Oncorhynchus nerka (sockeye salmon): 115133129
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Entry
115133129 CDS
T07952
Name
(RefSeq) signal peptide, CUB and EGF-like domain-containing protein 1 isoform X1
KO
K24468
signal peptide, CUB and EGF-like domain-containing protein 1/3
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
one04990
]
115133129
Domain-containing proteins not elsewhere classified [BR:
one04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
115133129
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FXa_inhibition
cEGF
Ephrin_rec_like
EGF_3
EGF_CA
EGF
CUB
hEGF
TNFR_ELAPOR1_6th
Orbi_NS3
Motif
Other DBs
NCBI-GeneID:
115133129
NCBI-ProteinID:
XP_029521901
LinkDB
All DBs
Position
LG8:complement(7195244..7315565)
Genome browser
AA seq
1042 aa
AA seq
DB search
MGSACFSWDVCLFFVLINTCEVMGNVGLAEADECSEGTDDCHIDALCQNSPKSFNCICKP
GYKGDGKQCEDMDECENEYNGGCVHECINIPGNYRCTCYDGFMLAHDGHNCLDVDECMDN
NGGCQQVCVNTMGSYECMCKQGFFLSDNQHTCIHRSDDGMNCMNKDHGCAHICRETPKGG
VACECRPGFELAKNQRDCSLTCNYGNGGCQHMCDDTDVGPVCGCHQKYALHSDSKTCIDL
CSVAPRKCRPEFHDDDERDEAAIESSEFNATSIADVDKRVKRRLLMETCAVNNGGCDRTC
KDTATGVRCSCPVGFTLQPDGKTCKDIDECQEAFNNGGCDHFCKNTVGSFECSCQKGHKL
LTDERTCQDIDECSFERTCDHTCVNYPGSFDCVCQEGYTLYGLTHCGDIDECSINNGSCE
HSCVNTQGGYECLCPPGQKLHWNKKDCTEAVKCLPDGKPAPRAQLSCDKRGGVEVCSLSC
PSNALFLADSENSYTLSCGVPVQPGKAPQKRNATTALLTCADTLPPPIKQKARFKVKDAK
CHLRPRNKEKHRETSKPSLQGGPLPCTDDCQVTFVNLKCDSSKKRRRGRKSPSKEVSHIT
AEFEMEMKEASGQCDCATSDSCNVECVRERMKQRLQSAMRTLRKSINKQQFYIQFSGTEY
EVAQKPALHVEQCSTGQVLRDGKCVSCGVGTYYSGDHDQCVVCPPGTYQDTMGQLSCEPC
PSTEGQGIAGAKNVSQCGGQCPAGQYSSDGFRPCNPCPLGSFQPEPGRVLCFSCGGGLMT
KYEGSVAFRDCEAKVHCAPGHHYNSSNHRCIRCPAGSYQSEFGQNYCITCPGNTTTDFDG
ATNVSHCKNQVCGGELGDFTGFIESPNYPGDYPSNVDCIWTINPPHKRRILIVVPEIFLP
IEDECGDVLVMRKSALPTSITTYETCQTYERPIAFTSRSRKLWIQFKSNEGNSGKGFQVP
YVTYDEDYQQLIEDIVRDGRLYASENHQEILKDKKLIKALFDVLAHPQNYFRYTAQESKD
MFPRSFIKLLRSKVTRFLRPYK
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgggaagtgcttgtttttcctgggacgtttgtttgtttttcgtcctcattaacacttgt
gaggtgatggggaatgttggactcgcagaagccgatgaatgctctgaaggcacggatgac
tgtcacattgatgccctctgccagaatagccccaaatccttcaactgcatctgcaagccg
ggatacaagggagacggcaagcagtgtgaagacatggacgagtgtgagaatgagtacaac
ggaggctgtgtccacgagtgtatcaacatcccgggcaactacaggtgcacctgctacgac
ggattcatgttggcccacgacggacacaactgtctggacgtggatgagtgcatggacaac
aacggaggatgccagcaggtgtgtgtgaacaccatgggaagctacgagtgtatgtgcaag
caaggcttcttcctcagcgacaaccagcatacctgcatccaccgctccgacgatggaatg
aactgcatgaacaaggaccacggctgcgcccacatctgcagggagactcccaagggcggc
gtagcttgtgagtgccggcccgggttcgagttggcaaagaaccaaagagactgttcattg
acgtgtaactatgggaacggaggctgccagcacatgtgtgacgatacggatgtggggccg
gtttgtggctgtcaccagaagtacgccctgcactcagacagcaagacctgcatcgatctg
tgctctgttgcaccccgaaaatgtcgcccggaatttcatgatgacgatgagagagatgag
gctgcaattgagagctctgagttcaatgccacgtcaatagctgatgtggacaagcgggtg
aaacggcggcttcttatggaaacctgtgcggtgaacaatggcggctgtgaccggacctgc
aaggacacggctacaggggtccgctgcagctgccccgtgggattcaccctgcagccagac
ggcaagacctgcaaagacatagatgaatgccaagaggcgttcaataatggcggctgtgac
catttctgcaaaaacacggtgggctcctttgagtgcagctgccagaagggccacaagctc
ctcactgacgagcgcacctgccaggatattgacgagtgttcctttgagaggacctgcgac
cacacctgcgtcaactaccctggcagcttcgactgtgtctgtcaggaaggatacactctg
tacggcctcacacactgcggagacatagatgagtgcagcattaacaacgggagctgtgaa
cacagctgtgtgaacacacagggaggctatgagtgtctgtgtccgcccggtcagaaactc
cactggaacaagaaggactgcaccgaggcggtgaagtgtttgcccgacgggaagccagcg
ccgcgcgcccaactcagctgtgacaagagaggaggggtggaggtgtgctccctctcctgt
ccgtccaacgcactcttcctcgcagactctgagaacagctacacactaagctgtggtgtg
ccggtgcaacctgggaaggcaccacagaagaggaacgccaccaccgccctgctcacctgt
gcagatacgttacccccgcccatcaagcagaaggctcgcttcaaggtcaaagatgccaag
tgtcacctgagacccagaaacaaggaaaaacacagagagacgtccaagccgagtctgcaa
gggggtccgctcccgtgtactgacgactgccaggtgacctttgtcaatctgaagtgtgac
tcgtccaagaagcggcggcgtggacgcaagtccccttccaaagaggtttcccacatcaca
gctgagtttgagatggagatgaaggaagcctcaggtcagtgtgactgtgcaacctcagac
tcgtgtaatgtggagtgtgtgagggagcgtatgaagcagaggttacagagtgccatgcgg
accctgaggaagtccatcaacaagcagcagttctatatccagttctctggtaccgagtac
gaggtggcccagaaacctgcactgcacgttgagcaatgcagcaccggacaggtcttacgg
gacggcaagtgtgtgagctgtggtgtggggacgtactatagtggagaccatgatcagtgt
gtcgtgtgtccccctggtacataccaggacacaatgggccagctgtcctgtgaaccctgc
cccagcaccgagggacagggcatcgctggggccaagaacgtctcccagtgcggaggccag
tgtccggctggtcagtattcgtcagatgggttccgtccctgtaacccctgtcccctgggc
tccttccagccggagcctggccgtgtactctgcttctcctgtggagggggcctcatgacc
aagtacgagggctctgtcgccttcagggactgtgaggccaaagtccactgtgctcctgga
caccactacaactccagtaaccaccgctgtatccgctgcccagccggtagctaccagtca
gagtttggacagaactactgcatcacctgccctggcaacaccaccaccgactttgacgga
gccaccaacgtctctcactgcaagaaccaggtgtgtggcggtgagctgggggactttaca
ggctttattgagtctcctaactaccccggggactacccgtccaatgtagactgtatctgg
accatcaacccccctcacaagagacgcatcctcatcgtggtgcctgagatcttcctcccc
atcgaagacgagtgtggagacgtgctcgtcatgaggaagagtgccctgcccacctccatc
acaacctatgagacgtgtcagacgtacgagcgaccaatcgccttcacctcccgctcacgc
aagctctggatccaattcaagtccaatgagggcaacagcggcaagggcttccaagtccct
tatgtcacctacgatgaggactaccagcagctgatagaggacattgtccgggacggcaga
ctctacgcatcagagaatcaccaagagatactgaaagataaaaaactgatcaaagccctg
tttgatgttctggctcacccccagaactacttcaggtacacggcacaggagtccaaagac
atgttcccccgctcgttcatcaagctgctgcgctccaaagtcacacggttcctacggccg
tacaaataa
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