Oncorhynchus nerka (sockeye salmon): 115133037
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Entry
115133037 CDS
T07952
Symbol
mybpc1
Name
(RefSeq) LOW QUALITY PROTEIN: myosin-binding protein C, slow-type
KO
K12557
myosin-binding protein C, slow-type
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
115133037 (mybpc1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
one04812
]
115133037 (mybpc1)
Cytoskeleton proteins [BR:
one04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
115133037 (mybpc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
ig
Ig_2
THB
Ig_DSCAM-DSCAML_C
Ig_CYK3_C
PHD_4
Motif
Other DBs
NCBI-GeneID:
115133037
NCBI-ProteinID:
XP_029521725
LinkDB
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Position
LG8:complement(4017736..4061959)
Genome browser
AA seq
1352 aa
AA seq
DB search
MPEPTKKDEMSNGEKESVAPDSSEVPMPTPEISLEVSPPPPEQPVETEGKDPQPIEVIKP
VQPEPVENGSKEPEPEAVVVGAKEQVESVNSEVKEAPSPCSPPPPATVTEEAEPVVTEVT
QPPEPVVSVVTPPPPPPPPQEPVVTVVSPPPPSPQEPVVTVVTPPPPPPPAQEPVVTVVT
PPPPPEPVVTVQVTPPPPPADKDDDATTNTPSPPPPPEDANTVKKLSIELPNDSVHVSAM
GRKDSDDSVHVSAMGRKDSVWSLGEGQAPEDLDKPVDTPPLSSLLIERPQGGSITVGGDI
SFVAKVEAQDLLRKPTIKWFKGKWMDLASKTGKHLQLKETFDRRTKIHTFEMHIIKAKDN
YAGNYRCEVTYKDKFDSCSFDLEVKELEQSQSVDIRSAFKRSSEGHEDAGDLDFSGLLKH
RNQREPKQDETPEVDVWEILKSARPDQYEKIAFEYGITDLRGLLKRLKKTKKEEKKSEAF
AKKLDPAYQADKGGKIRLVVDLADPTVELKWYKNGQEIRPTPKFIFEQKGTQRILVINNC
GLNDDAAYSVAAGEEKCTTELFVKELPVKITKEIEAVKTTVNERIELECEVSEEGAQVKW
CKNGVEVPTGPRSRYRVKSEGLKHWLIIDDASKEDTGTFSLMASGGTSEAKIQVELKPLK
IIQDLQDMTVLLGQPLKMHCEIFPGNVPGRWYRNGQLIQSNDRINILQRAKNHRLEIVNS
TIHDAGDYTFVPEGYSQSLCAKIHIVDPPRVHLESLNFPDNTVTIVAGNKLRVEIPISGE
PAPRVVWMKGERVILDSGHRVRAETFPDHTSLTIDIAEKEDTGNYKIVLQNEAGEAGASI
KVKVVDIPDPPEVPLVTEVGGDWCSMTWEPPIYDGGSPILGYFIERKKKQSSRWMRLNFD
LNKETTFEPKKMIEGVPYEVRVFAVNAIGVSKPSEPSKAFVPLAVTSEPTMLVVDDVTDT
TVTMKWRPPDTIGAAGLDGYLVEYCIEGTDDWRVTNKELTEKTKYTITDLPPEAKILVRV
RAINAAGASTPRTLQHSILVKEVIEPPKIRIPRHLKQTYTRKVGEAVNLVIPFMGKPRPK
VSWLKEGQTVDPTQVTIRNTDCDSIIFIRKAERKHSGKYDMKVEVENHVDTAIVDIQIVD
LPGPPQCVKIDEVWGGNVALDWTPPKDNGNAAITGYTIQKADKKTMEWYTCIEHYHRTCI
TITELVVGNEYYFRIYSENMVGLSEGATQTKDSALIVKEGMQLKNPEYIDHDFKEPPKFT
QPLINTFAIAGYNATLNCSVRANPRPKVIWMKNKIAIIDDPRYRMFSNQGVCTLEIRKPS
PYDGGMYSCKAINDLGDALVECKLEVKVPTQE
NT seq
4059 nt
NT seq
+upstream
nt +downstream
nt
atgccagagcccacaaagaaagatgagatgtccaatggtgagaaagagagtgttgcccca
gacagtagtgaggtgccaatgcccacacctgagatatccctcgaggtctcacctccaccc
ccagaacaaccggtagagactgaggggaaggatccacagcccatagaggtgattaagcct
gtacagccagaaccagtagagaatgggtctaaagaaccagaaccagaggcggttgtggtc
ggggctaaagagcaagtcgagtctgtgaactctgaagtaaaggaggccccgtccccttgc
tcacccccaccgcctgcaaccgtgacggaggaagcagagccagttgttacggaggttaca
caaccgccagagcctgttgtttcagtggttaccccaccaccaccaccacccccacctcaa
gagcctgttgttacagtggttagcccaccaccaccctcacctcaagagcctgttgttaca
gtggttaccccaccaccacccccacctcccgctcaagagcctgttgttacagtggttacc
ccacccccacctccagaaccagttgttacggtgcaggttaccccacccccacctccagca
gataaagatgatgacgctacaaccaacaccccatcaccaccgcccccaccagaggatgcc
aatacagtcaagaaactctctattgagctgcctaatgatagcgtccatgtgtcagccatg
gggagaaaagactcagatgatagcgtccatgtgtcagccatggggagaaaagactcagtg
tggtctctgggagagggacaggctccagaagaccttgacaagcccgtagacaccccaccg
ctgtccagcctgctcatagaaagaccccagggcggatccatcactgtgggtggagacatc
tcctttgttgccaaggtggaggcccaagacctgctccgtaaacccaccatcaagtggttc
aaagggaaatggatggacctggccagcaagaccggaaagcacttgcaactgaaagaaacc
tttgaccgacgcaccaagattcacacatttgagatgcatatcatcaaggccaaagacaac
tatgctggaaactacaggtgtgaggtcacctacaaggacaaatttgacagctgttccttt
gacctggaagtgaaagaactggaacagtcacagagtgttgatattcgatcagccttcaaa
agaagcagtgaaggacacgaggatgcaggggatcttgactttagtggtcttcttaaacat
agaaaccaaagggagcccaagcaggatgagacgcctgaagtggacgtgtgggagatcctg
aagtcggccaggccagaccagtacgagaagatcgcctttgagtacggcataacagacctg
cggggtctgctcaagaggctgaagaagaccaagaaagaggagaagaagagtgaagctttt
gccaagaagttggatccagcataccaggctgacaaaggagggaagatccgcttagtggtg
gatcttgcagaccccacagtagagctgaaatggtacaagaacggccaggagatccgtcca
actccaaagtttatctttgagcaaaagggcacacagcggatcctggtcatcaacaactgc
ggcctgaatgatgatgctgcttattccgtagctgcgggagaagagaagtgcaccacagag
ctgtttgtcaaagagttaccagtgaagattactaaagagattgaggcggtgaaaacgaca
gtgaacgagaggattgagttggagtgtgaagtgtctgaagaaggtgctcaagtaaaatgg
tgtaagaatggcgtagaggtaccgaccgggccccggtcacgctaccgtgtcaagtctgag
gggctgaaacactggctaatcattgacgatgcctcaaaggaggacactggaacattctcc
ctaatggcctctgggggcacctctgaagccaaaatccaggttgaattgaagccactgaag
attattcaggatttgcaggacatgacagtgcttttgggccagccactgaagatgcactgt
gagatcttccctgggaatgttccaggtcgctggtacaggaacggacagttgatccagtcc
aacgaccgcatcaacatcctgcaaagagccaagaaccaccgattagaaattgtgaacagc
accattcacgatgctggggattatacctttgtgccagagggatactctcagagcctctgt
gccaaaattcatatcgttgatcctcccagggtgcacctggagagcttgaacttccctgac
aacacagtgaccattgtggcaggaaataaactccgtgtggagatccccatcagtggagaa
ccagcacccagagtggtgtggatgaagggagagagggtaatccttgactctggccaccgt
gtgcgagctgaaacctttccggatcacaccagtcttaccatcgacatcgcagagaaggaa
gacacaggaaactacaagatagtcctgcagaatgaggctggggaagcaggggctagtatc
aaagtcaaggtggtggatatcccagaccctcctgaagttcccctagtcacggaggtggga
ggagactggtgctctatgacatgggaacccccgatctatgacggaggctcacccatctta
ggctacttcatcgaaaggaagaagaagcagagttccagatggatgaggctgaactttgac
ctgaacaaagagaccacatttgagcctaaaaagatgattgagggtgtcccatacgaggtg
cgcgtctttgctgtgaatgccatcggtgtgtccaaacccagcgagccatccaaagccttt
gtgcccctggctgtgaccagcgagcccaccatgctggtggtggatgatgtcacagacacc
acggtgaccatgaagtggcgtcccccagacaccattggagctgcaggcttagacggctac
ctggtggagtattgcatcgaaggaactgatgactggagagtaaccaataaggagctgaca
gagaagactaagtacaccatcactgacctccctccagaggctaagatcctggtaagggta
agggccatcaatgctgccggcgccagcactcccagaacacttcagcactctatcctggtc
aaagaggtcatcgaaccacctaagatccgcatcccccgtcacttgaagcagacgtacact
cgtaaagtcggagaagccgtcaatctcgttattccattcatgggaaagcccaggccaaag
gtgagctggctgaaggagggtcagacggtggaccccacgcaggtcactatccgcaacaca
gactgtgacagcatcatcttcatccgcaaagcagagaggaagcactctgggaagtacgat
atgaaggtggaggtggagaaccacgtggacacggctatcgtagacatccagatagtagac
ctcccagggcctccacagtgtgtgaagatagatgaggtctgggggggaaacgtggctctg
gactggacccctccaaaggacaatggcaacgccgccattacaggctacaccatccagaaa
gcagacaagaagaccatggagtggtacacgtgtattgagcactaccaccgcacctgcatc
accatcaccgagctggtggtggggaacgagtactacttcagaatctactctgagaacatg
gtgggtctgagcgagggtgccacccagaccaaggacagcgccctcattgttaaagaaggc
atgcaactgaagaacccagagtacatcgaccacgacttcaaagagcctcccaagttcacc
cagcccctcatcaacacctttgccatcgctggttacaatgccaccctcaactgcagcgtc
cgtgccaacccacggcccaaagtgatttggatgaagaataagatagccatcattgacgac
ccgcgctaccgcatgtttagcaaccaaggggtctgcaccctggagatccggaaacccagt
ccctacgacgggggcatgtactcctgcaaggccattaatgacctgggtgatgcactagtg
gagtgtaagctggaggttaaagtccccactcaggaatag
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integrated database retrieval system
