Oncorhynchus nerka (sockeye salmon): 115133519
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Entry
115133519 CDS
T07952
Name
(RefSeq) LOW QUALITY PROTEIN: alsin-like
KO
K04575
amyotrophic lateral sclerosis 2 protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
one03036
]
115133519
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
115133519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
RCC1_2
MORN
VPS9
RhoGEF
PH
Motif
Other DBs
NCBI-GeneID:
115133519
NCBI-ProteinID:
XP_029522657
LinkDB
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Position
LG2:7174709..7196256
Genome browser
AA seq
1693 aa
AA seq
DB search
MHQHCHGQISVMESQRKWYAAPSSGEDSSGERGSLHTWKGYSCSVTPERVLLSRPVLQAA
LGTRHGVLLVEGGQVYSFGEFRWKQSQVSEVGPLKPVLESALSGQCVVAVAAGSFHSGAV
TEDGGVHMWGENSFGQCGLSSLTVVPNPTPVAVLDPDTSPPHTIRVLELACGEQHSLALS
AQHEVWAWGSGCQLGLVTTIFPVWKPQKVEHLAGRHVLQVACGAFHSLALVRCLPPQEAR
RPLPDKCGQCNQLLYTMTDKEDHVIISDSHYCPLGVELLADGEARLEPGRSPPLRLWGSP
SEPLSSHTSASAPGLHPSITDHTDYERRTVAQNGEILTTTDSDISAAGTDSDRTVGGVGG
AGSQNSPYPDDQAVKEYLKKLSDTSLAEETAKMTIAGASFQPPADSLDLLTSDLLPGVMP
VTTSSALNSLVSSCASAVAERVVSTCEALSLKKRINCYYPGVGGVAGAPGGVPGGFPGGP
AEERVRLEESMQGKKSCSTGDIREEEAEGLSRRLSLPGLLSQVSPRLLRRASRPRVRAVP
LTPVGGLPEAGELLPSLQTEVWSWGRGEEGQLGHGDNLPRLQPLCIKCLSSKEVVLVAAG
AHHSLALTAQSQVFSWGSNSSGQLGHMACPTTIPRLAKLSEGIRVWDVGAGAQHTLLLAD
GDCYQPILYYSGQQVREAAQDAPQDQTEGYSYTQQPVLLPFCMNLGYVSGVFAGGQSCVA
LADRNVTGFIASLHELAAAERKFYCKLSSVKNQILRPLLDLESLGTALGPASTVLLQSLA
RCYCRLCHLTGQHSALLTANLRRRREVKSLVMLEHASIFLDTYNEYCCSVGNFLVMGGFQ
ALAKPSLDFFGKCPELLQRLAESSEENIPLSDLLVALFYLPMRHLHEYGRLLLKLGTCFE
VSSVDYQKLQDGCSKFEALALHLKRRRKEAEYTYHFWKSFPGKMTDSLRKPPRRLICESS
NKALTLQNSGRFSVNWFILFNDALVHAQFSTHHVFPLATLWVEPIPEENTDLYGLKVISP
EETFTLLACSSMEKAKWLRSIKQAVDQAMSGAGQSGSGAGQRAEPPISRTASYTFYKDSR
LKEATYEGRWLAGKPNGRGMVKWLDGRIYTGTFKNGLEDGFGDYVMPSKTLNLNDHYQGH
WKEGKMHGIGTYKYATGELYEGSFQDNMRHGHGMLRSGTLNSSSPSVFIGQWVHDKKTGY
GVFDDITRGEKYMGMWQDDQRQGTGVIVTQFGLYYEGAFNNNKMQGTGVLLSEDNTTYEG
EFSEDWTLNGKGVLTMANGDYFEGTFTGEWGSGLKVTGSFFKPNLYDSDGDKGRAVKLGR
LAVRPEEKWRAVFEECWMRLGCEAPGQGENQRAWENIAVALTTSRRQHRDCPEMNLSQSH
NRTLESLEFNPQQHVGPVTMEKYDRIRHYLIKACDTPLHPLGRLMETLVAVYRMTYVGVG
ANRRLLLQAVNEIMSYLARIFQLVRFLFPDLPEEGGVIPEPSSDPQDKKDSNCADTQLES
PKPGRVVSSSSLLLPVLLPRLYPPLFTLYALEKEREDNVYWECVLRLNKQPDMALLAFLG
VQHKFWPVSVPVLGERTEVVSSTKDACFASATETLQQISTTFTPSDKLQVIQLTFEEITK
EVVSSLEDSFLWSMDDLFPVFLYVVLRARIRNLGSEVSLIEDLMDPCVQHGEHGIMFTTL
KACYYQIQHEKTT
NT seq
5082 nt
NT seq
+upstream
nt +downstream
nt
atgcatcagcattgccatggacaaatctcagtgatggagtcccagaggaaatggtatgca
gctccgagctctggtgaggacagttcaggggagcgaggttcgctccacacctggaagggc
tactcctgtagtgtcaccccagagagagtgctcctgtccaggcctgtgctgcaggctgcc
ctgggaacacgccatggggttctattggtggagggtgggcaggtgtacagctttggtgag
ttccgatggaaacagagccaggtctcagaggtgggccccctgaagcccgtcctagagagc
gctctcagcggccagtgcgttgtcgccgtggcagcgggcagcttccacagcggggcggtt
accgaggacggcggggtccacatgtggggggagaactccttcggccagtgtggcctgtcc
agcctcactgtagtccccaaccctactccagtggctgtcctggaccccgacaccagcccc
cctcataccatccgggtcctggagctggcctgcggggagcagcactcccttgctctctct
gcccagcacgaggtgtgggcctggggcagcggctgccagctgggcctggtcactaccatc
ttccccgtatggaagccccagaaggtggagcacctggcgggcagacacgtccttcaggtg
gcctgtggggccttccacagccttgccttggtgcgttgcctaccacctcaggaggcccgg
cggcccctgccagacaagtgtggccagtgcaaccagctgctctacaccatgacggacaag
gaggaccacgtcattatctcagatagtcattactgccccctaggggtggagttgctggct
gacggagaggccaggctggagcctggaaggtcccctccgctcaggctctggggctcccct
tcagagcccctctcctctcatacctcggcctcagcgcctggtctccatccctccataaca
gaccatacagactatgagaggaggacagtggcacagaatggggaaatcttaaccactaca
gactctgacatctctgctgctgggacagactcagatcgaactgttggcggtgtggggggt
gcagggtctcagaactccccctaccctgatgatcaggcagtgaaagaatatctcaagaaa
ctgtctgacacctcattggctgaggagactgccaagatgaccatagcaggagcaagtttt
cagcccccagcagatagccttgacctcctgacctctgacctcctccctggggtcatgcca
gtgaccaccagctctgccctcaacagcctggtctcatcctgtgcctccgccgtggccgag
agagtggtctccacctgcgaggctctgtccctgaagaagaggattaactgctactaccct
ggggttgggggtgtagcaggagcacccggtggggtgccaggagggtttccagggggcccc
gcggaggagcgggtgcgtctggaggagtctatgcaggggaagaagagctgcagcacgggg
gatatccgtgaggaggaggccgagggcctgagtcgacgtctctctctgcctggactcctc
tctcaggtgtcccccaggttactgcggagggccagccggcccagggtgcgagcggtgccc
ctcacccctgtgggagggctcccagaggcgggggagctgctcccttccctgcagaccgag
gtgtggagctgggggcgtggtgaggagggccagctaggccacggggacaacctccccagg
ctgcagccactgtgtatcaagtgcctgagcagtaaggaggtggtgcttgtggctgctggg
gcacatcactccctggccctgacggcacagtcccaggtcttctcctggggtagtaacagc
tctggccagctaggacacatggcgtgtcctactactatccctcgccttgccaagctgtct
gaggggatccgtgtatgggacgtgggtgcgggggcgcagcacaccctcctcctggccgat
ggggactgttaccagcccatcctttactatagcggacagcaggtcagagaggcggctcag
gacgcaccccaggaccagacagaggggtacagctacacccagcaaccagtgctgctcccc
ttctgcatgaacctgggctacgtgagcggtgtgtttgcggggggccagagctgcgtggcg
ctagccgaccgcaacgtcacgggtttcatcgccagcctccacgagctggctgctgccgag
aggaagttctactgcaagctgagctctgtgaagaaccaaatcctgcgacccctgttggac
ctggagtcgttgggtacagccctaggcccggcgtccacagtgctgctacagagcctggcg
aggtgttattgccgcctgtgccacctcactgggcagcactccgccttgctcaccgccaac
ctgcgccgccgtcgggaggtgaaaagcttggttatgctggagcacgccagcatcttcctg
gacacgtacaatgagtactgctgctctgtgggtaacttcctggtgatggggggcttccaa
gctctggccaagccctcgctagatttctttgggaagtgtccagagctgttgcagcggctg
gcagagtccagcgaggagaacattcctctgagtgacctgttggtggcgctcttctacctg
cccatgagacaccttcacgagtatggcaggctgctgctcaaactgggaacctgcttcgag
gtgagctcagtggactaccagaagctgcaggacggctgctctaagtttgaggccctggct
cttcatctgaagaggaggaggaaggaggcagagtacacgtaccacttctggaagagcttc
cctggcaagatgacggattccctgcgtaagcccccccggaggctgatctgtgagagcagt
aacaaggccctgacgctacagaactctggaaggttctctgtcaactggttcatcctcttc
aatgatgcactcgtccacgctcagttctccacccaccatgtcttcccattggccacactg
tgggtcgagcccatccctgaggagaacactgacctgtatggactgaaggtgatctcacct
gaggagaccttcaccttgctggcctgttcttccatggagaaggccaagtggcttcgctcc
atcaagcaggcggtggaccaggccatgagtggggcggggcagtcaggctcaggggcaggg
cagagggcggagcctcccatctcccggactgcctcctacaccttctacaaggacagccgt
ctgaaggaggccacctacgagggccgctggctggccggcaagcccaatgggaggggaatg
gtgaagtggcttgatgggagaatttacacggggacgttcaagaacggactggaggatggt
tttggagattacgttatgcccagcaagacgttgaacctgaacgaccactatcaaggccac
tggaaagaagggaagatgcacggcatcggaacatacaagtatgctacaggtgagttgtac
gagggctcgttccaggacaacatgcgtcacggtcacgggatgctgcgcagcggcacgctg
aactcctcctcccccagcgtcttcatcggccaatgggtgcacgacaagaagacgggctac
ggcgtctttgatgacatcaccagaggagagaagtacatgggcatgtggcaggatgaccag
cggcagggcacgggcgtcatagtaacccagtttggcctgtactacgagggagccttcaac
aacaacaagatgcagggcacaggggtcttgctgtctgaggacaacaccacatatgaagga
gagttctcggaggactggactctcaacgggaagggtgtgctgaccatggctaatggggac
tactttgagggcaccttcaccggggagtggggctccggcctgaaggtcaccggatccttc
ttcaaacccaacctctacgactcagacggggacaagggccgcgctgttaagctggggcgc
ctggcggtgcgtccggaggagaagtggagggcagtgtttgaggagtgttggatgaggctg
ggctgtgaggcccctggccagggagagaaccagagagcctgggagaacatcgctgtagcc
ctgaccaccagcaggagacagcacagagactgcccggagatgaacctgagtcagagtcat
aacagaactctggagagtctggagttcaaccctcagcagcatgttggccctgttaccatg
gagaagtatgaccgtatccgccattacctcatcaaggcgtgtgacacgcccctgcacccc
ctgggcaggctgatggagaccctagtggctgtctacaggatgacctacgtgggggtgggg
gccaaccgccgcctcctactgcaggctgtcaacgagatcatgtcctacctggcacgcatc
ttccagctcgtcaggttcctgttcccagatctgcctgaggagggtggagtgatccctgaa
ccatcctctgacccccaggacaagaaggattccaactgcgcagacacccagctagaatcc
cccaaacctgggcgtgtagtgagtagctcctctctgctcctgccggtgttactgcctcgt
ctctacccccctctcttcaccctgtacgccctggagaaggagagggaggacaacgtgtac
tgggagtgtgtcctccgcctcaacaaacagccagacatggccctgctcgccttcctcgga
gtgcaacataagttttggccggtttcggttccagtgctgggggagaggacagaggttgtg
tccagcacaaaagatgcctgttttgcctcggcaacggagaccttacagcagatcagcaca
acgttcacaccatccgacaagctgcaggtgatccagctgacattcgaggagatcacaaag
gaagtggtgtcatcactggaggatagcttcctgtggtccatggacgacctgtttcctgtg
ttcctctacgtggtgctgcgcgcccggatcaggaatctggggtcagaggtgagtctgata
gaggacttgatggacccctgtgtacagcatggagaacacggcatcatgttcaccactctc
aaggcgtgttactatcagatccagcatgagaagaccacatga
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integrated database retrieval system