Oncorhynchus nerka (sockeye salmon): 115133441
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Entry
115133441 CDS
T07952
Name
(RefSeq) LIM domain-containing protein ajuba-like isoform X1
KO
K16682
LIM domain-containing protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115133441
03036 Chromosome and associated proteins [BR:
one03036
]
115133441
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
115133441
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
115133441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Motif
Other DBs
NCBI-GeneID:
115133441
NCBI-ProteinID:
XP_029522525
LinkDB
All DBs
Position
LG8:complement(22050808..22062017)
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AA seq
723 aa
AA seq
DB search
MDRLGSKLLEKLKLTDSGSVKFASSKKKNELVNNTNNNSNGNTSSGLPPTLSTETSSPST
PGQFSLTSPTSTEACRPASGRGGNGLGERVSATQHLSPSTSSIAPQTADCEHQPYSLSTL
APLRRRSPQQRASCYLGEGVDIQMRRESGLGDCDPAGSKASLNQRRYSLELQQLVRRQQL
LSHPPLSHSSGPPPAYPTSSGYGSAPRGGAMAELHYLPEPERHKRLSLQEALFYKRLSAG
GELWESTRPASLSHPPHRPSEMGGGGGVGGGFFFPPGPTLSPCSSFSLQESVLVSPRSSF
ASSTASGGSPMGSRCSSNRTSGISLGYDTRYSAAPQLQFSSLHAGGSTSGQGYTVSGRAG
AHSGSGGWQDYLDGVSSPGGTGVQDSRHSYPPAVGSPAAACYRAGPEWWDERGAGTARGE
ETGVGAGRERARYSDLPGTRYQEELTRLLLRDAALEGEGLHLGGLMLKEHAKALSKPVTL
VNTATAAGPIKAQEEPGTGREALSENRQEFFGTCVKCGKGVYGADNACQALDSLYHTRCF
TCVSCGRTLRNKDFYNVNGSVYCKEDYMFSGFQAAAEKCSVCGHLILEQILQAMGNSYHP
GCFRCVVCSKALDGVPFTVDHLSNIYCVSDYNRSTCRSILPLELLLPRRTFAPKCAACLQ
PILPAEGSEEILRVMSMNNDYHFECYHCEECGKQLSDQQGSQCFPLDSHLLCHSCHMTRV
CAS
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggaccgacttggaagtaagttattggagaagttgaaactgactgactcagggagtgtg
aaattcgccagttctaaaaagaaaaacgagttggtcaacaacaccaacaataacagcaat
gggaacaccagtagtggactaccaccaaccctgagcactgaaacctcctcaccatcaaca
cccggccagttctctctcacctctccaacctcaacggaggcatgcagaccggccagtggc
agaggtgggaatggactgggagagagagtctccgctacccagcacctctccccctctaca
agctccatcgccccccaaactgctgactgcgaacatcaaccctactccctctcgactctc
gccccccttcggcggcgttcgccccagcagcgtgcctcctgctacctgggggagggcgtt
gacatccagatgaggcgtgagtcaggcctgggggactgtgacccggctgggtccaaggcc
tctctgaaccagcgccgctactctctggagctccagcagctggtccgacgccagcagctc
ctctcccaccctcctctgtcccactcctctggcccccctccggcataccccacctcctcg
ggttacggctccgctccccgtggtggcgcaatggccgagctgcactacctccccgagccg
gagcgccacaaacgcctctccctccaggaggcgctgttctacaagcggctgagcgccgga
ggggaactctgggagagcaccaggccagcctcgctctctcaccccccacaccggccctct
gagatgggtggaggaggaggggtgggtggaggtttcttcttccccccaggcccgacactg
agcccctgctcgtccttcagtctccaagagtcggtgctggtcagtcccaggtccagcttt
gcctccagtactgccagcggtggaagccccatgggcagccgctgtagcagcaaccgcacc
agcggaatcagcctgggctatgacacccgctactccgcggcaccgcagctgcagttctcc
tctctgcatgcagggggctccaccagtggacagggatacacagtctctggcagggccggg
gcacactctgggtcaggaggctggcaggactacctggacggggtctcctcacctggagga
acaggggttcaggacagccggcattcatacccgcctgcggtgggtagcccggcagcggcc
tgttaccgggctgggcccgagtggtgggatgagaggggagcaggaacagcacgaggggag
gagactggcgtgggcgctggcagggaacgggcgcgctactcggacctcccggggacccgc
taccaagaggaactgacgcgcctgttgctaagagatgcagcactggagggggaggggcta
cacctgggtggtctgatgctcaaagaacatgccaaggccctcagcaagccggtgacgctc
gtcaacacagctacggctgccggaccaatcaaagcccaggaggagccaggaacggggagg
gaggcgttgtctgagaatcgccaggagttctttggtacatgtgtgaagtgtgggaaaggt
gtgtatggagcggataatgcttgccaggctctggacagcctctatcacacacgctgcttc
acctgtgtgtcctgtggtcgcaccctgagaaacaaggacttttacaacgtcaatggctct
gtgtactgtaaagaggattacatgttctcagggttccaggctgcagcagagaaatgcagt
gtgtgtggccaccttatcctggaacagatcctccaggcaatggggaactcttaccacccc
ggttgtttccgctgtgtggtgtgttccaaagccctggacggagttcccttcaccgtcgac
cacctcagcaacatctactgtgtctcggactacaacaggtctacatgtcgttctattctg
ccattggaactcttgttgccccgcagaacgtttgctcctaaatgtgctgcctgcttacaa
cccatcttacctgctgagggcagcgaggagatactccgggtgatgtctatgaacaatgat
tatcactttgagtgctaccactgtgaggaatgtgggaagcagctctcggatcagcagggc
tcccagtgcttccctctggactctcatctcctctgccattcatgtcacatgacccgggtg
tgcgcctcataa
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