Oncorhynchus nerka (sockeye salmon): 115133340
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Entry
115133340 CDS
T07952
Name
(RefSeq) dynactin subunit 1-like isoform X1
KO
K04648
dynactin 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04814
Motor proteins
one05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
115133340
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
115133340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115133340
03036 Chromosome and associated proteins [BR:
one03036
]
115133340
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
one04812
]
115133340
Membrane trafficking [BR:
one04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
115133340
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
115133340
Cytoskeleton proteins [BR:
one04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
115133340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
Motif
Other DBs
NCBI-GeneID:
115133340
NCBI-ProteinID:
XP_029522324
LinkDB
All DBs
Position
LG8:19151857..19178009
Genome browser
AA seq
1248 aa
AA seq
DB search
MSADGGGKPAKVGSVVEVIGKGQRGTVAYVGATLFATGKWVGVILDEPKGKNDGTVQGKR
YFQCDENCGIFVRQSQIQLVEDGSSATSPDTPEAATAKFLPKQKDIPETPKSVKQMPIPK
KTPRVLATPASGLSSSLSREDVSEGSLSSKGALGAPVVPLPSGTPTTPGAPPPATPSKAE
PPVAKQEEESLRGQVKDLEEKLETLKMKRAEDKVKLKELEKYKIQLEQLQEWKTKMQEQQ
ADLQKQLKEAKKDAREALESKDRYMEEMSDTADAIEMATLDKEMAEERSESLQVEVESLK
EKVEELTMDLEIIKHEVEEKGSDGAASSYHVKQLEEQNSRLKEALVRMRDLSSSEKQEHV
KLQKQMEKKNGELETLRTQKEKLQEEMKQAEATIDELKEQVDAALGAEEMVETLTERNLD
LEEKVRELRETVTDLEAINEMNDELQENSRETEMELREQLDLNGARVREAQKRVEAAQET
VADYQQTINKYRELTTSLQDTNRELTIAQNANAEQVQQPPAELFDFKIKFAETKAYAKAI
EMELRKMEVGQANRQVSLLTSFMPDSFLRHGGDHDCILVLLLIPRLICKAELISKQAQEK
FDLNGNPVERTGMKMRGPPGEQLSFASGLVYSLTLLQATLHKYEQSLNCCSVEVYKRMGT
LYSEMSVHERSLDFFIDLLHKDQLDETVHVEPLTKAIKYYQQLYSIHLADQTEDCTVQLA
DHIKFIQSALDCMGAEVVRLRAFLQPGQEGADLNILLKDLDTSCSDIKQFCKKIRRRMPG
TDVPGVPAALAFGAPVSETLTDCRRQLTRVVAVLQEVAAAGAQMVAPLGEQEGLNTLKLE
DVAFKAVEQVYGSHGLNPHECLRQSCSSVISTMNKMATAMQEGEYDAERPQGKTPPVEAR
AVALRAEITDAEGLGVKLEDRDTVIKELKKSLKIKGEELSEAHVRLSLLEKKLDTSTKDA
DERVEKIQTKLDETLALLNKKEKEFEETMDALQADIDQLEAEKAELKQRLSNQSKVTIEG
LRAPPASGIASIVSGTAGAGVAPGAGGLSGPMQVVDSPLLRQQVETQRLGIKHLKNENNR
LKAEKMRAQLASLPPLHVPKLPLREASTSPPAEGPLHGALYRKTDQLLGTLLKMSAAVKV
VDITGKTPVSASAQLLDQTARLQSLSDALDKLKGEVSEHVVSQQPGAKVSSDFATFPISS
FVKAKEEKQGGTVFIGRVAIPCAKGQEQVHRLVLSQQHLQQVHRLLMT
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcagacgggggcggcaagcctgctaaggtgggctcggtggtggaggtgatcggt
aagggtcagcgtggtacggtggcttacgtgggcgccacgctcttcgccactggtaagtgg
gtgggcgtgatcctggacgagcccaagggcaagaacgacggcacggtccaggggaagaga
tactttcagtgtgatgagaactgtggtatcttcgtgcgccagtcccagatccagctagtg
gaagatggatccagtgccacctctccagacaccccagaggcggccactgccaagttcctg
cccaagcagaaagacattcctgagactccgaaatcagtcaaacagatgcccattcccaag
aagaccccccgagtcttagccaccccggcctctggtctgtccagctctctttccagggag
gatgtcagtgagggcagcctgtcttccaagggtgcactgggggctcccgttgtccccctg
cccagcggcacccccaccacgcccggtgctcctccccctgccacccctagcaaggctgag
cctcccgtagcgaagcaggaggaggagtctctgcgaggtcaggtgaaggatctagaggag
aagctggagaccctgaagatgaagcgggcagaggacaaggtcaagctgaaggagctggag
aagtacaagatccagctggagcagctgcaggaatggaagaccaagatgcaggagcagcag
gccgacctgcagaaacaactcaaggaggccaagaaggatgctcgggaggccctggagtct
aaggaccgctacatggaggagatgtcagacacggcggacgccatcgagatggccacactg
gacaaggagatggccgaggagcggtcggagagcttgcaggtggaggtggagtcactgaag
gagaaggtggaggagctcaccatggacctggagatcatcaaacacgaggtcgaggagaaa
ggttctgatggagctgcctccagttaccatgtcaagcagctggaggagcagaacagcaga
ctgaaagaggctctggtcaggatgcgtgacctgtcttcctctgagaagcaggagcatgtg
aagctccagaagcagatggagaagaagaatggagagctggagactctgaggacccagaag
gagaagctacaggaggagatgaagcaggctgaggccaccattgatgagctgaaggagcag
gttgatgctgctctcggggcagaggagatggtggagactctgactgagaggaatctggac
ctggaggagaaagtccgagagctcagagagactgtcacagacctggaagcgatcaacgag
atgaatgacgagctgcaggagaacagcagggagacggagatggagctgagggagcagctg
gacttgaacggggccagggtgagagaggcccagaagagggtggaggccgctcaggagacg
gtggctgactatcagcagacaatcaacaagtatcgcgagctcaccaccagcctacaggat
accaacagggagctgaccattgctcagaatgccaatgcagaacaggtccaacagcctcct
gctgagctgtttgacttcaagatcaagtttgctgagaccaaggcctacgccaaggccatc
gagatggagctgagaaagatggaggtgggccaggccaaccgacaggtgtctctcctcacc
tccttcatgcccgactccttcctgcgtcatggaggagaccacgactgtattctggtgctc
ttgctcataccaagactcatttgcaaggctgagttgatcagcaagcaggcccaagagaag
tttgatctgaatggtaacccagtggagaggactgggatgaagatgagaggaccacctgga
gaacaactcagctttgcctctggactggtgtattctctaaccctgctacaggccacgctg
cacaaatatgaacaatctctgaactgctgcagtgtggaggtgtataagcggatggggact
ctctactcagagatgagtgtccatgagcgttctctagacttctttatagacctgctgcac
aaagaccagctggatgagactgtacacgtggagcctctcaccaaggccatcaagtactac
cagcaactgtacagcatccacctggctgatcagactgaagattgcaccgtgcagctggct
gatcacatcaagttcatccagagtgcattggactgtatgggtgcagaggtggtgcgtctc
agggccttcctgcagccggggcaagagggggctgacctgaacatcctgctgaaggaccta
gacacatcctgcagcgacatcaaacagttctgcaagaagatcagacgcaggatgccaggg
accgacgtgccaggggtgcccgccgctctggcctttggcgcaccggtgtcagagactcta
acggactgcaggcgtcagctgactcgggtggttgccgtgctacaggaggtagctgcggcg
ggggcgcagatggtcgcccctctaggagaacaggaggggctcaacaccctcaaactggag
gacgtggccttcaaggctgttgaacaggtgtatgggtcccatggcctgaatccccatgag
tgtctgcgtcagtcctgcagctctgtcatctccaccatgaacaagatggctaccgccatg
caggagggagagtatgacgccgagcgaccacagggaaagactcccccggtagaggctcgt
gcagtggccctcagggcagagatcactgacgcagagggtctgggagtcaaactggaggac
agagacactgtcatcaaggagctcaagaagtccctgaagatcaaaggagaggagttgagt
gaggcccacgtccgtctcagcctgctagagaagaagctggatacgtccactaaagatgca
gacgaacgtgtggagaagatccagaccaaactggatgagaccctcgccctgctcaataag
aaagagaaggagtttgaggaaaccatggacgccctgcaggcagacatcgaccagctggag
gcagagaaagcagagctgaagcagcgtctctccaaccagtcaaaggtgaccattgagggc
ctcagggccccgcctgcctctggcatcgcatccatcgtctcaggaaccgccggagcgggt
gttgccccaggagcagggggcctgtctgggccgatgcaggtggtggactcccctctcctc
cgtcagcaggtggagacccagagactgggcatcaaacacctgaagaacgagaacaacaga
ctgaaggcagagaagatgagagcccagttagcctccctccctcccctccacgtccccaag
cttcctctgagagaggcctccacctctccccctgctgaggggcctctccacggggctctc
tacaggaagacagaccagctcctggggaccctactcaagatgagtgccgccgttaaggtg
gtcgacatcactgggaagactccagtgagtgcgagtgctcagctcctggaccagacagct
cgactgcagtctttgagtgacgctctggacaaactgaagggtgaagtgtcagagcatgtg
gtttctcagcagcctggggcgaaggtctcctctgactttgccaccttccccatttcctcc
ttcgtcaaggccaaggaggagaagcaggggggtacggtgttcatagggcgcgtggccatc
ccatgtgccaagggccaggagcaggtgcaccgtcttgtcctatcacagcagcacctgcag
caagtgcaccgcctcctcatgacctaa
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