccgtctcctgct
gtcgcctggagcatcaacggaaaacccatcacaggcaaagacccaacccctaggcgtact
atgagagatggaactgtgattctgatagatgtggtcttcactgatacagcagtctaccag
tgtcaggcccacaacaaacacggaaccatcctagtcaatacctacatcttcgtcatcgaa
ctgcctcctcagatcctgaatgctgacggacagaagtacaacttcacagagggacagaag
gctgtactgcagtgtcagaccttcggctctcccagacctaaagtaacatgggagaggaac
agcagcgcttctctactggctgagcccagggttaacctgctgaccaatggaaacctccag
atcaccaacgtctcccacggcgacgagggcctgtacacctgctccgttagcaataccaac
ctgtcaatcaacgctgacctggatgtcatgaacaggacagtgatcctgtctcctcctggg
tctctgcttgttcagcctggtaagacggccatctttacctgcctggcacaggtggacccc
aaactgacccctccacacattcagtggaagaggagcggacaggaactctttcagtcatac
gccgaggacaagtacacatttgagggcccagacctgattgtggccaatgtgcagacagaa
gacgagggtgtttacacctgtgaggtcatcaccaacctggacagggttgaggccagcggg
tccatcattatagtcgaccgtccagacccccccacccagctccaggtctctgaccctaag
gaccgcaatgtcaccctgagttggaccgcaggagatgaccacaacagccctgtcatagtg
tttgtggtggagtttgaagatggtgactctaaggagcggggttgggaggagctgaagaga
gtcagtggaactcatgagagcgtgaccatttctctgcaaccatacatgtcctaccgcttc
cgggtcatctccatcaacaacatcgggaagagtgaccccagcatgccctctgaccttcac
agcaccccacctcaagctccagacaataacccagagaatgtgaggagtgagtctacagac
ccagacaccctggtcatcacatgggaggagatggacaggcgtgtgtttaacggcccagag
ttccactacaaggtgttctggaaaagggtggtaggtgacacaacctggtactctaatgtc
tccactgagccaccgtacatcgtcactgaagtgggcaacttctccgcctttcaaatcaaa
gttcaggctgccaatcagaaaggagagggacctgagctagaccctgtgactggttactct
ggagaggacatccccctgaaggctcctcagaatgtggctatggtgctgctcaacagttca
gccatcagggtgacatgggaaccagtgaacgaaaagactgtcagaggacacctgctggga
tataagatccacctgctgaggtttggctccaggggccaccaccaaggccgtagggctaga
gagccagacaccagtgttgaggtggagacagggcccaaagaggagaagagggtcctgggg
ggactcagaccctactctcactacaccatcactgtcactgtgttcaacagcaagggagag
ggccccccctccaagaccctgtcctttgaaactaacgagggagctcctggccccccgatg
tccttacgcctggacagccatgcaggcacagagatgaccctacactggacacctcctgcc
caacccaacggagttctcaaaggatacctgctgcagtaccagatcgtaaagagtgacagc
ccgatgcaggtggagacgatagacgatcacaaggtcactcacctgaccctgaagcagttg
gaccctcacagccgctaccgcttctacctgagggggcgcacctcggccggggacggagag
cctatcaccagggagggagctaccacactggacggagctcctccgtccaacatcagcttg
tatgtaggagagaagtctgttaacctgagctgggtgccaggccagagacagaggagtgtg
agcttccaggtccagtacctcaacaagcaagacggtgggaagtggaagcagtctgagaag
ctgaactcgtctgcatcattctaccagctgaaaggtctgaccccggggtcacagtaccgc
ctcagattcaccttcagcaacaacaccttctgggagactgagatcaccacaaagggagca
gtcaaagataaggaggagggtcaggtagactctgaggcgcgccctatgaaggatgaaaca
ttcggagagtacagatctcttgagagtgacaacgaggagaagcggacagccagccagccg
tctctgtgtgatgagagcaaactgtgtatcagtgacgacaacctggatggctataacaac
ggtagcattgctgtcaccgaggtgaccatggaagactccctggtcagccagtacagccga
cccagtgaagccaccccggacccgggcacactgcaggacagctcccccctcaatcccaac
accaccaccaatggcctgcccaactcggctgccattttagattag
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