Oncorhynchus nerka (sockeye salmon): 115133144
Help
Entry
115133144 CDS
T07952
Name
(RefSeq) solute carrier organic anion transporter family member 1C1-like isoform X1
KO
K08747
solute carrier organic anion transporter family, member 1C
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
115133144
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
one02000
]
115133144
Transporters [BR:
one02000
]
Solute carrier family (SLC)
SLC21/ASLCO: Organic anion transporter
115133144
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OATP
MFS_1
Kazal_2
Kazal_1
Sugar_tr
Motif
Other DBs
NCBI-GeneID:
115133144
NCBI-ProteinID:
XP_029521940
LinkDB
All DBs
Position
LG8:8341033..8398030
Genome browser
AA seq
730 aa
AA seq
DB search
MPRNFIRGTLPKENESHLCRMEPVARERGTTENGGSSSTREQRSSCSSLKMFLVALSFAY
FAKALSGSYMKSTITQLERRFDIPSYLTGVIDGSFEMGNLLVIAFVSYFGAKLHRPKIIA
MGCVLMSVGTFIIALPHFLIGRYKFETSIRSSVNSTNNLSPCPARLLSPSSQASGDPLSE
APSTGTVGCEGESNLSMWIYVFLGNVLRGIGETPVQPLGISYIDDFAREENAAFYIGCVQ
TIAVIGPVFGYLLGSLCAKIYVDIGFVNMESITISPGDARWVGAWWLGYLIAGVITLLSA
IPFWFLPRSLPIPPDRGPAQCTPEQTSFIKDSPLLEHKYQADEPAGFLEMAKDFIPTLKT
LLGNPVYFIYLCVTIIQLNSLIGMVTYKPKYIEQHYGQSASKANFLMGTINIPAVALGIF
TGGLLMKRLKLSIMGAAKFAFGTSLIGYFLSLFFFVMSCENVKVAGITLPYNRVGGVSYE
ERSVFSACNSDCVCSGRDWDPVCGENGITYVSPCLAGCQTSTGSGKNTVFSNCSCVVAAR
MSSGNLTASVGHCPHRDDCDRVFPYFLALSVITSFIISLGGTPGYMVLIRCIKPQLKSLA
LGFHTLSTRTLAGIPAPIYFGAVIDTTCLKWGQKRCGGRGACRIYNTTAYRIAYLGLTMG
LRTVSFLLCILGFVLLKRHLRREECRAHQVANGGAELEALRKEEVLASNSDQSLQTSTTD
YNNTERETRL
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgccaagaaatttcattaggggaactttgcccaaggaaaacgagagccatctgtgtagg
atggagccggtggccagggagagagggacaacagagaacggaggcagctcctctacgagg
gagcaacgctcctcctgctccagcctcaagatgttccttgtggccctatcgtttgcctac
tttgccaaggccttgtctggcagctacatgaagagcacaataacccagctggagaggcgc
tttgacatccccagttacctaacaggtgtcatcgacgggagctttgagatgggtaacctg
ttggtgatagcattcgtgagttactttggtgcaaagctgcatcggcccaagatcatagca
atgggctgtgtactgatgtcagtgggaacattcatcatcgctctgccacacttcctcatc
ggacgctataagttcgaaacgtcaatccgatcgtcagtgaattcaaccaataacctctct
ccatgtccagcgcgcctgttgtcaccctcgtcgcaagcttcgggtgacccgctttctgag
gcaccaagcacagggacagtaggttgtgaaggagagtccaacctctccatgtggatctat
gtgttcctggggaacgtcttacgagggatcggggagactccagtgcagccccttgggatc
tcgtatatagatgatttcgccagggaggaaaatgctgcattttacattggctgcgttcag
accatagcagtcattggtcctgtgtttggctatttactgggatccctgtgtgccaaaata
tatgtggacattggatttgtcaacatggagagtatcaccataagccctggtgatgctcgc
tgggtgggggcctggtggttaggttaccttattgctggggtaatcaccctgctttcagcc
atccccttctggttcctgccccgttccctgcccatcccgccagaccgaggcccagcccag
tgcaccccggagcagactagcttcatcaaagactcccctctcctggagcataagtaccaa
gctgacgagccagctggctttctggagatggccaaagatttcataccaacgttgaaaacc
ctcctggggaacccagtgtacttcatctacctgtgtgtgaccatcattcagctgaactct
ctcatcggcatggtaacctacaagcccaaatacatagagcaacattacggacagtccgca
tcaaaagccaatttcctgatgggtacaatcaacatccctgccgtggcgttgggaattttc
accggcggcctgctcatgaagaggctgaagctgagcatcatgggagcagccaagtttgcg
ttcggcacctctctgataggctacttcctatccctcttcttcttcgtcatgagctgcgag
aacgtcaaagtggctgggatcacgctgccctacaacagggtgggtggtgtatcgtatgag
gagcgctcagtattctcagcctgtaactccgactgtgtttgttcaggcagagactgggac
cctgtctgtggagaaaacggcatcacgtacgtctctccctgcctggctggctgccagacc
tccacaggatcagggaagaacacggtgttctctaactgtagctgtgtggtggcagcaaga
atgagcagtggtaacctgacagccagtgtaggccactgtcctcacagagacgactgtgac
cgtgtcttcccttacttcctggctctttctgtcatcacttcctttatcatctccctgggt
ggcacgccaggctacatggtcctcatcaggtgtatcaagcctcaactgaagtccttagct
ctggggttccatactctgtccacacgtacacttgcgggcatcccagcgcccatctacttt
ggggcggtcatcgacaccacgtgtctgaagtggggccagaagagatgcggagggagagga
gcctgtcggatatacaacactacagcatacaggatagcttacctgggtctgactatgggc
ctgaggacagtttccttcctgctgtgtatactgggattcgtgctgctcaaacgacacctg
cggagagaggaatgccgcgcccaccaagtggccaatggcggagcagaactggaggcactc
aggaaagaagaggtcctagcctccaactcggaccaatcgctacagacttccacaacagac
tacaacaacacagagagagagacacgcctgtga
DBGET
integrated database retrieval system
