Oncorhynchus nerka (sockeye salmon): 115132725
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Entry
115132725 CDS
T07952
Name
(RefSeq) transcriptional repressor p66-beta-like isoform X1
KO
K23194
transcriptional repressor p66
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115132725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115132725
03036 Chromosome and associated proteins [BR:
one03036
]
115132725
Transcription factors [BR:
one03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
115132725
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Chromatin remodeling factors
NuRD complex
115132725
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
P66_CC
GATA
LIM
Motif
Other DBs
NCBI-GeneID:
115132725
NCBI-ProteinID:
XP_029521308
LinkDB
All DBs
Position
LG7:13681911..13718717
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AA seq
671 aa
AA seq
DB search
MERMSEEALRLNLLKRGLETSEEREEALAKRLKMEGHEAMERLKMLALLKRKDLAALEGA
AAVAAGSLDGSKGGPGGSRHHHHHHQSMLAGAAAAYEEKMNGRLGGHGGPSKNGKENMVD
EPVDFSARRGDVDRERHTPSPDVIILSDNEASSPRGTPHPGERLHQANLEIFKGKNGDER
QQMIKALREELRLEEARLVLLKKLRQSQIQKENVVQKVPVVQNSPSSVQPSPIHSSQGMG
KLPVRPGMHTPEPQNLRTAQGHTVIRSGANASLPPMMMSQRVIAPNPSHLQGQRMPSKSG
MSRSSTGSMSYQQATSQQVTASQRSGSSAIYMNLAHMQAAAGGVAGVGMGSGGMGAVSPS
TMSSGTGGGGSSGVSSLADQASSQAAAKLALRKQLEKTLLEIPPPKPPAPLLHFLPSAAN
SEFIYMVGLEEVVQSVIDSQGKLRGALSRMEPFFCAQCRIDFTPHWKQEKGGRILCEQCM
TSNQKKALKAEHTNRLKNAFVKALQQEQEIEQRLQQQAALSPSTAPTVPNVGKAETMIRH
HALRQAPQPQASMQRGLSSSARGVLSNFAQASQLSVASGLLGMTGKQRCGGGGGGGTSGG
GGSSRIQHDGRRQIYNIPGGFLRTPYGLNIAYLNQGGVGANKGSSLADRQREYLLDMIPP
RSISQSINGQK
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggagcggatgtctgaggaggcgctgaggctgaacctgctcaagcggggcctggagacg
tccgaggagcgtgaagaagccctggccaagcgcctcaagatggagggccacgaggctatg
gagcgcctcaagatgctggccttgctcaagcgcaaggacctggccgcgttggaaggggcg
gcagcggtggctgccggatccctggacggcagcaaaggggggccgggggggagccgccac
caccaccaccaccaccaaagtatgctggcaggcgcggcggcggcctatgaggagaagatg
aacgggaggctggggggccacggaggccccagtaagaatggcaaggagaacatggtggac
gaaccagtggacttcagcgccagaagaggcgacgtggaccgtgagcgacacactccgtcc
ccggacgtgatcatcctgtcggacaacgaggcatccagtcccagaggaacgccccacccc
ggagagaggctgcaccaggccaacctggagatcttcaaggggaagaatggtgacgagcga
cagcagatgatcaaggctctgagggaagagctgcgtctggaggaggcccgtctggtgctg
ctcaagaagcttcggcagagccagatccagaaggagaacgttgtgcagaaggtacctgtg
gtccagaatagcccctcttcggtgcagccgtcccccatccacagttcacaggggatggga
aagctgccggtgcgccctggcatgcacaccccagagccccagaacctccgcactgcacag
ggtcacacagtcatcaggtcgggggccaacgcctccctgcccccgatgatgatgtcacag
agggtcatcgcccccaacccgtcccatctgcagggccagagaatgccctccaagtctggc
atgagccgctctagcacgggcagcatgagctaccagcaggccactagccagcaggtgacg
gcgtcccagcgttcgggctcctctgcaatctacatgaacttggcccacatgcaggcggcg
gctggtggcgtggccggtgtggggatgggcagcggcgggatgggcgctgttagcccttcc
accatgtcgagcggcacaggtggcggcggcagctccggcgtgagttccctggcggaccag
gccagcagccaagcggcagccaagctggccttgcgcaaacagctggagaagaccctgctg
gagatcccgccgcccaagccaccagccccactcctgcacttcctgccgtcggcggccaac
agcgagttcatctacatggtgggcctggaggaggtggtgcagagcgtcatcgacagccag
ggtaagctgcggggggcgctgtcacgcatggagcccttcttctgcgcccagtgcaggatc
gacttcaccccacactggaagcaggagaaaggcgggcgtatcctctgcgagcagtgcatg
acgtccaatcagaagaaggccctgaaggcggagcacactaataggctgaagaacgcattc
gtcaaggccctgcagcaggagcaggagattgagcaaaggctccagcagcaggcggccctc
tcccccagcacggctccgactgttcccaacgtcggcaaggctgagaccatgatccgacat
cacgccctgcgtcaggctccccagcctcaggcctccatgcagcggggtctctccagctcg
gcgaggggcgtcctctccaacttcgcccaggcctcccagctctccgtggccagcggcctg
ctggggatgacggggaagcagcgctgtggaggaggtggtggtggcggaactagtggcggc
ggtggcagcagtcggatccagcatgatggccgccgccagatctacaacatccccggtggg
tttttgagaaccccttatgggttgaacattgcctacctgaaccaaggaggggtcggggcc
aacaaaggctccagcttagcggaccgccagagggagtacctgttggacatgatcccgcca
cgctccatatcacagtccatcaacggacagaaatga
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