Oncorhynchus nerka (sockeye salmon): 115132709
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Entry
115132709 CDS
T07952
Name
(RefSeq) iroquois-class homeodomain protein irx-4-B-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115132709
Transcription factors [BR:
one03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
115132709
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
115132709
NCBI-ProteinID:
XP_029521289
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Position
LG7:8050289..8056050
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AA seq
470 aa
AA seq
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MFDIMAYPQLGYPYSPTHPFLMSTSSLANCLEPGGRSLLDSGVMPPSPQPLRCPVYESRL
LGSPGQEIPTPAIGLGVYGAGYGKSQGYYGTCGGDATALYARGTLESKDGAAAHVGASQT
PAYYPYDYAFGQYPYDRYGYGSSVDSAAARRKNATRETTSTLKAWLQEHQKNPYPTKGEK
IMLAIITKMTLTQVSTWFANARRRLKKENKVTWSPRANKSSDERGCDDDSDSAEGSQEEG
PIKSEIDVDDSVTARCVDLQQSDLEDFDLLESDGSDCDPKHQFHTKDTPVHTPPDHHHHP
KDPSTSPLRHTPDTSRHGNERLPLSADCPKHTPEHNRTTNSFYTQQDLQSTESSKPKIWS
IAQTAAIQPEFPACMHTATPSESLSPGGYPTEVPHLKVGAAGQQDSPVTTLRDWVDGVFH
DPLFRQSSFNPVLSKPAMDRAWIGLNRQVMEGRTLGQRSVEHVTSSLQNV
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatatcatggcttacccgcagttaggatatccctactcacccacacacccgttc
ctcatgagcacgagctctctggccaactgcctcgagcctggcggaaggtctcttctggac
tccggtgtgatgcccccctctccccagcctctccggtgtccggtgtacgagagcagactg
ctcggctccccgggccaggagataccaaccccggctataggtctgggtgtgtacggagct
ggctatggaaagagccaggggtactatggcacctgcggaggcgacgcaacagctttatat
gccaggggaacattggagtccaaagatggagcggctgcgcatgtgggggcctctcaaacc
cctgcttactatccgtacgattacgcatttggacagtatccatatgaccgatatgggtat
gggtcatcagtggacagtgcagctgcccggaggaagaacgctacgagggagaccaccagc
actctgaaggcctggttgcaggaacaccagaagaacccgtatcccaccaagggagaaaag
atcatgctggccatcatcaccaagatgacactgacacaggtttccacgtggtttgccaat
gcacggcggaggctgaagaaggagaacaaagtcacatggtcaccacgagccaataagagc
tctgacgagaggggctgtgatgatgacagcgacagtgcagagggatcacaagaggaaggg
ccaatcaaaagcgagatagatgttgatgattctgtaacagcgaggtgtgtggacctacaa
cagagtgatctggaggactttgatctgcttgagtcggatggttctgactgcgaccctaaa
caccagtttcacaccaaggacaccccagtacacacaccaccggaccaccaccaccacccc
aaagacccttctaccagcccactcagacataccccagacacatcccgacacgggaacgag
cggttgccactgtcagcagactgtcccaaacacacaccagagcacaaccgaacaaccaac
tcattctacactcaacaggacctgcaaagtacagagagcagcaaacctaaaatctggtcc
atcgcacaaactgctgctatccaacctgaattccctgcatgcatgcacacagccaccccc
agcgagtctctctccccaggggggtatccaactgaagtaccccacctgaaggtgggggcg
gctgggcagcaggactcgccggtgactaccctcagagattgggtggacggggtcttccac
gaccccctgttccgacagagttcctttaaccctgtgttgtccaagccagccatggacagg
gcatggattgggttaaatagacaggtgatggaaggcagaactctgggacaacgttctgtt
gaacatgttacctcgtctttgcagaatgtatag
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