Oncorhynchus nerka (sockeye salmon): 115132801
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Entry
115132801 CDS
T07952
Name
(RefSeq) transcription factor HES-4-B-like isoform X1
KO
K06054
hairy and enhancer of split 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03460
Fanconi anemia pathway
one04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
115132801
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
115132801
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115132801
03400 DNA repair and recombination proteins [BR:
one03400
]
115132801
Transcription factors [BR:
one03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
115132801
DNA repair and recombination proteins [BR:
one03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
115132801
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
Spectrin_1st_PEPL
Caulimovir_coat_dom
Motif
Other DBs
NCBI-GeneID:
115132801
NCBI-ProteinID:
XP_029521400
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All DBs
Position
LG7:complement(38782217..38784074)
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AA seq
290 aa
AA seq
DB search
MPADTMEKQTASPIAGAPANASHTPDKPKNASEHRKSSKPIMEKRRRARINESLGQLKTL
ILDALKKDSSRHSKLEKADILEMTVKHLRNLQRVQMTAALSADNTVLSKYRAGFNECMNE
VTRFLSTSEGVNTEVKSRLLNHLSGSLGQMIAMNYSQPTPTQQAHLAQPLHVQLPSTVPS
SVSMGSKLSTVEALSPKVFGGFQLVPATDGQFAFLIPNPAFASASTPVIPLYANAGVPMS
VNASPVHCSSAPTASSPVHGMTSFVGVSQAVSPVGVSTGSESTEAVWRPW
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgccagccgacaccatggagaaacaaacggcatcccctattgctggtgcacctgcaaat
gcttcccatactccagacaaacccaagaatgccagcgagcatagaaagtcctcaaagcca
atcatggagaaacgtaggagagcgaggataaacgaaagccttggccaactcaagacactc
atcctcgatgcacttaaaaaagatagttccagacattctaaattggagaaagccgatatt
ctggaaatgacagtgaagcatttacggaatttacagcgtgtgcagatgactgcagcgttg
tcagcagacaatactgtcctcagtaaataccgggcgggattcaacgaatgcatgaacgag
gtcactcgcttcttgtccaccagcgagggggtgaacacggaggtgaagtcgcggcttctc
aaccacctgtcaggttccctaggccagatgatcgccatgaactactcacagccaacccca
actcaacaggctcaccttgcgcagcctcttcacgtgcagctaccttctaccgtgcccagc
agtgtctctatgggttccaaactcagcaccgtggaagccttgtctccaaaagttttcggg
gggttccagcttgtgcctgccaccgatggacagtttgcctttcttattcccaaccctgca
ttcgcctcagcatcaaccccagtcatccctctgtatgctaacgcaggtgtacctatgtcg
gttaacgccagtcctgtccactgcagctctgcgccaacagcatcatccccagtccatggg
atgacatcattcgtcggtgtttctcaggccgtcagccctgtcggtgtcagcactggttcg
gagagcactgaggctgtttggcgaccctggtag
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