Oncorhynchus nerka (sockeye salmon): 115133181
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Entry
115133181 CDS
T07952
Name
(RefSeq) PR domain zinc finger protein 4-like
KO
K12463
PR domain zinc finger protein 4 [EC:2.1.1.-]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115133181
Transcription factors [BR:
one03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
115133181
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Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
Zn_ribbon_PRDM4
zf-H2C2_2
zf-C2H2
zf-C2H2_4
SET
zf-C2H2_jaz
C2CH-3rd_BIRD-IDD
NOA36
DUF7838
zf-C2HE
zf-met
zf-C2H2_16
DUF5810
DUF7479
Motif
Other DBs
NCBI-GeneID:
115133181
NCBI-ProteinID:
XP_029522016
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Position
LG8:10158986..10167331
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AA seq
818 aa
AA seq
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MNDMNLSPVGMDQLSVPSVSASHLGLPTSPTHNPITTTGMSVAIPSLGPSLGSLPSALSL
MLPMGPLGDRGVMCGLPERNYSLPPPPYPHLESSYFRHILPGILSYLADRPPPQYIHPSS
LNMDGTLSVSSQNPSGLDPYNGPGGPLEQGLVSLDSRQVGGQGDLHQGGGHEVQLDSTGL
NMESRVSSPMSPDRMGEDLANMEGVVGAENQQQLGGRGQNHEGLGRVESSGGVMPLHGPG
LELPVGMEPEHLGGRVGNSGGGGLGESLHSSGELNSGVVSVVLNQSQLEPVSLHGHSGMG
LESVNVSPITAEVSLGPENSLLLVNSTLQLEDSTSNKENMVTAFTIWCTLCERSYPSDCP
EHGPVTFIPDTPIQSRARLSLPRPLCLRISVADQPLGVFARDIIPPRTCFGPMVGQHCSN
VDLQDWPDKDTPQIWKMFHNNVLEFCIVTTDENECNWMMFVRKARTREEQNLVAYPDNGK
LFFCTSTEILPDQELLFYYTRDYCRQMGVPQVPEGQMCQCGKECQSFAELKSHLSSHNNQ
DHPHSHSPSQDHHQEHHQEGKLPSGTSSSSSSPWPCHSHSNNTNTSGSNTHSHRHSLERK
YKCSMCSRAFTTSTKLNVHFMGHVGMKPHKCEYCSKAFSDPSNLRMHLKIHTGQKNYRCN
VCEKSFTQKAHMASHMVIHTGAKNFKCDLCDRMFIRKQDLKQHMFTHTQERQIHCPKCDK
HFLRTNHLKKHMNSHEGRRDYICEKCEKGFLTKYHLTRHLKICKGPKTDRGAQEEEDEDE
DDDDDEDEEEVERLIDPDSREDCGLEGYDSEKALSPHN
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacatgaacctcagccctgttgggatggaccagttaagtgtgccctctgtgagt
gccagtcatctgggtctacccacctccccaacacacaaccccatcactacaacaggcatg
tctgtggctatacccagcctggggccctctcttgggtctctgccctctgctctgtcgctc
atgctgccaatgggtcctcttggtgacagaggggtcatgtgtggccttccagagaggaac
tactcattacctcctcccccctacccacacttggagagtagctacttcagacacatactg
ccaggtatcctgtcttacctggcagaccggcctccccctcagtacattcaccccagcagt
ctaaacatggatgggactctctctgtgtccagccagaacccctcagggctggacccttac
aatggccctggagggcctcttgaacaaggcctggtgtccctggactcccgtcaggttggt
ggccagggagacctccaccagggtgggggccacgaggtgcagctggactctacagggctg
aacatggagtcccgggtcagcagccccatgtccccagacaggatgggagaggacctggcc
aacatggagggggtggtgggggctgagaaccagcagcagctgggagggagaggccagaac
catgagggcctgggaagagttgagtcctctgggggcgtgatgcccctgcacgggcctggc
ctggagcttcctgtggggatggagccagagcacctagggggccgggtggggaactcaggg
ggaggcggtctgggggagtctttacacagctcaggggagctgaactctggggtggtgagt
gtggttctcaaccagtcccagctggagcctgtgtccctccatggtcattcgggcatgggc
ctagagtcggtgaacgtgtcccccatcacggcagaggtgtccctggggccagagaacagc
ctgttgctggtcaactccaccctgcagctggaggactccacctccaacaaggagaacatg
gtcactgccttcaccatctggtgtacgctgtgtgagcggtcgtatccctccgactgccca
gagcacggcccagtcacctttatcccagacacgcccatccagagcagagcccgtctgtct
ctgcctcgcccgctctgcctccgcatctctgtagctgatcagcctttaggagtgtttgcc
cgagacatcatacctcccaggacctgctttgggcccatggtgggtcagcactgtagcaat
gtagacctgcaagactggccagacaaggacacccctcagatatggaagatgttccacaac
aacgtgctggagttctgtattgtgaccacagatgagaatgaatgcaactggatgatgttt
gtccgcaaggcacggaccagagaggagcagaacctggtggcctaccctgacaacgggaag
ctgttcttctgcacgtccactgagatcctcccagaccaggagctgctcttctactacacc
agggactactgcaggcagatgggggtccctcaggtcccagagggccagatgtgccagtgc
ggcaaagagtgccagtccttcgccgagctcaagtcccacctgagcagccacaacaaccag
gaccacccccattcccacagccccagccaggaccaccaccaggaacaccatcaggagggc
aagctgcccagcggtacctccagctcctcctcatccccctggccctgccactcccactct
aataacacaaatacctctggctccaacacacactcacacagacactcgcttgagagaaag
tacaagtgcagtatgtgctcgcgggcgttcaccacgtccactaagctcaacgtgcacttc
atgggacatgtggggatgaagccgcacaagtgtgaatactgcagcaaggccttcagtgat
ccgagcaacctaaggatgcacctcaagatacacacaggtcagaagaactacaggtgtaat
gtgtgtgagaagtcgttcactcagaaggcccacatggcgtctcatatggtgattcacacg
ggggccaagaacttcaagtgtgacctgtgtgacaggatgttcatcaggaagcaggacctc
aagcagcacatgttcacacatacacaagagcgacagatccactgccccaagtgtgacaaa
catttcttgaggaccaaccacttgaagaagcacatgaactcccatgagggtcgccgggac
tacatctgtgagaagtgtgagaagggcttcctcaccaaataccacctcaccagacacctc
aagatctgcaaaggccccaagactgaccgaggggcccaggaggaggaggatgaggatgaa
gatgatgatgatgatgaggatgaagaggaagtagagagactaatagatccagatagcaga
gaggactgtgggttagagggatacgattctgagaaagcgttgtcgccacacaattga
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