Oncorhynchus nerka (sockeye salmon): 115133238
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Entry
115133238 CDS
T07952
Name
(RefSeq) solute carrier organic anion transporter family member 1C1-like
KO
K08747
solute carrier organic anion transporter family, member 1C
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
115133238
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
one02000
]
115133238
Transporters [BR:
one02000
]
Solute carrier family (SLC)
SLC21/ASLCO: Organic anion transporter
115133238
SSDB
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Paralog
GFIT
Motif
Pfam:
OATP
MFS_1
Kazal_2
Kazal_1
SBF
Jiraiya
Motif
Other DBs
NCBI-GeneID:
115133238
NCBI-ProteinID:
XP_029522124
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All DBs
Position
LG8:complement(11997184..12005482)
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AA seq
813 aa
AA seq
DB search
MGDPAEDRGKLTSQQELCVSDKQATKRPCCSTLKLFIVALSFAYFSKVLSGTYMKSAITQ
IERRFDLSSSLIGLIDGSFEMGNLLFLAVVSHFGAKMHRPRLIAVGCFLMAVGSFLTGLP
HFFMERYTFDTVIQGSMNDSVSITPCLDLLNQTDIPEIQRETPSDINTDCVRDSSSHMWI
YVFLGNALRGIGETPVTPLGISYIDDFAKAENSAFYIACLQTITLLGPMFGFLLGSLCAS
LYVDIGYVDLETVTITPKDARWVGAWWLGFLVSSVIMLLSGIPFWFLPRSLPKQGEENKL
PPSPPTQDGTENNDATSHQAMALAEIAKGFIPSLKKLLSTPAYFLLLCGSLLKFNSFIGL
LTFKAKYMEQQFGQSAARANFLIGVLNLPVVAVGIFLGGLLMKRYKLGVVSGAQLSFVTS
FMAYLLLLLQFGTKCDNVQVAGLTVSYNGTPGVVYNGNLWSECNRDCSCLAGEWDPVCSD
NGITYTSPCLAGCSSSTGYGKNTVFHNCSCVLSSSAPEGSMSVILGQCPRSRECSRSFTS
YMAVSVLSSFINSLGTTPGYMVIIRCIKPELKSLALGIQTLVMRTLGGIPAPVYFGALID
STCLRWGIKKCGGRGACRMYDSDMYRVIFLGLITCLSGSSYFFIIAVIALLRIQFRKEGD
TTTGQPPHSSLAIELQTPPKTTEPLNTPKEIEVHTPKEGEREGEPEQDNSLQTQKDTEVE
EELSNTQVERTSDLSLTHSQKEEVEEVFSRREEDVTPDAIPPAPVSKEDEKPSDQANEQA
EGEVIVIHTHREKDNPHNLLAEMNHTEVEGLQG
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgggcgatccagcggaggacagagggaagctgaccagccaacaggagctatgtgtttct
gacaagcaggccaccaaacgcccctgctgttccacactcaagctgttcatcgtggccctg
tcattcgcctacttctccaaggttctgtcagggacctacatgaagagtgccatcactcag
atagagagacgctttgacctgtccagctctctcatcggactcatagacggcagctttgag
atgggtaacctgctgttcctggctgtggtcagccattttggcgcaaagatgcaccggccc
aggctcattgctgtgggctgtttcctcatggctgtaggatcattcctcacaggcctgcca
cacttcttcatggaacgctacacatttgacacagtcatccaaggctcaatgaatgacagt
gtcagtataactccatgtctggatcttctaaatcagacagacatccctgagatccagagg
gagacaccttcggacatcaacacagactgtgtgagggactccagctcccacatgtggatt
tatgtgtttctgggaaacgctctgaggggcataggagagacccccgtcaccccactaggc
atctcctacatcgacgacttcgctaaagctgaaaactctgctttttacattgcatgtcta
cagaccatcacactgctaggtcccatgttcggtttcctgctggggtcgttgtgtgccagt
ctctatgtagacattggatatgtcgatctggagactgtgaccatcactcccaaggatgcc
cgctgggtgggggcctggtggctgggcttcctggtctcctctgtcatcatgctcctgtca
ggcatccccttctggtttcttccccgctcgctgccaaagcagggagaggagaacaagctg
ccccctagcccccctactcaggatgggacagagaacaacgacgccacctcacatcaggcc
atggcgctggctgaaattgcaaaaggtttcataccatcactgaagaagctgctgagcaca
ccagcgtactttctgcttctgtgtggcagcctcctgaagttcaactccttcattggcctg
ctcacgttcaaagccaagtacatggaacagcagtttggccaatcagcagccagagccaac
ttcctcattggtgtgttgaacctgcctgtggttgccgtggggatattcctgggcggtcta
ctgatgaagaggtataagcttggtgttgtgtctggagcccagctgtctttcgtcacctcc
ttcatggcctacctcctcctccttctgcagtttggcactaagtgcgacaacgttcaggtg
gctgggctgaccgtgtcctacaatgggacccctggtgtagtgtacaacggcaacctgtgg
tcagagtgtaacagagattgctcctgcttggctggggagtgggaccctgtgtgttcagac
aacggcatcacgtacacctccccctgcctcgcaggctgctccagctctacaggatacggc
aagaacacggtattccacaactgtagctgtgtgctgtcctcctctgcaccagagggcagc
atgtcagtaatattaggccagtgtcctcgcagcagagagtgcagccgcagcttcacttcc
tacatggctgtgtccgtactcagctcctttatcaactcccttgggaccacgcctggatac
atggtcatcatacggtgcatcaagcccgagctaaaatccctggcgttaggtatccaaact
ttggtgatgagaaccctagggggtattccagcaccagtgtacttcggggctttgattgac
tcaacatgtttgaggtgggggatcaagaaatgcgggggcagaggtgcctgtcgaatgtat
gactctgatatgtacagggtgatcttccttggcctcatcacatgtctcagtggctcctcc
tactttttcatcatcgcagtcattgccctgctgaggatacagtttaggaaggagggggac
accacaacgggacagcccccacactcatcgctagcgatcgaacttcagactcccccaaaa
accactgaacccctcaacacaccgaaggaaattgaggtgcacacccctaaagagggagaa
agagagggagagccggaacaggataactccctccaaactcaaaaagacacagaggtggag
gaggaactatccaacacccaagtagagagaacgagtgacctcagtctaactcacagccag
aaagaggaggtggaagaggtgttcagtagaagagaggaggatgttactccagatgccatc
cctcctgctcctgtgagcaaggaagacgagaagccttctgatcaggccaacgagcaggcg
gagggagaggtcatagtgattcacacccacagagagaaagacaacccacacaacctcttg
gctgagatgaaccacacagaggtagagggccttcagggctag
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