KEGG   Oncorhynchus nerka (sockeye salmon): 115133120
Entry
115133120         CDS       T07952                                 
Name
(RefSeq) LOW QUALITY PROTEIN: importin-8-like
  KO
K18755  importin-8
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:one00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    115133120
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:one03019]
    115133120
Messenger RNA biogenesis [BR:one03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     115133120
SSDB
Motif
Pfam: IBN_N Cse1 DUF1405 DUF2709
Other DBs
NCBI-GeneID: 115133120
NCBI-ProteinID: XP_029521886
LinkDB
Position
LG8:complement(6798466..6812564)
AA seq 1033 aa
MDPNRIIQALKGTIDPNLRIAAENELNQSYKIINFAPTLLQIIVSEQVEFPVRQAAAIYL
KNMVSQYWQDREPSLGEVVFPFNIHENDRTQIRDNIVEGIIQCPESIRAQLTVCLRAIIK
HDFPGRWTAIVDKIGLYLQSQNSGSWYGSLLALYQLVKTYEYKKAEERDPLLAAMQIFLP
RIQQLVTQLLPDGTIFSVLIQKQILKIFHALVQYSLPLQLINNTVITQWMELLRAVMDRD
VPPSTFYFFILYCETLEVDEDDRPDLVWWKSKKWALYIITRLFERYGSPGNVTKEYFEFA
DFFLKTYAVGIQQVLLKVLDQHRQKQYVTPHVLQKSLNYLNQGLSHSLTWKHMKPHMQTI
SQEVIFPLMCYKDEDEKLWQEDPYEYIRMKFNVYDDHALPATAAQSLLCKAARKRKEVLP
QMMEFCHQIMMEPSADPRRKDGALHVIGSLAELLLKKRVYREQMELMLQNYVFPLLNSPL
GYLRARSCWVLHSFSPLRFHNELVLRNAVELVKQGLIADKEMPVKVEAAIALQTLVSNQE
QAKVYIRPYIRPVMQELLHVIKETENDDLTNVIQKMICEYNQEXXXXRLRLYVCLQAEIA
EIFTKVLQSEEYEESEDKTVMALGILSTIDTILTVMEDHKEITQQLEGICLQVMGLVLQK
PIIEFYEEILSLGFGLTCQTISPQMWQLLAVLYEVFQNDCFDYFTDMMPLLHNYITVDTD
MLLSNPKYLEVIYNMCKKVLTSDAGEDAECHAAKLLEVIVLQCRGRGIDQCIPLFVEAVL
ERLTRGVKSSELRTMCLQVAIAALYYNPALLIHTLDNMHFPHTPQPITAHFINQWMNDTE
FFLGLHDRKMCIIGLSVLMELPSRPVVVEGVAAQIVPSVLLLFLGLQHLYSSRLNKPDLL
ACPGVPEEDQNEEIPSDEDEVNENCNAMMQQQTSTRVGHEDDDDDEEEEDDEDYWDEEGL
ERTPLEEYNTPLDFDNGEDEYQFFTAALLRVQNTDQPWYQSLTTPLSDDQKKQLQEIYSL
SQQRRSTAAKGQW
NT seq 3102 nt   +upstreamnt  +downstreamnt
atggatcccaatcggataattcaagccctgaaagggacgattgatcccaacctccggata
gcggctgaaaacgaactcaatcagtcgtacaagatcatcaacttcgcccccactctgctc
cagatcattgtgtctgaacaggtggagttccctgttcgacaagcagcggccatctaccta
aagaacatggtgagtcagtactggcaggaccgcgagccctctctaggggaggtggtgttc
cccttcaacatccacgagaacgaccgcacgcagatcagagacaacatcgtggagggcatc
atccagtgtcccgagtccatccgggcccagttgacagtgtgtttgcgagccatcataaag
cacgacttccctgggcgctggacggccatagtggataagatcggcctgtatctgcagtct
cagaacagtggcagctggtacggcagcctgctggccctctaccagcttgtcaagacctac
gagtataagaaggcggaggagagggatccactgctagcagccatgcagatcttcctgccc
cgtatacagcagctcgtcacccagctactgcctgacggcaccatcttctctgtcctcata
cagaaacagatcctcaagatcttccacgcactcgtacagtactccctgcctctccagctg
attaataacacagtcattacccagtggatggagctcctcagagctgttatggacagagat
gtcccccccagtacgttttatttcttcatcctttattgtgagacgttggaagtggatgag
gatgaccgtcctgacttggtgtggtggaagagtaagaagtgggccctatacatcatcacc
agactgttcgagaggtacggaagcccaggcaacgtgacaaaggagtactttgagtttgca
gactttttcttgaagacgtacgctgtagggatccaacaggtcctgttgaaggtgctggac
caacaccgacagaagcagtatgtcacgcctcacgtcctccagaagtctcttaactacctg
aaccagggcctgtctcactccctcacctggaaacacatgaagccacacatgcagaccatc
agccaagaggtgatcttccctctaatgtgttacaaagacgaggatgagaaactgtggcag
gaggatccatacgagtacatccgcatgaagttcaatgtgtatgatgaccatgccctccct
gccaccgccgcccagagcctcctgtgtaaagcagcccgcaagaggaaggaggttcttccc
cagatgatggagttctgccaccagattatgatggagccctctgctgacccccgcaggaag
gatggggcgctgcacgtcatcggctcactggccgaactcctactgaagaagagggtgtac
agggagcagatggagctgatgttacagaattatgttttccctctactcaactcccctttg
ggatacctccgggccaggtcgtgctgggtgctgcattcgttcagcccgctgcgtttccat
aacgagttggtcctgaggaatgcggtggagctggtcaaacagggcctcatagcagacaag
gagatgcccgtcaaggtggaggctgctatcgccttgcagacactggtcagcaaccaggag
caagctaaggtctacatcaggccctacatccggcctgtcatgcaggagctgctccacgtc
atcaaggagacggagaacgatgacctcactaatgtcattcagaagatgatctgcgagtac
aaccaggaagnnnnnnnnnncaggctgagattgtatgtgtgtctccaggctgagattgct
gagatcttcaccaaggtgctacagagtgaagagtatgaggagagtgaagacaagacggtg
atggctctggggatcctcagcaccatagacaccatactcactgttatggaggaccacaag
gagatcactcagcagttggagggcatctgtttacaggtgatgggcctggtgctgcagaag
cccatcatagagttctacgaggagattctgtccctggggtttgggctgacctgccagacc
atctcccctcagatgtggcagctactggcggtgctctacgaggtcttccagaacgactgc
tttgactacttcacggatatgatgcctcttttgcacaactacattaccgtggatacagac
atgctcctgtccaaccccaaatatttagaggtcatatacaacatgtgcaaaaaggtgctg
accagtgatgcaggtgaggatgcagagtgtcacgctgccaagctgctagaggtcatcgtc
ctccagtgtcgggggaggggcattgaccagtgtatcccgttgttcgtggaggctgtgttg
gagcggctaaccagaggtgtgaagtccagtgagctgaggaccatgtgtctgcaggtggcc
atcgctgctctctactacaacccagccctgctcatccacacgctggacaacatgcacttc
ccccacaccccacagcccatcaccgctcacttcatcaaccagtggatgaatgacactgag
ttcttcctggggctccatgaccgtaagatgtgtatcatcggactgagtgttctgatggag
ctaccctccaggccagtggtggtcgaaggggtagcggctcagatcgtccccagcgtcctg
ctcctcttcctggggctccaacacctttactcctcccgcctcaacaagccagatcttctg
gcctgtcctggggtaccggaggaagaccagaacgaggagatccctagtgatgaggacgag
gtgaatgagaactgtaacgccatgatgcaacagcagactagcacacgcgtaggccacgag
gacgacgacgacgatgaggaggaggaggatgatgaagactactgggatgaagaagggctg
gagaggacacccctggaggagtacaacacgcctctggactttgacaatggagaggacgag
taccagttcttcaccgctgccctactcagggtccagaacactgaccagccttggtaccag
tctctgaccacgcccctcagtgatgaccagaagaaacagctgcaggagatctacagcctg
tcccagcagaggaggagcaccgctgccaagggccaatggtga

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