KEGG   Oncorhynchus nerka (sockeye salmon): 115133259
Entry
115133259         CDS       T07952                                 
Name
(RefSeq) lysine-specific demethylase 5A-like isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
one  Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:one00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:one01009]
    115133259
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:one03036]
    115133259
Enzymes [BR:one01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     115133259
Protein phosphatases and associated proteins [BR:one01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     115133259
Chromosome and associated proteins [BR:one03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    115133259
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel ARID PHD zf-C5HC2 JmjN PHD_5
Other DBs
NCBI-GeneID: 115133259
NCBI-ProteinID: XP_029522164
LinkDB
Position
LG8:complement(14026268..14114617)
AA seq 1778 aa
MSLTDVNTIDLKHKYYWLFKENIICDFIMSDFAEFVPPPECPVFEPSWEDFSDPLGFINK
IRPIAERTGICKIRPPEDWTPPFACDVRNFRFTPRVQRLNELEALTRVKLNFLDQIAKFW
ELQGSRLRFPHVERKILDLYQLSKIVSSEGGFDTVCKEKRWSKVGSRMGFPPGKGMGSLL
RSHFERILYPYELFQSGATLTGIHHLYEEGDDEEVQDEGMGEEEEEDEEDRERDSLSDGT
QNKDCLLPERRSRRLKSEVGDERENKEPKTMQIFGSGPKMVGLEIVPAEDDGFNKKQRHL
KAQAFAIKMRPHKETLEVNFIPQIDLYMCLMCGRGDEEDRLLLCDGCDDSYHTFCLIPPL
QDVPKGDWRCPKCVAEECSKPREAFGFEQAVREYTLQSFGEMADHFKSDYFNMPVHMVPT
ELVEKEFWRLVSSIEEDVIVEYGADISSKEVGSGFPVRDGKRRLLRDEEEYANSGWNLNN
MPVLEQSVLTHINVDISGMKVPWLYVGMCFSSFCWHIEDHWSYSINFLHWGEPKTWYGVP
AHAAEQLESVMKKLAPELFDSQPDLLHQLVTIMNPNVLMEHGVPVFRTNQCAGEFVVTFP
RAYHSGFNQGYNFAEAVNFCTADWLPMGRQCVAHYRRLHRYCVFSHEELLCKMAADPESL
DVELAAAVFREMGEMMEEETRLRQALQEMGVLSSEQEVFELVPDDERQCQKCKTTCFLSA
LTCPCSPEHLVCLHHAKELCDCPLGIKCLRYRYHLEEFPSMLYGVKSRAQSYDTWAKRVT
DALAADHKNKKDLIELKVLLEDAEDRKYPENSLFRRLRELVKEAETCSSVAQVLLSRKQR
HSTRQHPECSRTRNKLTVEELKVFVEQLFKLPCVIGQARQVKELLENVEDFHERAQVALA
DELPDSSKLQALLDLGGGLDVELPELPRLKQELQQARWLDEVLVTLAEPHRVTLELMKRL
IDSGVGLAPHHAVEKAMAELQEILTVSERWEDKACACLQARPRHSMLTLETIMIEARNIP
AYLPNVLALRDALHKAKEWSAKVDAIQVVSRRTCGSNYAYLEQLESLLARGRSIPVRLDP
LPQVESQVASARAWRERTARTFLKKNSTYTLLQVLSPRVDIGIYGNSKRKRRRVKELLEK
ERGLDLEGLSDLDESYEDACDPAIVVAAFKSKEQKEVEAIHSLRAANLAKMAMSDRIEEV
KFCLCRKTASGFMLQCELCKDWFHGACVPLPKAGSQKKLMGSAGCQGNSKEAKFLCPLCQ
RSRRPRLETILSLLVSLQKLPVRLPEGEALQCLTERAMGWQDRARQALATNELSSALAKL
SVLSQRMVEQAAREKTEKIINAELQKAAANPDLQGHIQTFQQAGFSRAASPRQSVDYDDE
ETDSDEDIRETYGYDMKDPGEVKPYLFCDEEIPVKSEEVVSHMWPTTPSFCAEHAYSSAS
KSCPQNQSTPRKQPRKTPLVPRSLEPPVLELSPPAKAQLEELMMVGDLLEVSLDETQHIW
RILEATHPPSEERFLQVMEHEDSQFEKPMKIKMKDSEKKRKRKLEKAEHQLLMAAVSGVG
DMMRSPKSSKDPKLSLLDPLGKPKKKKLKLNPDKNRELKQLSKRLAKEDKERKRKDKAVV
KSEAVREGLEKRKEKKILDIPSKYDWSGAEDSNDENAVCASKNCARPCKDKVDWVQCDGG
CDEWFHQVCVGVTCEMAENEDYICIDCTRKSSILSRGVVGSLGRSMSIGGGGVTAVVKLE
RVCEELEAPVYSGLSQIIMPPSTSLPQQQQQPDTLESS
NT seq 5337 nt   +upstreamnt  +downstreamnt
atgtcactcacagatgtcaacacaatagatttgaaacacaagtactattggctttttaaa
gaaaatataatttgtgatttcatcatgtctgattttgctgaattcgtaccccctcccgag
tgcccagtttttgagccgagttgggaagatttttcggatccactaggatttataaacaag
attcgacctattgcagagagaactggcatctgcaaaattcgaccgccagaggactggaca
cctccttttgcctgcgacgtgcgcaacttccgctttactcccagagtccagagactcaat
gaattggaggccctcactcgggtcaagctcaacttcctggatcagattgccaaattctgg
gaactgcaggggtccaggctgcgcttccctcatgtggagaggaagatcctcgatttgtac
cagctcagcaaaattgtctcctccgagggaggctttgataccgtgtgtaaggagaagaga
tggtccaaggtgggcagcaggatgggtttccccccagggaagggtatgggctctctgctg
cggtcccacttcgagaggatcctctacccctatgagctcttccagtctggagccacgctc
actggtatccaccatctgtacgaggagggagatgacgaagaggtgcaggacgagggcatg
ggggaagaggaagaggaggatgaagaggaccgagagagggacagcctgagtgacgggact
cagaacaaggactgcctgctccctgagcgacgctcccgccgcctgaagtccgaggtcggt
gatgagcgggaaaacaaagagcccaagaccatgcagatctttggcagtggtcccaagatg
gttggtttagagattgtaccggctgaagacgatgggttcaataagaagcagcgtcacctg
aaggcccaggccttcgccattaagatgcgaccacacaaagaaaccctggaggtcaacttt
ataccccagattgacctgtacatgtgcctgatgtgtgggcggggtgacgaggaggaccgc
ctcctgctgtgtgacggctgtgatgacagctaccacaccttctgtctgattccgccccta
caggatgtccctaagggggactggcgatgccccaaatgtgttgctgaggagtgcagtaag
ccgcgggaggcgtttggctttgagcaagccgtgagggagtacaccctccagagctttgga
gagatggctgaccacttcaagtcagactacttcaacatgcctgtgcacatggtgcctaca
gagctagtggagaaggagttctggcgtctggtgagctccatcgaggaggatgtcattgtg
gagtacggagctgacatcagctctaaggaggtgggcagcggcttccccgttagggatggc
aagagacggcttctgagagacgaagaggagtatgccaattcaggctggaacctgaataac
atgccagtcctggagcagtcggtccttacccacataaacgtggatatctctggcatgaag
gtgccctggctctatgtgggcatgtgcttctcctccttctgctggcacatcgaggaccac
tggagctactccatcaacttcctgcactggggggagcctaagacttggtatggtgtcccg
gcccacgcggcagagcagctggagtcagtgatgaagaagctggccccagagctgtttgac
tctcagcctgacctgttgcaccagcttgtcaccatcatgaatcccaacgtcctcatggag
cacggagtgcccgttttccgcaccaaccagtgtgcgggggagtttgtggtgacctttccc
agagcctaccacagtggcttcaaccagggatacaattttgctgaagctgtcaacttctgt
actgcagactggctcccgatgggtcgtcagtgtgtggcccactaccggcggctccaccgc
tactgtgtcttctcccacgaggagctgctgtgcaagatggctgccgaccccgagagcctg
gatgtggagctggctgctgcagtcttcagagagatgggagagatgatggaggaagagaca
cggctcagacaggccttgcaggagatgggtgtgctgtcctcggagcaggaggtgtttgag
ctggtccctgatgacgaacggcagtgtcagaagtgtaagaccacctgtttcctgtcagct
ctgacgtgtccctgcagcccagagcatctcgtctgtctgcaccacgccaaggagctatgt
gactgtcccctgggaatcaagtgtctacgctaccggtatcatctggaggagtttccctcc
atgttatatggggtgaagtccagagcccagtcctatgacacctgggccaagcgtgtcact
gatgccttggctgctgaccacaagaacaagaaagacctgatagagttgaaggttcttctg
gaggatgcagaggacaggaagtatccagagaacagtctgttccgtcggctcagagagctg
gtgaaggaggccgaaacctgctcttccgtggcccaggtactgctcagccgcaagcagaga
cacagtaccaggcagcatccagagtgcagcaggactcgtaacaagctgacagtggaggag
ctgaaagtctttgtagagcagctgttcaaactgccctgtgtcattggacaggctcgacag
gtcaaagagttactagagaacgtggaggacttccatgagagagcccaggtagccctggct
gacgagctgcctgactcctccaagctgcaggccctgctagacctgggtggaggtctggat
gtggaattacctgagctgcccaggctcaaacaggagctgcagcaggcccgctggctggat
gaggtgcttgtgacgctggcagagccccaccgtgtgaccctggagctgatgaagcggctg
atagactctggggtggggctggcaccacaccatgctgtggagaaggccatggctgagttg
caggagatactcactgtgtcagagagatgggaggacaaggcctgcgcatgcctacaggcc
aggcctcggcacagcatgctaaccctggagaccatcatgatagaggccaggaacatacca
gcctacctgcccaacgtcctggccctccgagatgctctgcacaaggccaaggagtggagt
gccaaggtggatgccattcaggtagtgtcgcgtcgcacgtgtggcagtaactatgcctac
ctggagcagctggagagcctgctggcgaggggtcgctccatccccgtccggctggacccc
ctgcctcaggtcgaatcccaggtggcctcagcccgcgcctggagggagaggactgcacgc
accttcctcaagaagaactcaacctacaccctgctacaggtccttagtccgcgtgtggat
attggtatctacggcaacagcaagagaaaacgcagacgagtcaaggagctccttgagaag
gagaggggtctggacctggagggtctcagcgaccttgacgagagttatgaagatgcctgt
gacccggccatcgttgtagcggcattcaaatccaaggagcagaaagaagttgaggccatc
cactccctccgagctgccaacctggctaagatggccatgtctgaccgcatcgaggaggtc
aagttctgtctgtgtcgtaaaactgccagcgggtttatgttgcagtgtgaactgtgcaaa
gactggttccacggagcctgcgtgccattaccgaaagcgggctcgcagaagaagctcatg
ggctcggccgggtgccaaggcaacagcaaggaggccaaattcctgtgcccgttatgccag
cggtcacgtcgcccgcgtctggagaccatcctgtctctcctggtgtccctccagaagctg
ccggtgcgtctgcctgaaggggaggccctacagtgcctgacggagagggccatgggctgg
caggaccgcgccaggcaggccctggctacaaacgagctgtcctcggccctggccaagctg
tcggtgctcagtcagaggatggtagaacaggctgcccgggagaagaccgagaagatcatc
aacgccgagctgcagaaggctgccgcaaaccctgacctgcagggtcacatccagacgttc
cagcaggcagggttcagcagggcagcgtcaccacgccagtctgtcgactacgatgacgag
gagacggactctgacgaggacatcagggaaacatatggctacgacatgaaggacccaggt
gaagtgaagccgtacctgttttgtgatgaggagatccctgtcaagtcagaggaagtagtc
agtcacatgtggcccaccacaccctctttctgcgctgaacacgcctactcctctgcatcc
aagtcctgccctcagaaccagagtacccccaggaagcagcccaggaagacgcccctggtg
cctcgctccctggagccccctgtgctggagctgtcccccccggccaaggcccagttggag
gagctgatgatggtgggggacctgctagaggtgtccctggacgagacccagcacatctgg
aggatcctggaggccacacaccctccctctgaggagaggttcctacaggtcatggagcat
gaggattctcagtttgagaagccgatgaagatcaagatgaaggactctgagaagaagagg
aagaggaagctggagaaggcggagcaccagcttctcatggcagctgtctccggggtcgga
gacatgatgcggtcccccaagtcctcaaaggatccgaaactgagcctcttagacccgctg
gggaaacccaagaagaagaagctgaagctgaacccggataagaaccgtgaactgaaacag
ctgtccaagcgcctggctaaagaggataaggagaggaagaggaaggataaagctgtggtc
aagtctgaggctgtcagggaggggctggagaagaggaaagagaagaagatcctggatata
ccgtcgaaatatgactggtctggagctgaggactccaatgatgagaacgctgtctgtgcg
tccaagaactgtgcgagaccctgcaaggacaaggtggactgggttcagtgtgacggcggc
tgtgacgagtggttccaccaggtgtgtgtgggtgtgacctgcgagatggccgagaacgag
gactacatctgcatcgactgcacccgcaagtcgtctatcttgagtcggggcgtagttgga
agtttgggaagaagcatgagcataggaggaggaggggtgacagcagtggtgaagttggag
cgtgtttgtgaggagctggaagcaccagtctacagcgggctgagccagatcattatgccc
ccctctacctccctcccccagcaacagcagcagccggatactctggagagcagctag

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