KEGG   Oncorhynchus nerka (sockeye salmon): 115133374
Entry
115133374         CDS       T07952                                 
Name
(RefSeq) LOW QUALITY PROTEIN: splicing factor 3B subunit 2-like
  KO
K12829  splicing factor 3B subunit 2
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:one00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    115133374
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:one03041]
    115133374
Spliceosome [BR:one03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    115133374
 Complex B
    115133374
 Complex C
   U2 SnRNP specific factors
    115133374
SSDB
Motif
Pfam: DUF382 PSP SAP
Other DBs
NCBI-GeneID: 115133374
NCBI-ProteinID: XP_029522401
LinkDB
Position
LG8:20334705..20353158
AA seq 900 aa
MASDGPPGTEPMPSDLGSSVAALNTWSNPELQAKLGELGAPNMGPREEMLDRLKGYMMQT
GMMLSKPNQGGDDKPMTTQVSTNRPYKMPGIPPMPPMPMPPMPPGMGMLQAMSMMAGGPP
PPGMHMGMEPPGMPPGLSQEDQLKMVQQRAAMMMQHEERAKQQGDSRAMEEHMKEQELLE
QQKRAAVMMEHERQQELAKMQHGGPGPRMSDPGPRPPGMMPPMMRGMNPPPPGINTGGMN
PPPPGMSMMHTQRQRVPPPPGEDAREVWQGEEVGIGPKIPQALEKILQLKEIRQEQLSTA
PTEEEEEEEEESREMEMNNSAPVLSETEEDDSSLSKKDKNRKRRNRKKKNKKRRVQEKRV
QAVEKKEEDGGKEKEHEVEIEYVTEEPEIYDPNFIFFKRIFEAFKLTDDVKKEKEKEPEK
KEAPTMLKKKGFEEETKDSDDSDDEIRTDVPKLSKKKLRRMNRLTVAELKQLVARPDVVE
MHDVTAQEPKLLVHLKATRNTVPVPRHWCFKRKYLQGKRGIEKPPFELPEFIKRTGIQEM
REALQEKEDAKTMKTKMREKVRPKMGKIDIDYQKLHDAFFKWQMKPKLSIHGDLYYEGKE
FETRLKEKKPGDLSDELRIALGMPVGPNSHKVPPPWLIAMQRYGPPPSYPNLKIPGLNSP
IPESCSFGYHAGGWGKPPVDETGKPLYGDVFGTNAGDFQAKAEEEEVDRTPWGELEPSDE
ESSEEEEEDESDEEKPDETGFFTPADSGLITPGGFSSVPAGMETPELIELRKKKIEEAMD
GNETPQLFTVLPERRTGSGGAAMMASTHIYDVSGAMAGRKAGGGQESQGVEVALAPEELE
LDPMAMTQKYEEHVRNQEAGEKEDFSDMVAEHAAKQKQKKRKAQPQDTRSGAKKYKEFKF
NT seq 2703 nt   +upstreamnt  +downstreamnt
atggcttccgacggaccgccggggactgaacccatgccttctgacttggggagctctgta
gcggccctgaatacatggagcaatccggagcttcaagccaagctaggcgagctaggcgca
cctaacatgggccccagagaggagatgctggacaggctcaagggatacatgatgcagact
ggaatgatgctcagcaagcccaaccaagggggtgatgacaaacctatgaccacgcaggtc
agcaccaaccgaccctataagatgccaggcatcccccccatgcccccaatgcccatgccg
cccatgccacctggtatgggtatgctccaggcgatgagcatgatggcgggtggaccccct
ccaccagggatgcatatgggcatggagcctccaggcatgccccctggcctctcccaggag
gaccagctgaagatggtgcagcagagggctgccatgatgatgcagcatgaggagagggcc
aagcagcagggggattcccgtgctatggaagagcacatgaaggagcaggagcttctggag
cagcagaagagggcggcagtgatgatggagcatgagaggcagcaagagctcgctaagatg
caacatggaggaccagggcccaggatgtctgacccggggccacgaccccctggcatgatg
ccccccatgatgagaggtatgaacccacccccccctggtataaatactggtggaatgaac
ccaccccctcctggtatgtccatgatgcatacccagagacagagagttcccccaccgcca
ggagaggacgccagagaggtatggcagggagaggaggtgggcattggccctaagatccct
caggccctggagaagattctccaactaaaggagatcagacaggagcagctaagcaccgct
cccacagaagaagaagaagaagaggaggaggagagccgggagatggagatgaacaactcc
gctcccgtcttgtctgagacggaagaggatgacagttctctctccaagaaagataaaaac
cgcaagcgcaggaaccgcaagaagaagaacaagaaaaggcgtgtgcaggagaagagggtg
caggcggtggagaagaaggaggaggatggagggaaggagaaagagcatgaggtggagatc
gagtacgtcactgaggaaccggagatctacgatcctaacttcatcttcttcaagaggatc
tttgaggccttcaagctgactgacgatgtgaagaaagagaaagaaaaggagccggagaaa
aaggaggctcctaccatgttgaagaagaaggggttcgaggaggagacaaaagacagcgat
gacagtgatgacgagatcagaacagatgttcccaagctgtctaagaagaagctgagaagg
atgaacagactgactgtggctgaactcaaacagttggtggcacgtcccgacgtggtggag
atgcacgatgtgacggcccaggagcccaagctgctggtacacctgaaggcaaccaggaac
acggtccccgtcccccgacactggtgcttcaagaggaagtacctccagggcaagaggggt
atagagaagcccccgtttgagctgccagagttcatcaagaggacgggcatccaggagatg
agagaggctctgcaggagaaggaggatgccaagaccatgaagaccaagatgagggagaag
gttcgtcccaagatgggcaagatcgacattgactaccagaagctccacgacgccttcttc
aagtggcagatgaagcctaaactctccatccatggagacctatactacgagggtaaagag
tttgagacgaggctgaaggagaagaaaccaggcgatctgtcagatgaactgcgtatcgct
ctgggcatgccggttggaccgaactcccacaaggttccccctccctggctgatcgccatg
cagagatacggcccccccccctcctatcccaacctcaagatccctggactcaactcaccc
atcccagagagctgttcgtttggttaccacgctggtggttgggggaagcctcctgtagat
gagacaggcaagcctctgtacggtgatgtgttcgggactaacgcaggagacttccaggct
aaggctgaggaggaagaggtagatcgtacgccgtggggagagctggagccttcagatgag
gagtcttcagaggaagaggaggaagatgagagcgacgaggagaaaccagacgaaaccggc
ttcttcacaccggcagacagtggtctgatcaccccaggaggcttctcgtcagtgcctgct
ggtatggagactccagagctcatcgagctgaggaagaagaagattgaggaggccatggat
gggaatgagactcctcagctgttcacggtgctcccagagaggagaacgggctctggaggg
gcagccatgatggcatccacacacatctacgacgtatcgggggcgatggctggtcgtaag
gcgggtggaggccaggagtcccagggggtggaggtagccctggccccagaagagttggag
ctggacccaatggccatgacccagaagtacgaagagcatgtcaggaaccaggaggccggt
gagaaggaggacttcagcgacatggtggccgagcacgccgccaaacagaagcaaaagaag
aggaaggcccagccccaagacacacgaagtggtgccaagaaatacaaagagttcaagttt
tag

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