Oncorhynchus nerka (sockeye salmon): 115132878
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Entry
115132878 CDS
T07952
Name
(RefSeq) probable C->U-editing enzyme APOBEC-2
KO
K18772
C->U-editing enzyme APOBEC2 [EC:3.5.4.-]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
115132878
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Gene cluster
GFIT
Motif
Pfam:
APOBEC2
NAD1
APOBEC_N
NAD2
SNAD4
APOBEC_C
APOBEC3
APOBEC4
APOBEC4_like
APOBEC1
Motif
Other DBs
NCBI-GeneID:
115132878
NCBI-ProteinID:
XP_029521479
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Position
LG7:complement(58348175..58365587)
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AA seq
269 aa
AA seq
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MADNHPGWLSVKKREKKGESKPLEEEQEKEKVLKTGYQVVKTGYQHQPGEVRKKEGGGEK
TGGTEEITEVAEGGVENGEFETIELPPWEIVTGEQMSPFYFKFQFRNVEYSSGRNKTLLC
YRVETPEGTTDPLQGYMEDEHATTHVEEAFFTRVLPHYDSSLEYEVRWYVSSSPCAACFT
KMANVLRLRKNLRLYLLMSRLFLWEEPEIKVGLRCLASLGVRIRMMKPSDFLSVWETFVE
KEEDMTFNPWEDCQDNYQYYQYRLNTILK
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaaccacccaggctggctttcagtgaagaagagggagaagaaaggagagagc
aaaccactggaggaggagcaggagaaggagaaagtgttgaagacaggataccaagttgtg
aagacgggataccaacaccaaccaggggaggtgaggaagaaggagggaggcggagagaag
acaggtggaacggaagagataacagaggtagcagaaggaggagtggaaaatggagagttt
gaaaccatcgagctgccaccatgggagatcgtcactggggagcagatgagtccgttctac
tttaagttccaattccggaacgttgagtattcatctggtcgtaataagacgttgctatgt
taccgcgtggagactccggagggcaccactgatccactacagggatacatggaggacgaa
cacgccaccacacacgtagaggaggccttcttcacacgggtcctcccccactatgactcc
tccctggaatacgaggtccggtggtacgtatcttccagtccctgtgcagcctgcttcacc
aagatggccaatgtcctcagactgagaaagaatctccgcctctacctcctcatgtcccgc
ctcttcctgtgggaggagcctgagataaaggtgggcctgcggtgcctggcgtcactgggt
gtgaggataaggatgatgaagccgtctgacttcttgtctgtctgggaaacgtttgtagag
aaggaggaggacatgacctttaacccctgggaggactgtcaggacaactaccaatactac
cagtacagactcaacaccatcctcaagtaa
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