Oncorhynchus nerka (sockeye salmon): 115133462
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Entry
115133462 CDS
T07952
Name
(RefSeq) GRB10-interacting GYF protein 1-like isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115133462
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
115133462
Surveillance factors
Other surveillance factors
115133462
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
DUF6033
Motif
Other DBs
NCBI-GeneID:
115133462
NCBI-ProteinID:
XP_029522569
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All DBs
Position
LG8:complement(22838910..22872335)
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AA seq
1095 aa
AA seq
DB search
MTAETLNFGPEWLRALSSGGSVTSPPPSPAMPKYKLAEYRYGREEMLALYIKENKAPEDM
QDKEFAAILQDEPMQPLALEPLTEEEQRNFSMSVNSVAVMRLMGKGGGVAPAGMARGRGT
TRGGGRGRGRGESGGFYQRSIEEGEVGFGRGAREIYRSQSWDDRGERRFEKPARAREGVR
VGLEEVTGVPVPGVPRKDYTRSDSENWRTLREEQEEEEGADPGGSWRLAAARRLDGSAHP
HYSGDVHTAQQSDVTLSFPSSLTLSDGGPRSAGWREHDGPVEGRRRKFEFDFGGGRRRAG
SEGLDDDRDGLPEWCTDEEDGEMGTFDASGAFLPLSKDEEFDFQGIEEEEESLSGMERIM
NGGQRVDVKESASDGEVKNRTSSPSSSAPPALGLNPPMPQLSLTVAELEASQMADSHPLP
ALLPAPAPLAVPVPAKASKMPSEVVPEGSPAEDSTTQQSPSTSSSLHSPPPSASSSSAAT
HLPLPPGGDTEDDEGMKHLQQEAEKMVASLQDTSLEEECFTQTLQESRNTASALPLSHDA
AMKWFYKDPQAEIQGPFTTLEMYEWFQAGYFSMSLLVKRGCDEGFQPLGDVIKMWGRVPF
APGPSPPPLLVRPPPPRPQPLPPRGPAGNMDQDRLKKQQQQDLAAAALYQQLQQQQQLFQ
LINRCGEQGMMPSVNRSMSVPDTGSMWDMHTSASQQSGGEASLWDLTMNSSTQGPTLEQL
QKLQQERREAELRTKREEEEQRKRREEKRRQQEEQKRREEEEIFRRKQCRQQQELIMKLL
QQAPQQGSASGVGSGWGTGGLNKPGAKGLSLLDMQEAERLLKQQQRAQQQQRERHQGMSM
GQWGDGGAVPGGLWGGGGGMEGKAGGGGAMGLWEEAVKNQSRGGSMQGLKNSRSSPSLSE
QYMLSRRKQRTDEEDKLLKLLQGIKTPQDGFTTWCEQMLHALNTQANNTSSPLDVSTIVA
YLKEVESPYEVLDFICSYLGDTMEAKEFAKQFLERRAKQKQNQKRQQEQLSKEVAGLTMN
NFPLQDSMRGVNPSALQSMFQAAHMAKGGMYDAQGGMKKKKQPVMLQSDPSILGYSFHNA
GERLSLNEMEMVEDY
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgagacacttaacttcggcccagaatggctccgtgcactatccagtgggggg
agtgtgacgtccccccctccttcccccgccatgccaaagtacaagctggccgagtatcgc
tacggccgagaggagatgttagcactttatatcaaagagaacaaggccccagaggacatg
caggataaggagtttgctgctattctgcaagatgagcccatgcagccgctggcactggag
cctctcactgaggaggagcagaggaacttctccatgtctgtgaacagcgtggctgtgatg
aggctcatgggtaaaggaggtggagtcgcccctgcgggcatggcccgaggcagaggcacc
acacgtggaggaggccgagggcgaggccgaggagagagtggaggattctaccaaagaagt
attgaggagggagaggtgggcttcggccgcggagccagagagatctatcgcagccagagc
tgggatgacaggggcgagaggcgttttgagaagcctgcgcgtgccagggagggggtacgt
gttggattagaggaggtgacgggtgtacctgtgccgggggtgccgaggaaggactacaca
cggtctgacagtgagaactggcgtaccctcagagaggagcaggaggaagaggaaggggcc
gacccaggaggcagctggagactggccgcagcacgtagattagatggtagcgcacaccca
cactattctggagacgtacacacagcacagcagagtgatgtcaccttatctttcccttca
tctctaactctttcagacggaggcccaaggtctgcaggctggcgggagcacgacggtccg
gttgaggggcgtcgcaggaagtttgagtttgacttcggcggaggtcgcaggcgggccggg
agcgaagggttagatgacgacagagacggactgcctgagtggtgcactgatgaagaggac
ggagaaatgggcaccttcgacgcatccggcgctttccttcccctatccaaggatgaggag
tttgacttccaggggatagaggaggaggaagagagcctgtctggcatggagaggatcatg
aatggaggacagagagttgacgtcaaggaatcagccagtgacggggaggtgaagaacaga
accagttccccctcctcctctgcccctccagccctgggcctcaacccccccatgccccag
ctctccctcacagtggctgagctggaggcctctcagatggccgacagccaccctcttcct
gctctgctccctgctcctgctcctctcgctgttcctgtccctgccaaggccagcaagatg
ccaagtgaagtagttcctgaaggatcaccagcagaggactccaccacccagcagagcccc
agcacctcctccagtctccattccccccctccctccgcctcctcctcctctgctgctacc
cacctccccctgccaccagggggtgacaccgaggatgacgagggcatgaagcacctgcaa
caggaggcagagaagatggtggcgtccctgcaggacacatctctagaggaggagtgtttt
acccagacgctgcaggagagcagaaacacagcctctgcactgcccctctcccacgacgct
gccatgaagtggttctacaaggacccccaggcagagatccagggtccgttcaccaccctg
gagatgtacgagtggttccaggcgggctacttctccatgtctctgctggtgaagaggggc
tgcgacgagggcttccagccgctgggcgacgtcatcaagatgtgggggcgtgtgcctttc
gcccccgggccctccccaccgcccctgctggtgagacctccaccaccgcgcccgcagccg
ctgccaccccgtggtcctgctggtaacatggatcaggaccgtctgaagaagcagcagcaa
caggacttggcagcagctgctctctatcagcagctccagcagcagcagcagctattccag
ctcatcaacaggtgtggagaacagggtatgatgccttcagtgaacaggtcgatgtcagtg
ccagatacagggtccatgtgggacatgcatacctcagcttcacagcaatcaggcggtgaa
gccagtttatgggacttaacaatgaattcttcaactcagggtccaacactcgaacagctt
cagaagctccagcaggagaggagggaggctgaactcaggacgaagcgcgaagaggaggag
cagcgcaagaggagagaggagaaaaggaggcagcaggaggagcagaagaggagggaggag
gaggagattttcagacgcaaacagtgtcgccagcaacaggagctgatcatgaagctgctc
cagcaggcccctcagcagggctcagcctccggggtggggtctggctggggcactgggggc
ctcaacaagccaggggccaagggcctcagtctgctggacatgcaggaagccgagaggctt
ctcaaacagcagcagagagcccagcagcaacagagggaacgccatcaaggcatgtccatg
ggtcagtggggggacggaggtgctgtcccaggaggcctgtggggaggcggaggggggatg
gagggtaaggctggaggcggaggggccatgggtctgtgggaggaggcggtgaagaaccag
tccagaggtggcagcatgcagggtctgaagaacagccgcagcagcccctcactcagtgag
cagtatatgttaagtcgtaggaagcagcgtacggatgaggaggacaagctgctgaagctg
ctgcagggcatcaagacgcctcaggacgggttcaccacctggtgtgaacagatgctgcat
gccctcaacacccaagccaacaacacctcctccccactggacgtgtccaccatcgtggca
tacctgaaggaggtagaatctccctacgaggtgttagactttatctgctcctacctggga
gacaccatggaagccaaagagttcgccaagcagttcctggagcgccgtgccaaacagaaa
cagaaccagaagaggcagcaggagcagctatcaaaggaagtagcagggctgaccatgaac
aacttccctctgcaggactccatgcggggcgtgaaccccagcgcactgcagtctatgttc
caggcggcccacatggctaagggagggatgtacgatgcccaggggggcatgaagaagaag
aaacagcccgtgatgctgcagtctgaccccagcatcctaggctactcgttccacaacgcg
ggtgagcgtctgagcctaaatgagatggagatggtggaggattactga
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integrated database retrieval system
