Oncorhynchus nerka (sockeye salmon): 115132975
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Entry
115132975 CDS
T07952
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator-like protein 2 isoform X1
KO
K09099
aryl hydrocarbon receptor nuclear translocator-like protein 2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115132975
Transcription factors [BR:
one03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
115132975
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS
PAS_3
HLH
PAS_9
Per3-like_PAS-A
PAS_4
bHLH_INO2
PAS_2
MGC-24
Motif
Other DBs
NCBI-GeneID:
115132975
NCBI-ProteinID:
XP_029521598
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Position
LG8:1689538..1708266
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AA seq
684 aa
AA seq
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MTGPQTNEQFLMLGEMPAGKGRERAGLEYFLHSTSIRNDPTISRHSQGPLQLGETNSLPV
SRPDVITPHLAGAMPDVITPHKAGAMPDVITPHLAGAMPIQELSRKRKGDIDNRENGDAQ
IEEEQSRSEDDDQQVKIKCFREPHSQIEKRRRDKMNTLIDELSAMIPSCNPMARKLDKLT
VLRMAVQHLKALKAGASSSFTDVNFKRKPSFLPQDDLKHLVLTAADGFLFVVSCDRGKIL
FTSESVSKFLNYSRLELIGQSLFDYVHPKDISKVKEQLSASGLYPRERLIDAKSSPGSLA
GLQVQDLPVGAVQLCTGARRSFFCRMKHSRTVMKTEDKTIQPSSSKKKESQRYCTVHCTG
YMRSWPSTQLDAESDDNEFSHLSCLVAVCRVHPNNACQPSLEVKVKPTQFVTRFAIDGKF
TFVDQQATTVLGYLPQELLGTSCYEYFHQDDLRPLAETHRKVLRSKEKIETSCYKFKTKL
GSFVMLQSQWFSFINPWTKEIEFIVSTNRVFGPGHTEAEQPSSSKLLDEESKHTILIPGI
SSAMATMIYAGSIGTQIANELLDSNRVNCSPSSETSSPFCPPQDRSPMVSSHANMSNEEV
TDTVSKSRSESASKGASNAGSNTHMDTARSPPAESSQMDLDSMVGPVLGILSNDEAAMAV
IMSLLETDANLGDAVDFDNMHWSH
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgacgggaccgcagacaaacgaacagtttctcatgcttggtgagatgcctgcaggaaaa
ggaagagagagggcagggctggaatattttctgcattccacctctatcagaaatgacccc
acaatttctagacatagccaaggacccttgcagttaggagaaaccaatagccttcctgtt
tctcggcctgacgtcataacgccccacctggcaggagccatgcctgatgtcataaccccc
cacaaggcaggagccatgcctgatgtcataaccccccacctggcaggagccatgccaatc
caagagctgtctaggaaacggaagggggatatagacaacagggaaaatggtgatgctcaa
atagaggaggaacagagcagatcggaagatgatgatcaacaggtgaaaataaaatgcttc
agggagccacacagccaaattgaaaagcggcggagggacaaaatgaacacccttattgac
gagctgtcagccatgatcccctcctgtaaccccatggccagaaagcttgacaaactcact
gtgctgcgaatggctgtgcagcacctcaaagccctgaaagcaggtgctagcagttccttt
actgacgttaacttcaaacgcaagccttcgtttctgcctcaggatgatctcaagcacctg
gtgctcacggctgcagatgggttcctgttcgtggtgagttgtgacagggggaagatcctc
tttacctcagaatccgtctccaagttcctcaactacagtcggttggaactaattggacag
agtctttttgattatgtccacccgaaggacattagtaaagtgaaagagcagctgtcagcc
tcaggattataccctcgcgaacggctcatagatgccaaaagctctcccggttctttagca
gggttacaggtgcaggaccttcctgtgggagcagttcaactgtgtacaggggcacggcgc
tccttcttctgccgcatgaagcacagcagaacagttatgaagacagaagacaaaaccatc
cagcccagcagctccaagaaaaaggagtctcaacgatactgcactgtccattgcactggt
tacatgcggagttggccctccacccagctggatgctgagagtgacgataacgagttctcc
catctgtcctgtctggtcgctgtgtgccgtgttcaccctaacaatgcctgtcagccctca
ctagaggtcaaggtcaaacccacccagtttgtcactcgctttgcaattgacggcaagttc
accttcgtggaccaacaagccactactgttctgggctacttgccacaggaactactgggg
acgtcttgttatgagtacttccaccaggacgacctgcgacccctcgcagagacacacagg
aaagttctccgcagtaaagagaagattgagaccagctgctacaagttcaaaacaaaactt
ggctccttcgtcatgcttcaaagtcagtggtttagttttataaacccgtggaccaaagaa
attgagtttattgtgtcaacaaaccgagtttttggacccggtcacacagaagctgaacag
ccgagcagctccaagctgttggacgaagagagcaaacatactatccttatccctggcatc
tccagtgccatggccactatgatctacgctggcagcatagggacccagatagcaaacgag
ctcttggactccaacagggtcaattgttctccatcgagtgaaacctccagtcccttctgt
ccacctcaggacaggtctccaatggtctcctctcatgccaacatgtcaaatgaggaggtg
actgatacagtgagcaagtctagatcagagtctgcttcaaagggggcctcaaacgctggc
agcaacacacatatggacacagcccgttctcccccagcagagagctcccagatggacctg
gacagcatggtgggaccagtcctcggtatcctgagcaacgacgaggctgccatggccgtc
atcatgagcctgctggagactgatgccaacctgggcgacgcagtagactttgacaacatg
cactggtctcactag
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