Oncorhynchus nerka (sockeye salmon): 115133121
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Entry
115133121 CDS
T07952
Name
(RefSeq) caprin-2-like isoform X1
KO
K18744
caprin-2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115133121
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
115133121
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Gene cluster
GFIT
Motif
Pfam:
C1q
Caprin-1_dimer
Caprin-1_C
BclA_C
Motif
Other DBs
NCBI-GeneID:
115133121
NCBI-ProteinID:
XP_029521887
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Position
LG8:complement(6834625..6842296)
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AA seq
941 aa
AA seq
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MVQLSPSPDRDVSPSPECSEKGRQGSPKIGSPGGLSPLQLALAASTTIYQGYEIYIEDGL
ICLKHKIRNLEKKKIKLEDYRKRLQHGESLNQDQIDAVEKYDEVIHNLQFAQELHKTLGG
LTQELLKAQKKALRKEQMVKQEVERRRLCIVLQVKFLLQTLLQHEHIRKDLLSARNPQLK
VAELHSLLELAELLGVKRDNNVSLEDQMDRAALVYLDLLEGNNKAVAGTTYKVLKAKLAT
LMDCGYFDCVPPPPTKSPKEVEDPMTKKTVSETASLSTLMMSNKKDVPSREFLNRHYLPD
TDPNGCRDTPVTPNWKAEFQAMKEQEPPDSWDMESDSTQPVIQKPWRGAAVLISKVPVTS
KKQNAEPKQRRAKSKRERDATAALRVDTPVEVFNSQSSLPKDPILRKQQLEDLMTKIRGS
FSFMQDSLLDGEGTSTNGHPRLGRHTSGSPSPLVQRDSRRSPVDLLPKTLHSTPLLSKLL
PVDDKPSLTNGDEGCLESCDLDLTTEDLAHVIAIDPCLLLSESETACPSPPAPPPLYRRE
SSISITLDEKTSARTPISESGKQSPCNGVVPPCTPTQGQPFSTPPSRRTLTMVPPVPFQT
MHSVFKVNAPLLPTVDFKSDIIPYSDSNGLCYVTTSTQTPPEFAPSEDEQLQSVNQSECL
VGSGGQIFLSPGQSGGTMGRSDQSYYRGSVRGIARGGKGLAHSYFRSSGGHRGGSFIPQA
HLYGARDIGYQHSYRRGGGNTGQRHNNSGWSDSSQVSSPDREGNYSLVDSAHGDSLQGVG
MDLTPQVTPHAPHTLMHVPMYPLPQHPQPLRVAFTAARTANYTPGTLDQPIAFDQLHSNL
GEMFNTNVGRFTCPANGTYVFLFHILKLAVNVPLYVNLMRNDEVMVSAYANDGAPDHETA
SNHSILQLYQGDQVWLRLHRGSIYGSSWKYSTFSGFLLYQD
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagctttctccatccccagaccgggatgtctctccttcacctgagtgctcagag
aaggggaggcaggggagccccaagattggctcccctggtgggctgagtcctctccagctg
gccctggcagcctccaccaccatctaccagggctacgagatttacatcgaggacggcctc
atctgcctcaagcacaagatccgcaacctggagaaaaagaagattaaattggaagactac
aggaagcgtttgcaacacggggaatcactcaatcaagaccagatagatgcagtggagaag
tatgacgaagtgatccacaacctgcagtttgcccaggagctgcacaagacccttggtggc
ctaacacaggaactgctaaaggcccagaagaaggcgttgcggaaggagcagatggtcaag
caggaggttgagaggagaaggctgtgcatagtgctgcaggttaagttcctcctgcagacc
ctgctgcagcacgagcacatcaggaaggacctcctctctgcccgcaacccccagctcaag
gttgcagagctacatagcctgcttgagcttgctgaactactgggggtgaagagggacaac
aatgtgagtttggaggatcagatggacagagcagccctggtctacctggacctgctggag
gggaataataaagctgtagctggaaccacctacaaggtcctgaaggctaagttggcgacg
ctgatggattgtgggtactttgattgtgtaccgccgccaccgaccaagagtcccaaggaa
gtggaggatcccatgaccaagaagacggtgtctgaaacagccagcctctctaccctaatg
atgtcaaacaaaaaagacgtgcctagcagagagtttcttaacagacactacctgcctgac
acagaccccaatgggtgtcgagacactcccgttactccgaactggaaggctgagttccag
gctatgaaggaacaggagccaccggactcatgggatatggagtccgactccactcagcct
gtaatccagaaaccatggagaggggcggctgtgttaatctcaaaagttccagttacctcc
aagaaacaaaatgccgaacccaaacagagaagagcgaagtccaaaagggagcgggacgcc
acagctgcacttcgtgtggacacccctgtggaggtgttcaactcccagtcttccttgccc
aaggaccccatcctgcgcaaacagcagctggaggacctgatgaccaagatcagaggctcc
ttcagcttcatgcaggattctcttctggatggagaaggaacatccactaacggccatcct
agactgggccggcatacctctggatccccctctccactcgtacagagagattcgaggaga
agcccagtggaccttctccccaaaacactgcattccactccattgctttctaaactcctc
cctgttgatgacaaacccagtctgaccaatggagacgagggttgtctagagagctgtgac
ctggacctgactacagaggacctggctcacgtcatagccattgatccatgtctgctgctg
tctgagagtgagactgcctgcccctctcctccagctcctcctcccctctaccgtagggag
tcctccatctccatcaccctggacgagaagacatctgctcggactcccatctctgaatcc
ggtaagcaatccccctgtaacggggtggtgcctccttgtacccccacccaagggcagccc
ttttcaacccctcccagcagacgtacactcaccatggtgccccctgttcccttccagacc
atgcattcggtcttcaaggtgaacgcccccttacttccgactgtagactttaaatccgat
attatcccctattcggactccaacggcctgtgctatgtcaccaccagcacccagacccca
ccggagtttgctccgtcggaggacgaacaactacagtcggtgaaccagtctgaatgtctg
gtaggtagtggtgggcagatcttcctgtcccctggccaatcgggtggcaccatgggccgt
tctgaccaatcatactacagaggatctgttagaggtattgcacgtggtggcaaggggctg
gcacactcctactttcgctcttctggtgggcacagaggaggaagcttcatcccccaggct
cacctgtacggagctcgggatattggctaccaacacagctacaggcgcggtggaggcaat
acaggacaaaggcacaataatagtggttggagtgattcttcccaggtgagcagcccagac
cgggagggcaactactccctggtggactccgcccacggtgactcgctgcagggtgttggc
atggacctcaccccccaggtgacccctcatgccccccacaccctgatgcacgtacccatg
tacccgctcccccagcatccccagcccctccgcgtggccttcacagcagcccgcacagcc
aactacaccccgggcaccctggaccagcccatcgcctttgaccagctccacagcaacctg
ggggagatgttcaacaccaacgtgggtcgtttcacctgcccagccaacggcacctacgtc
ttcctcttccacatcctcaagctggcggtcaacgtgccgctctacgtcaacctgatgcgc
aacgacgaggtgatggtgtctgcgtacgccaacgacggggctccggaccacgagacggcc
agcaaccactccatcctgcagctgtaccagggagaccaggtgtggctgcggctgcaccgc
ggctccatctatggcagcagctggaagtacagcacattctctggcttcctgctctaccag
gactga
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