Oncorhynchus nerka (sockeye salmon): 115133414
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Entry
115133414 CDS
T07952
Name
(RefSeq) trichohyalin-like
Organism
one
Oncorhynchus nerka (sockeye salmon)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AIG1
LbR_Ice_bind
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
115133414
NCBI-ProteinID:
XP_029522482
EnsemblRapid:
ENSONEG00000021857
LinkDB
All DBs
Position
LG8:21221761..21237420
Genome browser
AA seq
2305 aa
AA seq
DB search
MESQGEGYPPFSVSTGGDESMQGVMQREVNPSTSAPPLPELRLVLLGRKGTGKSSAANTI
LGGIGGFESGRPTEECSKKRADLTRRRVTVVDTPGWEWYYPLNSTPDWVRRETLRSMSLC
SPGPHVILLVIRSCASVTESYRKQIEEHLESLGEGVLDHTMLLFTRGDELGVVPMEQRIL
TGGAAFQQLLRRCGNRYHVLDNRSRGDGTQVRELLRKMVEMVENKGGHFGADPALLRLEA
DGRRRARERRKRQRQMEAQTQRGTIRAVLMTDAGSQGSDWDGKQPFSKGTRRLPELRLVL
LGERETGKSSAGNTILGGGGEGAGFFQTGRVTEECARCQAEVAMRLVTVVDTPGWEGGVA
GPTPERVKREMVWGSVSLCPPGPHAVLLTLRVDTLVSSTPVREHLELLGEEVWRHAVLLF
THGDQLREGVGIEQHIQSGGRDLKWLVEKCGSRYHVISNVNGRGDAAQVSGLLEKVEKMV
AGNRCEAFSSLVQEVSDLTRQRNEKFNQRLKEVGDKMQRQEMELKRMREREVKSIRWFFD
RKKKVKSPGKSGVEKEEDGGEEEEEKRSDGRKNEMGELEERIRWLTEDKEREIQDLGAEN
YRFIAALNQRSREREEIVIKLEEREREIDELKERVDEQQVKLLDLERVIGEKERDKKERE
EEFRGKHQEWRREAEDLKDRIALEEKEKEEWIGRGKTSQNEMYESKQLYEERLLQYEEEM
QRKLHEKEEEMERKLHEKEEEMERKLNEKAEEMEGERLLSETRETERRDEQRKIDEREKK
EMSKLKEIIEKKNKEITDAQQLVTEKEKEIVEVRARSVDNVKQIERLKENNEQKESEVVA
MQRQHTEDKSRRDAEAMDKLRGKEVELNNLIQKDGENKRELVRLRQTIKQTKTELENLTA
AIEKERMNMIQEYEKEIKTKEEEMRLMLEDHESAVSQLQKKEAESRRNISGVTECLRDSQ
GKVEVLQELNVKLRKEMDNLRKKCQEYEEDQGVQRTERESREADIRELLCGYEEQLKHKD
GEIHHVMEERNLEVAALKQTNDQRQKELENMKEGEEVREKQVEEIRGCYEKNLRERQNEL
KQMAEEKEQELEKRGRVYDEKEREQARSKDVLDNRGRELETKDAELVKREEVLVKGEEGL
VKRGKELVKGKEELVKGEEALVKGEEKLVKGEEELVKREEVLVKREEVLVKREEVLMKRE
EVLVKGEEELVKREEVLLKREEVLVKGEEGLVKREEVQVKREEVLVKREEVLMKREEVLV
KGEEELVKREEVLMKREEVLVKGEEELVKREEVLLKREEVLVKREEVLVKREEVLVKGEE
NLAQGEEELFKREEELVKGEEELMKGEEELLKRQEGLVKGEEERVKREEELVKREEVLVK
GEEKLVKREENLAKGEEELFKREEELVKGEEELMKREEVLVKGKDELFEREELVKGEEEL
VKREEELFKREEELVKGEEELVKRQEDLVKREENLVKGEEELLKREEELFKREEELVKGE
EKLVKRKEELVKGKEELEKGEEGLVKRQEEQVKGEEKLVKREEELFKREEVQVKEEEKLV
KRQEQLVKGEENLVNREKMLVKGEEELEKREGELVKGEEELVKKEEELEKREGELVKREE
ELVKGEEELVKRKEELVKRDEELEGRRREVKNWEEDLETRQKGQEKQKQELWSREKCLKR
KEEESESQEQNICSKEQDVEKIEKELQNRKNQLDSREYDLKTSEENIKKIELDLENLQRQ
QDNRQLELDERENEQGSGKIEHQNQREDLEKRERELRAREHDLRCGEQVLENQEEDMNNR
QHDMDKRQEELENIQQDLEKRELHLKNREEETKKHRQALEKREKEIKDSKQGLENREHHL
KNGEQELLNWRTELEIQGKHMSNRSQDMEKLEGEVENHQQELRNREEGFEDKMQELRNWE
QRLERLETELERREHEQRNTNNGSKEKEQEVNHFEKDPDGRDYDVEIREPNGLILSHDAH
GGDVCDMTTRCDNVTLEGIEDSHMMYQEVGVVEKEGRELQGKEPERSESITDREDQTMME
CASSTILNNNSQFERMAAPEEKEGAEECTKRGRMGEEEDEEDNYKEIEDVNVISDLKLTP
SPGPSVENTKHIQRSELRLVLLGETWSSRHPAGYTILGREASHPGESISMPWRGQIAGRQ
VSVVEPLGLKWRNGPDGNTSVTTDPTQLRNIFHSVSLSHPGPHAILLVLPAYLSFTQKYR
RAVEHHMSVLGEDIWRRTMVLFTWGEALGESAEQHILRNGDLQWLVGQCGGRYHILASRK
NNSQTAELMEKIEEMVAGNYQCNGD
NT seq
6918 nt
NT seq
+upstream
nt +downstream
nt
atggagtcacagggcgaagggtaccctcccttttcggtctcaactggtggtgatgagagt
atgcaaggtgttatgcagagagaggtgaacccctcaactagtgctccccctcttccagaa
cttaggctagtcctgctgggaaggaaaggaacagggaagagctctgcagccaataccatc
ctgggaggaataggggggtttgagagcggcagaccaaccgaggagtgctcgaaaaagcga
gccgatctaaccaggagacgagtcaccgtggtagacacccctggctgggaatggtactac
ccgctcaacagcacccccgactgggtccggagagagacgttgcgtagcatgtccctgtgc
tcccccggacctcacgttatcctgctagtgatacgttcctgcgcctcggtaaccgagtcc
tacaggaagcaaatagaggagcacctggagtctctgggggaaggggtgttggaccatacc
atgttgctgttcaccaggggggacgagctgggtgtggtgcccatggagcagaggatcctg
acgggtggggctgccttccagcagctgctacggaggtgtgggaacaggtaccatgtcctg
gacaataggagccggggagatggaactcaggtaagggagctactgaggaagatggtggag
atggtggagaacaagggaggacattttggggcagatcctgccctcctgaggttggaggca
gacgggaggaggagagcgagggaaaggaggaagaggcagagacagatggaggcccagact
cagaggggtaccatccgagctgtgcttatgactgacgctggatcccagggctctgattgg
gatgggaaacaaccattctccaagggtactcgtcgtctcccagagctgagactggtcctc
ctgggagagagagagacggggaagagctcggctgggaacaccatactgggtggaggtgga
gaaggagcagggttcttccagacagggagagtgacggaggagtgcgcccggtgccaggca
gaggtagccatgaggctggtcaccgtagtggacacccccggttgggaaggtggagtagca
ggccccaccccagagagggtaaagcgggagatggtgtggggtagcgtgtccctgtgtccc
ccgggaccccacgctgtgctcctcaccctgagagtggacaccctggtcagttccacacct
gtaagagaacacctggagctcctgggggaagaggtctggaggcatgctgtcctcctgttc
acccatggggaccagctgagggagggggtgggcattgagcaacacatccaaagtggaggg
agggaccttaagtggctggtggagaagtgtgggagcaggtaccacgtcatcagtaatgtg
aatgggcgtggggacgccgctcaggtgtctggcctgctggagaaggtagagaagatggtg
gccgggaacaggtgcgaggccttctcgtcgctagtgcaggaggtcagcgacctcaccaga
cagaggaacgagaaattcaaccagcgtctcaaagaggttggtgacaagatgcagcgtcag
gagatggagctcaagaggatgagggagagggaggtcaaaagcatccgctggtttttcgat
cggaagaagaaagttaaatctccggggaagtcaggcgtggagaaagaggaggatggaggg
gaggaggaggaggagaaaaggagtgatgggaggaagaacgaaatgggcgaactagaggag
aggattcggtggctgacggaggataaggagagagagattcaggatctgggcgccgaaaac
tacagattcatcgctgcgctcaatcagagaagcagggagcgagaggagatagtcatcaag
ctagaggagagagagagagagattgacgagctgaaagagcgagttgacgagcagcaagtg
aaactgctcgaccttgagcgtgtcatcggggagaaagaacgagataaaaaagagagggag
gaagagtttagagggaagcatcaggaatggaggagggaagcagaggatttgaaagacagg
atagccctggaagaaaaagaaaaagaggaatggataggaagaggaaaaacgtcacagaac
gagatgtatgagtcaaaacagttgtatgaggagaggcttttacagtatgaggaagagatg
cagagaaaactgcatgaaaaagaggaagagatggagagaaaactgcatgaaaaagaggaa
gagatggagagaaaactgaatgaaaaagcggaagagatggaaggagagagactgctatct
gagacaagggaaacagaaaggagggatgagcaaagaaagatagatgaaagggaaaagaaa
gagatgagcaagctgaaagaaatcattgaaaagaaaaataaagaaataactgatgcacag
caattggttacagagaaagaaaaagagattgtggaagtgagggcgagatccgttgacaac
gtaaaacaaattgagcggctgaaagaaaacaatgaacagaaggagtctgaggtggtggca
atgcaacggcaacacacagaggacaaaagtaggagagatgccgaggcaatggacaagtta
cgagggaaagaagtggagctcaacaacttaatacaaaaggacggggaaaataagagagaa
ctcgtccgtttaaggcaaaccattaaacaaacaaaaacagaactggaaaacttaactgcc
gcgattgagaaggaaaggatgaacatgatacaggaatatgaaaaggaaatcaagacgaag
gaagaggagatgaggttgatgttagaagaccacgaaagtgctgtcagccaactgcagaaa
aaggaggcagaaagtagaaggaacatttcaggcgtgacagaatgcttaagggacagccag
gggaaggttgaggtactgcaggagctgaacgtgaaattgaggaaagagatggacaacctc
aggaagaagtgtcaggagtatgaggaggaccagggggttcagaggaccgagagggagagc
agggaggctgacatcagagagctgctctgtggatatgaagagcagttaaaacacaaagac
ggggaaatccaccatgttatggaagagcggaacctggaggttgctgcgttgaaacagaca
aacgatcagagacagaaggagctggagaatatgaaagaaggggaggaggtgagagagaaa
caggtggaggagataagagggtgctatgagaagaatctgagagaaaggcagaatgagctg
aaacagatggctgaggaaaaggagcaagagcttgagaaaagggggagagtgtatgatgag
aaggagcgagaacaagcgagaagtaaagacgtgctggataacagaggacgtgaacttgag
acaaaagatgcagagctagtgaaaagagaagaagtgctagtgaaaggagaggaagggcta
gtgaaaagagggaaagagctagtgaaaggaaaggaagagctagtaaaaggagaagaagca
ctagtgaaaggagaggaaaagctagtgaaaggagaggaagagctagtgaaaagagaggaa
gtgctagtgaaaagagaggaagtgctagtgaaaagagaggaagtgttaatgaaaagagag
gaagtgctagtaaaaggagaggaagagctagtgaaaagagaggaagtgctactgaaaaga
gaggaagtgctagtaaaaggagaggaagggctagtgaaaagagaggaagtgcaagtgaaa
agagaggaagtgctagtgaaaagagaggaagtgttaatgaaaagagaggaagtgctagta
aaaggagaggaagagctagtgaaaagagaggaagtgttaatgaaaagagaggaagtgcta
gtaaaaggagaggaagagctagtgaaaagagaggaagtgctactgaaaagagaggaagtg
ctagttaaaagagaggaagtgctagtgaaaagagaggaagtgctagtgaaaggagaggaa
aatctagcacaaggagaggaagagctattcaaaagagaagaagaattagtgaaaggagag
gaagagctaatgaaaggagaggaagagctactgaaaagacaggaagggctagtgaaagga
gaggaagaacgagtgaaaagagaggaagagctagtcaaacgagaggaagtgctagtaaaa
ggagaggaaaagctagtgaagagagaggaaaatctagcgaaaggagaggaagagctcttc
aaaagagaagaagaattagtgaaaggtgaggaagagctaatgaaaagagaggaagtgcta
gtgaaaggaaaggatgagctattcgaaagagaagaattagtgaaaggagaggaagagcta
gtgaaaagagaggaagaactattcaaaagagaagaagaattagtgaaaggagaggaagag
ctagtgaaaagacaggaagatctagtgaaaagagaggaaaatctagtgaaaggagaagaa
gagctattgaaaagagaggaagagctattcaaaagagaagaagaattagtgaaaggagag
gaaaagctagtgaaaagaaaggaagagctagtgaaaggaaaggaagagctagaaaaagga
gaagaagggctagtgaaaagacaggaagagcaagtgaaaggagaggaaaagcttgtgaaa
agagaggaagagctattcaaaagagaggaagtgcaagttaaagaagaggaaaagctagtg
aaaagacaagaacagctagtgaaaggagaggaaaatctagtgaatagagagaaaatgcta
gtgaaaggagaagaagaacttgagaaaagagagggagagctagtgaaaggagaggaagag
ctagtgaaaaaagaggaagaacttgagaaaagagagggagagctagtgaaaagagaggaa
gagcttgtgaaaggagaggaagagcttgtgaaaagaaaggaagagctagtgaaaagagac
gaagagttggaaggtagaagacgagaagtaaagaactgggaggaagatcttgaaacaaga
cagaaaggacaagaaaaacagaaacaggagttgtggagccgagaaaaatgcttgaaaaga
aaggaagaagagtctgaaagtcaagaacaaaacatctgcagcaaggagcaagacgtggag
aaaatagaaaaagagctgcaaaacagaaagaaccaacttgatagtagggaatatgattta
aagacttcggaagaaaatattaagaaaatagagctggatctagaaaacctgcagcgacaa
caggacaaccgtcaactagagctggatgaaagggaaaatgaacaagggagtgggaagata
gaacatcagaaccagagagaggatctggaaaaaagagagagagaactgagggccagagaa
catgatttgagatgtggagaacaagtgttggaaaaccaggaagaggatatgaacaaccga
cagcacgacatggacaaaagacaagaagaattggaaaatatacaacaagaccttgagaaa
agggagcttcacctgaagaatagagaggaagaaacaaagaagcacagacaagctctggaa
aaaagagagaaagagatcaaagacagcaaacaaggacttgaaaacagagaacaccatttg
aagaatggagagcaagagttactgaactggagaacagagttagaaattcaagggaaacat
atgagcaacaggagccaagacatggaaaagctggagggggaggtggaaaaccatcaacaa
gagctaaggaacagagaggaaggttttgaagacaaaatgcaagagttgaggaattgggag
cagcgtctagaaagacttgaaacagaactagagaggagagagcatgaacagaggaatacg
aataatggatccaaggaaaaggagcaagaagtgaaccattttgaaaaagatccggatggc
agagattatgacgtggagatcagagagcccaacggattgatactaagccatgatgcacat
ggaggagatgtctgtgacatgacaacaagatgtgataatgtgacactagagggtatagag
gattcccatatgatgtaccaggaagtaggagtggtggagaaagaaggacgggaactgcag
ggaaaagaaccagagaggagtgaaagcatcacagaccgggaagatcagacgatgatggaa
tgtgcctcgtctacaatcttaaacaataacagtcagtttgaaagaatggcagcgccggaa
gagaaagagggggcggaagaatgtacaaagagggggagaatgggtgaagaggaggatgag
gaggataattataaggaaattgaagatgtaaacgttatctcagacttaaagttaactcca
agtccaggccccagtgtagaaaacactaaacacatccaaaggtctgagctgaggctggta
ctgttaggggagacttggtcctcccgtcacccagcagggtacacaatcctgggcagagag
gcctcacacccaggtgagtccatctcgatgccatggcggggacaaatcgctggaagacag
gtcagtgtggtagaaccacttgggctaaagtggcgtaacggaccagacggcaacacctcc
gtcaccacagacccaacacagctcaggaacatcttccatagtgtttccctgtcccaccca
ggtccccacgcgatcctcctggtcctaccagcctacctgtcattcacacagaagtatcgg
agagcggtggaacaccatatgagtgtgctcggggaagatatttggcgtcgcactatggtg
ctgttcacgtggggggaagctttaggggagagtgcggagcagcacatattgaggaatggg
gacctccagtggctggtgggacaatgtggcggtagataccatattctggccagcaggaag
aacaactctcaaacagcagagctaatggagaagatagaggagatggtggcaggaaactat
caatgtaatggagactga
DBGET
integrated database retrieval system