Oncorhynchus nerka (sockeye salmon): 115133085
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Entry
115133085 CDS
T07952
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-5-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04080
Neuroactive ligand-receptor interaction
one04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115133085
04082 Neuroactive ligand signaling
115133085
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
one04040
]
115133085
Ion channels [BR:
one04040
]
Ligand-gated channels
GABA-A
115133085
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
115133085
NCBI-ProteinID:
XP_029521815
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Position
LG2:5571922..5604159
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AA seq
471 aa
AA seq
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MMALSTDIEDKMPSFSTMKHVWISVLLVCITCHVGLGQTTAEALKEAEANDNITIFTRIL
DGLLDGYDNRLRPGLGEKVTEIKTNIFVTSFGPVSDTEMEYTIDVFFRQSWKDERLCFKG
PMEMLPLNNLLASNIWTPDTFFLNGKKSIAHNMTTPNKLLRLKDDGTLLYTMRLTISAEC
PMQLEDFPMDAHACPLKFGSYAYPVSEVVYLWQTGAAKSVVVAEDGSRLNQYHLIGQTAG
SEDIYTSRGQYTVMMCHFYLKRKIGYFVIQTYMPCFMTVILSQVSFWLNRESVPARTVFG
VTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRSWAWDG
KKAMEAQHPKKRDPMVLSKKPNNVCTAGVNYTPNITKDISISTISNSTSIQLRSSETEVL
DPKKTYNSVSKIDKMSRIVFPVLFGTFNLVYWATYLNREPVIKGVNILAPT
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgatggctctctctacagacatagaggacaaaatgcccagcttttctacaatgaaacac
gtgtggatctctgtcttgctggtgtgtattacatgtcacgtgggtcttggccagaccaca
gcagaggcattgaaagaggcagaggctaatgacaacatcaccatcttcacacggatactt
gacggactgctggacggctacgacaacagactcagaccaggacttggagaaaaggtcacg
gagatcaaaaccaatatatttgtcacaagctttggcccagtttcagatactgaaatggaa
tacaccatcgatgtgtttttccgacaaagctggaaagacgagcgcctgtgtttcaaagga
cccatggagatgctgcctctgaacaacctcctggccagtaacatctggaccccagacaca
ttcttcctcaacgggaaaaagtctatcgcccacaacatgaccacgcccaacaagctactg
agactgaaggatgacgggacgctgctctacactatgaggttaaccatatcggcagagtgt
cccatgcagttggaggacttcccaatggatgctcacgcttgccctttgaagtttggaagc
tatgcttatccagtctctgaggtggtgtacctctggcaaaccggtgctgccaagtctgta
gtggtggcagaagacggatcccgtctcaaccagtaccacctgattggccagaccgcaggc
tctgaggacatctacaccagtcgaggacagtacacagtcatgatgtgtcacttctacctg
aagaggaagattggttactttgtcattcagacctacatgccctgcttcatgaccgtgatc
ctgtcccaggtgtccttctggctcaaccgtgaatctgtaccagccaggaccgtttttggt
gtcactacagtgctgactatgactactctcagtatcagcgctcgcaactcgctgcctaag
gtggcctacgccacagccatggattggttcatcgctgtgtgctatgcgttcgtcttctcc
gcgcttatcgagtttgccaccgtcaactatttcaccaagaggagctgggcgtgggatggc
aagaaggccatggaggctcagcacccaaagaaaagggaccctatggtgctttctaagaag
cccaacaacgtctgtacagcaggagtgaactacacccccaacatcactaaggatatctct
atctccaccatctccaacagcacctccatacaactaagatcgtctgaaacagaagtcctg
gaccccaagaaaacctacaacagcgtgagcaaaatcgacaaaatgtcccggatagttttc
cctgtcctatttggaacctttaacctagtgtactgggctacttacctcaacagagaaccg
gtcatcaaaggagtcaacatattggctccaacatag
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