Oncorhynchus nerka (sockeye salmon): 115133369
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Entry
115133369 CDS
T07952
Name
(RefSeq) integrin beta-6-like isoform X1
KO
K06589
integrin beta 6
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04510
Focal adhesion
one04512
ECM-receptor interaction
one04810
Regulation of actin cytoskeleton
one04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115133369
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115133369
09142 Cell motility
04820 Cytoskeleton in muscle cells
115133369
04810 Regulation of actin cytoskeleton
115133369
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
one04147
]
115133369
04515 Cell adhesion molecules [BR:
one04515
]
115133369
Exosome [BR:
one04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
115133369
Cell adhesion molecules [BR:
one04515
]
Integrins
Integrin beta subunits
115133369
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
I-EGF_1
PSI_integrin
EGF_integrin
EGF_2
EGF_Teneurin
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
115133369
NCBI-ProteinID:
XP_029522393
LinkDB
All DBs
Position
LG2:complement(6973264..6992279)
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AA seq
786 aa
AA seq
DB search
MGIAVLLLLILRHWINNAEGTCSVGSAVTCDECLQLGPHCAWCTQENFTDSFLISERCDT
PYVLLGRGCPQEQVEFPVTNSEVLRDQPLGKKTADTNSTQISPQKMALKLRTGSEVTFQI
SVQQTEDYPVDIYYLMDLSASMIDDLEMIKDLGSTLSKEMAKLTSKFRLGFGSFVEKPVL
PFIKITPGELENPCRSVDESCLPTFGYKHILPLTSSTEKFNNIITNQRVSANIDLPECGF
DAIMQAAVCGDKIGWRNDSMRLLVFVSDADSHFGMDSKMSGIVVPNDGECHLDSNNEYSM
AAHLEYPTLGQLMDKLVDNNILLIFAVTENQKHNYENYASFIPGATVGVLESDSRNILEL
IVTAYKELRSEIELEVLGDTEDLQISFTAICQDGTVLPGQKRCSNVKAGDTVSFNVTVEL
SECLDGPQRFLIKPVGFQDPLEIDLESLCSCACQQTPEPNSSHCSLGRGSLECGSCLCDP
GYMGSKCECTEESVQSSNCKASGAPESCSGQGECYCGQCVCHPSSFGLVYGAYCECDDFS
CVRFRGVLCGGHGDCDCGECVCHSGWTGEYCNCSSSRDTCVSEDGALCSGQGKCVCGKCV
CSMPGASGDTCEKCPTCGDSCSSARTCVECHLQAEDEATEECVQRCRVPHIFVNNSTEYD
ESRSTLCTLKSENNCFISFSVVAGDAGSTVHNLKMYDCPEPPNIAMIVLGVSLSILTIGL
ILLGVWKLLISVHDRNEVAKFEAERAKAKWQSGTNPLFRSSTSTFKNVTYKSAGGPKVDI
HSMDGC
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggggattgctgtacttctgctcctgattcttcggcattggatcaacaacgcggaggga
acatgctcggttggcagtgcagtgacttgtgacgagtgtctccagctgggtccccactgt
gcatggtgcacacaagagaatttcacagactcgtttttaattagtgagcgatgtgatacg
ccgtacgtcctcctagggagaggctgtccccaggaacaggtagaatttcctgtgaccaac
tccgaggtcctccgggaccagcctctcgggaagaagacggcggataccaacagcacccag
atttcaccacagaagatggccctcaaactcagaactggcagtgaggtgaccttccagatc
agtgtgcagcagacagaggactaccctgtagacatctactacctgatggacctctcagcc
tccatgattgacgacctggagatgattaaagacttgggctccaccctgtccaaagagatg
gcaaagctcaccagtaaattcagacttggattcgggtctttcgttgagaaaccagtcctc
ccgttcattaagatcactcctggagagctggagaacccttgtaggagtgtggatgagagc
tgtctgccaacgtttggatacaaacacatcctacctctcaccagcagcacagagaagttc
aacaatatcatcaccaaccagcgtgtgtctgccaacatcgacctgccggagtgtggcttc
gatgccattatgcaggctgctgtctgtggggacaagataggctggaggaacgactccatg
cgtctgctggtgtttgtgagcgacgccgactctcactttgggatggacagcaagatgtca
ggcatcgtcgtccctaacgacggggagtgccatctggacagcaacaatgaatactctatg
gctgcccatctggaatacccaactctgggacagctgatggataaactggtggacaataat
atcctgctcatattcgctgtgacggaaaatcagaaacacaactacgagaactatgcaagt
ttcatacctggtgccacggtgggggttctggaatcagattcaaggaacatcctggaactg
attgtgacggcgtataaagagctgcggtctgagatagagctggaggtactaggagacacg
gaggatctacagatctccttcacagcgatctgtcaggatgggacggtactacctggacag
aaacgatgctccaacgtcaaagctggagacacggtctccttcaacgtgactgtagaactc
tctgagtgtctcgacggtccccagcgtttcctcatcaaaccggtgggctttcaggacccc
ctggagatagacctggagtccctgtgctcctgtgcctgtcagcagacccccgagcccaac
agcagccactgcagtctgggccggggatctctggagtgtggctcctgtctgtgtgatccc
gggtacatgggttccaagtgtgagtgtacggaggagagcgtccagagcagtaactgcaag
gccagtggcgctccggagtcctgtagcgggcaaggggagtgttactgcggccagtgtgtg
tgtcacccgtctagtttcggacttgtctacggggcctactgcgagtgtgacgacttctcg
tgtgtgaggttccgaggggtcctctgtggaggtcacggggactgtgactgcggcgagtgt
gtgtgtcatagcggctggacaggggagtactgtaactgcagcagcagcagggacacgtgt
gtgtcggaggacggagcgctgtgcagtggacaggggaagtgtgtgtgcgggaagtgtgtg
tgttccatgcccggagcctctggagacacctgtgaaaagtgccctacctgtggagactcc
tgtagctctgctaggacctgtgtggagtgtcatctccaagcagaagacgaggccacagag
gagtgtgtccaaaggtgcagagtccctcacatcttcgtcaacaattccacagaatacgat
gagagccggtccacgctgtgtaccctaaagagtgagaacaactgcttcatctctttcagt
gtggtggctggagacgcagggagcactgtgcataatctaaagatgtacgactgtcctgag
ccccccaacatagctatgatagtactgggggtctctctgtccatcctcaccatcggcctc
atcctgctgggggtgtggaagctgttgatctcagtccacgaccgcaatgaggtcgccaag
tttgaggccgagagggcaaaggctaaatggcagtcgggtacaaaccctctgtttagaagc
tcgacatcaacgtttaaaaatgtaacttataaaagtgcagggggaccgaaagttgatatt
cattcaatggatggctgctga
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