Oncorhynchus nerka (sockeye salmon): 115133162
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Entry
115133162 CDS
T07952
Name
(RefSeq) receptor-type tyrosine-protein phosphatase zeta-like isoform X1
KO
K08114
receptor-type tyrosine-protein phosphatase zeta [EC:
3.1.3.48
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
115133162
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
one01009
]
115133162
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
one00535
]
115133162
Enzymes [BR:
one01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
115133162
Protein phosphatases and associated proteins [BR:
one01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
115133162
Proteoglycans [BR:
one00535
]
Cell surface proteoglycans
Others
115133162
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Y_phosphatase
Carb_anhydrase
fn3
Tc-R-P
PTP-SAK
DSPc
Y_phosphatase3
PTP-NADK
GUN4_N
PTPlike_phytase
Motif
Other DBs
NCBI-GeneID:
115133162
NCBI-ProteinID:
XP_029521965
LinkDB
All DBs
Position
LG8:complement(9315445..9360464)
Genome browser
AA seq
1668 aa
AA seq
DB search
MELTVSRVLIPIAQLLVSCHIVALTEAYFKAQRKFTDDIDWSYTGQLNQKIWGKRYPACN
NARQSPVDIDETFTQVRVEYQGLQLEGWEKNTPETTTINNDGNTVVLGLDGEYYVSGGGL
STRFRLGRMTFHWGRCNASSDGSEHSLNGLKFPLEMQILCYESGLYQSIDDAVRDGGRIA
ALAVLFETSLDNNDNYNTILEGVNSVNRFGKTGNVEPFSLLALLPNSTDKYYTYNGSLTS
PPCSETVEWIVFKHTVPISETQLEVFCEVMTMQQAGYVMLMDYLQNNFREQQQQFLGQVF
SSYTGTEEVLTPMCSSEPQNMQADAQNETTIMVMWERPRVVYDTTIDWYSVTYQRLQDQN
QPKHEYRTDGDQDVGAIIPGLLSNSSYVVQVVAVCTNGLTGRWSDQIIVDMPQEDPEIES
DPDNTEPEDILEPEDILEPVDQVPVDQNPVEESSTREGRQQIFPDLPSTTVASQVSSVPV
PPGTRDDQNRIDQDPVNQSRVDKPKKDQTRKDKKKQRIPPHRPFTSAASNGKSAMWVTMV
TDQPGFLIPISRTNSPPPVRRPITEEASLSRSPQQNRNQNRGSAAQKPDVSGIGLIPPEG
DMYTPPAGGMVVTDVYYEDVVNTTALESATTPSKTTLKKPLDDRVLSPVTARPKVTMKGH
DRGLVLTSRLSDNRVSTVTRATPIQQTPVSVTSTPSVPWIRSRTSSPSNSLSTAYGSSTT
SGLVKVLQHTTQPIFTVNTSFQRGTWVQQRTEPFNFPDLYPSVTHSEEDSLTPSQGGYTP
LHRSLSHSEETAALSPSVTPSEKDTILSPSVYPSEEEPRSDRQTVTSPVGQTDISGSGSG
LYGEGVNLGQDWLRGATLSPGTDLRSLTPASAMDPTEGETQGESSGDLGGLSSSFYFERE
TGSGVSEVDRAGANPQGSVVLGEASGSGDGEVQVEPGNSGIELHIPCIDLRVPILPDSRA
VEELRKEINNSSHESRVEMVGSVAERERRTVVPLAVVSTLTIICLLVLVGILIYWRNCFQ
MVDFYTEDTASPKVISALSSPLLLTTEEHEALSVKQFVKHVAELHQTNTFSKEFEIVTEC
YEEVQSCTVEMGITTDSSNHPDNKNKNRYINIMAYDHSRVKLLEEGKGGDYINANFVDGF
ERTRAYIAAQGPLMSGTEDFWRMVWQENVGVIVMITNLLEKGRRKCDQYWPMENQEEYGH
FLVTLKDTKTLAYYTLRTFTLRDTSQKASQRGRCAERTVVQYHYTQWPDMGVPEYTLPVL
SFVRASTQARTQDMGPVLVHCSAGVGRTGTYIVLDSMLQQIQDQGTVNILGFLKHVRTQR
NYLVQTEEQYVFIHDALVEAIVSRDTLVTSDLVHSYVSDLLTTGPSGRTRMERQFKLVSQ
RRARQADYAAALREGNDDKNRTSSLMPVERSRVCLSCPVEGESSDYINASYIMGYHKSRE
FILTQSPLPSTVSDFWRMVWDHNSQLIISLPDTHTAQREGEESCAYWPSKDQPISCEGFI
VSFSGEDHMCLANEERLVVHDFLLEATQDNYVLEVRQYMSPCWPNPDSPVSGTFQLLNII
TEDSRQREGTIVVHDRLGGSVAGLFCALATLAQQLEQQGSVDVYQVARMTNLMRPGVFSD
MEQYQFMYRAVLSLVDSQEDQRALQSPETNGSVLLGATTAAESLESLM
NT seq
5007 nt
NT seq
+upstream
nt +downstream
nt
atggaactgactgtatccagggtgctgattcccattgcgcagctcctggtttcctgccat
atagtggccttgacagaggcgtacttcaaggcccagaggaaattcacagacgacatcgac
tggtcctacacaggccagttgaaccagaagatctggggtaagaggtatccggcgtgcaac
aatgcccgtcagtcacccgtcgacatcgacgagacgttcacccaggtccgggtggagtac
cagggcctgcagctggagggctgggagaagaacaccccagagaccaccaccatcaacaac
gacggcaacacagtggtgctaggcctggacggggagtactatgtgagtggcggtggtctg
agcaccaggttcaggttggggaggatgacgttccattggggccgctgcaacgcctcctca
gacggatcagagcacagcctcaacggactcaagttccccctggagatgcagatcttgtgt
tatgagtcaggcctgtaccagtctatagacgatgcggtgagggatggagggaggatcgca
gcgctggctgtcctgtttgagaccagcctagataacaatgacaactacaacaccatctta
gaaggggtcaacagcgtcaacaggttcggtaagactgggaatgttgagcccttctctctg
ctggccctgctccctaactccactgataaatactacacgtacaacggttccctcacctcc
ccgccctgctctgagacggtggagtggatcgtcttcaaacacaccgtgcccatctctgag
acacagttggaggtgttctgtgaggtgatgaccatgcagcaggcaggctatgtgatgctg
atggactacctgcagaacaacttcagggagcagcagcagcagttcttgggccaggtcttc
tcctcctacactggaacagaggaggtcctcactcccatgtgcagctcggagcctcagaac
atgcaggcggatgcccagaacgaaactaccatcatggtgatgtgggagcgcccccgtgtg
gtgtatgacaccaccatcgactggtactctgtcacctaccagcggctgcaggaccagaac
cagcccaaacacgagtaccgcaccgacggagaccaggacgtgggggccatcatccccggc
ctcctgtccaacagcagctatgtggtccaggtggtagctgtctgcaccaatggcctgacg
ggacgctggagtgaccagattatagtggacatgccccaggaggacccggaaattgagtct
gatccagacaacacagaacctgaggatatattggaacctgaggatatattggaaccagta
gaccaggtcccagtagaccagaacccagtagaagagagcagcaccagagagggtcgccag
cagattttccctgacctgccctccaccactgttgcctcccaggtgagctctgtgccggta
ccaccaggcaccagagatgaccagaaccggatcgaccaggaccctgtgaaccagtccaga
gtggacaaacccaagaaggaccagaccaggaaggacaagaagaagcagcgtatccctccc
caccgccccttcaccagcgctgcctccaacggtaagagcgccatgtgggtcaccatggtg
accgaccagccggggttcctgattcccatctcccggacgaacagcccgccgcctgtccgc
cggccaatcacagaggaggcctcattgtcgcggtctcctcagcagaaccggaaccaaaac
cgtggttccgctgcccagaaacctgacgtttccggtatcggcctgatacccccagagggc
gatatgtacacccctccggcggggggcatggtggtcactgatgtttactacgaggacgtt
gtcaacaccactgccttagaatccgcaactacgccatctaaaacaacactgaaaaaaccc
ctggatgatagagttctcagtcctgttactgccagacctaaagtcacaatgaaaggacat
gacaggggcttggttttgacgtccaggctctctgataacagagttagcacagtgacaagg
gccacccctattcaacagaccccggtttctgtaacctcaaccccctctgtgccctggatc
agatccaggacttcaagtcccagcaactccctctccacggcctacggctcctccactacc
tcaggcctcgtcaaggtcttacagcacaccacccagcccatattcaccgtcaataccagc
tttcagagggggacttgggttcagcagcgcacagaacctttcaactttccagacctatac
ccctctgtcacccactctgaggaggattctctcacaccctcccaagggggctacaccccc
ttgcaccgttctctcagccattcagaagagacagcagccctcagcccgtctgtcaccccc
tctgaaaaagacaccatcctctccccctctgtctacccctctgaagaggagcccaggtcg
gacagacagacggtaacctctccggttggacagacagacatcagtggctcaggctctggc
ctctatggggaaggggtcaacctaggtcaggactggctgagaggggcgacactttcccct
gggacagacctacgttcactcacaccggcctcagccatggacccaacagagggagagaca
cagggagagagcagcggtgacttagggggtctttcctccagcttctactttgagagggag
actggtagtggtgtgtccgaggtggacagagcaggggccaatccccaggggtctgtggtg
ctgggggaggctagtgggtctggagatggagaggtccaagtggagcctggtaactctggt
atagagctgcatatcccttgtatagatctacgtgtccctattctccctgacagcagggct
gtggaggagctgaggaaagagatcaataacagcagccatgaatcaagggtagaaatggtg
ggaagtgttgctgaaagggagaggaggacagtggtccctctggctgtggtatccaccctc
accattatctgtctactggtcctggtgggcatcctcatctactggagaaactgcttccag
atggttgacttctacactgaagacaccgcctcacccaaagtcatctctgctctgtcttca
cctctgctgctcaccacagaagagcacgaggcgctgtcagtgaagcagtttgtgaagcac
gtggcagagctccaccagaccaacaccttctccaaggagtttgagattgtgacagagtgt
tatgaggaggtgcagtcatgcacggtggagatgggcatcactactgacagctccaaccac
ccagacaacaagaacaagaaccgatacatcaacatcatggcctatgaccacagcagagtc
aaactactggaagagggaaaaggtggagactacatcaatgctaactttgttgatggtttt
gagcgtacaagggcctacatcgcagcccaggggcccctgatgtctggaacagaggacttc
tggaggatggtgtggcaggagaatgttggagtcatcgtcatgatcaccaacctgttggag
aaggggcggaggaagtgtgaccagtactggccaatggagaaccaggaggagtacggtcat
ttcctggtgactctaaaagacaccaagaccctggcctactataccctgaggacctttacc
ctcagagacacctcacaaaaggcttcccagaggggacgctgtgctgagaggacggtggtc
cagtaccactacacccagtggcctgacatgggcgtgcctgaatacaccctgcctgtcctc
tccttcgtacgggcctcgacccaggccaggactcaggacatgggccccgtcctcgtacac
tgcagtgctggtgtggggaggacagggacctacatcgtgctggacagcatgttgcaacag
atccaggaccagggaacagtcaacatactgggcttcctcaaacacgtcagaacacagagg
aactacctggtacagacggaggagcagtatgtgtttatccatgatgccctggtggaggcc
atcgtcagcagggacactctggtgacctctgatctggtccactcctacgtctcggacctg
ctgaccactgggccctccggcaggacacgcatggagagacagttcaagctggtgagtcag
cgcagagccagacaggctgactacgccgctgccctgagagaaggaaacgatgacaaaaac
aggacctcctctctcatgccggtggagagatccagagtgtgtctgtcatgtccagtggaa
ggagaatcttcagactacatcaacgcttcctatatcatgggttaccacaagagcagggag
tttatcctgacccagtctcctctcccctccactgtctcggacttctggagaatggtctgg
gaccacaactcacagctcatcatctccctgcctgacacacacacagcacagcgtgagggg
gaggagtcgtgtgcgtattggcccagtaaggatcagccaatcagctgtgagggtttcata
gtgtcattctctggagaggaccacatgtgtctggccaacgaggagagactggtggtccac
gacttcttactggaggccacacaggataactatgtcctggaggtgcgtcagtacatgtcc
ccctgctggcccaacccagacagccctgtcagcggcaccttccagctgctcaacattatc
acagaggacagcagacagagagaaggaaccatagttgtgcatgaccggctgggtggctcg
gtggcggggctgttctgtgccctcgccaccctggcacagcagctggagcagcagggctct
gtggacgtgtaccaggtggcacggatgactaacctgatgaggcctggtgtcttcagcgac
atggagcagtaccagttcatgtatagggccgtgttgagtctggtggacagccaggaagac
cagagggccctacagtcccctgagaccaacggttcagttctcctgggggccaccactgca
gcagagagcctggagtccctcatgtaa
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