Oncorhynchus nerka (sockeye salmon): 115133220
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Entry
115133220 CDS
T07952
Name
(RefSeq) cadherin-related family member 5-like isoform X1
KO
K16505
cadherin-related family member 5
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
one04515
]
115133220
Cell adhesion molecules [BR:
one04515
]
Cadherins
Cadherin related
115133220
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Motif
Other DBs
NCBI-GeneID:
115133220
NCBI-ProteinID:
XP_029522074
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All DBs
Position
LG8:11635526..11663264
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AA seq
823 aa
AA seq
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MLTPWGLFLCQLVINTSYHVIKASLCLGGSDIFATVSENSPVGEFIANLSIIGDPTGVNS
IRLCLTGENANWFYLEGRTIRLNSSVLRVLDRERQGSVLMAALTCYEDDIIQSEYRVIVE
ILNENDNKPKFFEKTIQPRYISELTAVNSVVFTVKAIDADGDTITYIIDRALPDASYFRI
DLPNSGKVILDKPLDYETKTQLQLVIYAVETNTKEWYNTSASLTVHVKDGDDQYPQFLPC
TPISQDNKHTVVCTNPVYTVNITEKDQDMLLNFSPGPIHAEDGDRSLDTPLLYSILSGAD
KNRFQIDNRTAEITLTRRVETRHLTPTFRLRIMASQLNDPKKYSVATALVRVLAENRFPP
LFNRTTYKGFIVENSSPATLVSTYGNEVLLIQAIDQDFVDGVNPKMHYSLPPTSATTALY
HITQEGVIIAKTDRLRPFERHFLEVVAMDEESGEVAKASVDIELLQRGQPVPRTPFGEER
LFRDMDVRMAGGIMGGMLLLLVAILFLMIRWAKRRRRRDPARRGAVILGKHPNVSLRGFQ
MVNSGRPMIPLIEEVCYQNKGFSIDYDASGGSGSLYGRHGVYTRKQSLIPPQPRSHSSHP
DCGSRTVTGDMLPILVMPEPLVKDLTPTLISNGRKAEISMGAATKDKKEKERNKQRDMEK
EEEGEWEKEWERAVDTKEKRYSEGERTDKSRDVVGASSGASSETADVSEASEDQTNTEKP
QSHRMKTHQIKDPKDGHKSTSEEESETENQYKNMHSVICLSDDYDRAMEDEAGARSRCSS
IRTSTGESQRKGSTKQTGDQANRRPSNPQMHHSDSHSGLQTHI
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgttgaccccatgggggctgttcctctgccagctggtaataaacacgtcctaccatgtc
atcaaagccagcctctgcctgggtgggtcggacatctttgcaacggtgagcgagaacagc
cccgtaggagagttcatagcgaacctcagcatcatcggggaccctacaggagtcaatagc
atccgcttgtgcctcaccggagagaacgccaattggttctacctagaagggagaaccatc
aggctaaactcatccgttttaagagtcctggatcgagagcgccagggatctgtattgatg
gcagcattaacatgttatgaagatgacataatacagagtgaatacagggtcatagttgag
atcctgaatgaaaacgacaacaaaccaaagttctttgagaagactatacaaccacgttac
ataagtgagctcactgcagtcaactctgtagtcttcaccgtcaaggccatcgatgctgat
ggagacaccatcacctacatcatcgacagagccttgcctgatgccagctatttcaggata
gacctacccaacagtggtaaagtgatcctggacaagccattggactatgagaccaaaacc
cagctgcagctagtcatctacgctgtggaaaccaacaccaaggagtggtacaacacttcc
gcctctctgactgtgcacgtgaaggacggggacgaccagtaccctcagttcctaccgtgc
acacccatctcccaggacaacaaacacacggttgtctgcaccaatccagtctacacagtc
aacatcacagaaaaggaccaggacatgttactgaatttctctcctggtccaattcatgcc
gaagatggagacagaagccttgatacgcctttgctctactccattctctcaggtgctgac
aaaaacaggtttcagattgacaaccgaacagcagagatcacattgactagacgggtggaa
accagacacctgacacctacattccgactacgcatcatggcatctcagctgaatgaccca
aagaagtacagtgtggcgacagcgctggtccgggtgctagcagagaaccggttccctccc
ctcttcaacagaaccacgtacaagggcttcatcgtcgagaactccagtcctgccacgcta
gtctccacctatgggaacgaggtgcttctcatccaagccatagaccaggactttgtagat
ggggtgaatccaaaaatgcattactctctcccgcccacatcagccacaactgcactgtac
cacatcacccaggaaggggttatcatcgctaagaccgaccgcctacgacccttcgagagg
cacttcctagaggtggtcgctatggatgaggaatcaggtgaggttgctaaagcctcagtc
gacatagagctgctacaaagaggccagccagttccacggacacccttcggagaagagcgg
ttgttcagagacatggatgtgaggatggctggcggtatcatgggtgggatgctgctgctg
ttagtggccatcctgttcctgatgatccgatgggccaagaggagacggagacgggacccg
gccagacgaggggctgtcatcctggggaagcaccccaatgtgagcttaagggggttccag
atggtgaactcgggccggcccatgatccccctgattgaggaggtctgctaccagaacaaa
gggttcagcatagactacgatgcctcgggaggttccggaagcctctatgggagacatggg
gtctacaccaggaaacagtcactgatcccaccacaaccacgctcccacagcagccatcca
gactgcggctccaggaccgtaacaggcgacatgctgcctatactggtgatgccagagccc
ttggttaaagacctcactcccaccctcatctccaatggcaggaaagctgagatcagcatg
ggggctgcgacaaaagacaagaaggagaaggagagaaataagcagagggatatggagaag
gaggaggagggggaatgggagaaggagtgggaacgcgccgttgacacaaaagagaagaga
tattccgagggggaaaggacggataagtcaagagatgttgtgggtgcttctagtggtgct
tctagtgagaccgcagatgtaagcgaggcctctgaggaccaaacaaacacagaaaagcct
cagagtcacaggatgaaaacacaccaaatcaaagatcccaaagacggacacaaaagcact
tccgaagaggagtctgagacagaaaaccaatataagaatatgcactcggtgatctgtctt
tcagacgattatgacagagccatggaggatgaagctggagccaggtcccgttgctccagc
atcaggacgtcgacgggggaatcgcagcgcaagggctcaacgaaacaaaccggcgaccaa
gcaaacagacgaccaagtaacccacagatgcaccattcagactcacactctgggcttcag
actcacatttag
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