KEGG   Oncorhynchus nerka (sockeye salmon): 115133519
Entry
115133519         CDS       T07952                                 
Name
(RefSeq) LOW QUALITY PROTEIN: alsin-like
  KO
K04575  amyotrophic lateral sclerosis 2 protein
Organism
one  Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:one00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:one03036]
    115133519
Chromosome and associated proteins [BR:one03036]
 Eukaryotic type
  Centrosome formation proteins
   Other centrosome associated proteins
    115133519
SSDB
Motif
Pfam: RCC1 RCC1_2 MORN VPS9 RhoGEF PH
Other DBs
NCBI-GeneID: 115133519
NCBI-ProteinID: XP_029522657
LinkDB
Position
LG2:7174709..7196256
AA seq 1693 aa
MHQHCHGQISVMESQRKWYAAPSSGEDSSGERGSLHTWKGYSCSVTPERVLLSRPVLQAA
LGTRHGVLLVEGGQVYSFGEFRWKQSQVSEVGPLKPVLESALSGQCVVAVAAGSFHSGAV
TEDGGVHMWGENSFGQCGLSSLTVVPNPTPVAVLDPDTSPPHTIRVLELACGEQHSLALS
AQHEVWAWGSGCQLGLVTTIFPVWKPQKVEHLAGRHVLQVACGAFHSLALVRCLPPQEAR
RPLPDKCGQCNQLLYTMTDKEDHVIISDSHYCPLGVELLADGEARLEPGRSPPLRLWGSP
SEPLSSHTSASAPGLHPSITDHTDYERRTVAQNGEILTTTDSDISAAGTDSDRTVGGVGG
AGSQNSPYPDDQAVKEYLKKLSDTSLAEETAKMTIAGASFQPPADSLDLLTSDLLPGVMP
VTTSSALNSLVSSCASAVAERVVSTCEALSLKKRINCYYPGVGGVAGAPGGVPGGFPGGP
AEERVRLEESMQGKKSCSTGDIREEEAEGLSRRLSLPGLLSQVSPRLLRRASRPRVRAVP
LTPVGGLPEAGELLPSLQTEVWSWGRGEEGQLGHGDNLPRLQPLCIKCLSSKEVVLVAAG
AHHSLALTAQSQVFSWGSNSSGQLGHMACPTTIPRLAKLSEGIRVWDVGAGAQHTLLLAD
GDCYQPILYYSGQQVREAAQDAPQDQTEGYSYTQQPVLLPFCMNLGYVSGVFAGGQSCVA
LADRNVTGFIASLHELAAAERKFYCKLSSVKNQILRPLLDLESLGTALGPASTVLLQSLA
RCYCRLCHLTGQHSALLTANLRRRREVKSLVMLEHASIFLDTYNEYCCSVGNFLVMGGFQ
ALAKPSLDFFGKCPELLQRLAESSEENIPLSDLLVALFYLPMRHLHEYGRLLLKLGTCFE
VSSVDYQKLQDGCSKFEALALHLKRRRKEAEYTYHFWKSFPGKMTDSLRKPPRRLICESS
NKALTLQNSGRFSVNWFILFNDALVHAQFSTHHVFPLATLWVEPIPEENTDLYGLKVISP
EETFTLLACSSMEKAKWLRSIKQAVDQAMSGAGQSGSGAGQRAEPPISRTASYTFYKDSR
LKEATYEGRWLAGKPNGRGMVKWLDGRIYTGTFKNGLEDGFGDYVMPSKTLNLNDHYQGH
WKEGKMHGIGTYKYATGELYEGSFQDNMRHGHGMLRSGTLNSSSPSVFIGQWVHDKKTGY
GVFDDITRGEKYMGMWQDDQRQGTGVIVTQFGLYYEGAFNNNKMQGTGVLLSEDNTTYEG
EFSEDWTLNGKGVLTMANGDYFEGTFTGEWGSGLKVTGSFFKPNLYDSDGDKGRAVKLGR
LAVRPEEKWRAVFEECWMRLGCEAPGQGENQRAWENIAVALTTSRRQHRDCPEMNLSQSH
NRTLESLEFNPQQHVGPVTMEKYDRIRHYLIKACDTPLHPLGRLMETLVAVYRMTYVGVG
ANRRLLLQAVNEIMSYLARIFQLVRFLFPDLPEEGGVIPEPSSDPQDKKDSNCADTQLES
PKPGRVVSSSSLLLPVLLPRLYPPLFTLYALEKEREDNVYWECVLRLNKQPDMALLAFLG
VQHKFWPVSVPVLGERTEVVSSTKDACFASATETLQQISTTFTPSDKLQVIQLTFEEITK
EVVSSLEDSFLWSMDDLFPVFLYVVLRARIRNLGSEVSLIEDLMDPCVQHGEHGIMFTTL
KACYYQIQHEKTT
NT seq 5082 nt   +upstreamnt  +downstreamnt
atgcatcagcattgccatggacaaatctcagtgatggagtcccagaggaaatggtatgca
gctccgagctctggtgaggacagttcaggggagcgaggttcgctccacacctggaagggc
tactcctgtagtgtcaccccagagagagtgctcctgtccaggcctgtgctgcaggctgcc
ctgggaacacgccatggggttctattggtggagggtgggcaggtgtacagctttggtgag
ttccgatggaaacagagccaggtctcagaggtgggccccctgaagcccgtcctagagagc
gctctcagcggccagtgcgttgtcgccgtggcagcgggcagcttccacagcggggcggtt
accgaggacggcggggtccacatgtggggggagaactccttcggccagtgtggcctgtcc
agcctcactgtagtccccaaccctactccagtggctgtcctggaccccgacaccagcccc
cctcataccatccgggtcctggagctggcctgcggggagcagcactcccttgctctctct
gcccagcacgaggtgtgggcctggggcagcggctgccagctgggcctggtcactaccatc
ttccccgtatggaagccccagaaggtggagcacctggcgggcagacacgtccttcaggtg
gcctgtggggccttccacagccttgccttggtgcgttgcctaccacctcaggaggcccgg
cggcccctgccagacaagtgtggccagtgcaaccagctgctctacaccatgacggacaag
gaggaccacgtcattatctcagatagtcattactgccccctaggggtggagttgctggct
gacggagaggccaggctggagcctggaaggtcccctccgctcaggctctggggctcccct
tcagagcccctctcctctcatacctcggcctcagcgcctggtctccatccctccataaca
gaccatacagactatgagaggaggacagtggcacagaatggggaaatcttaaccactaca
gactctgacatctctgctgctgggacagactcagatcgaactgttggcggtgtggggggt
gcagggtctcagaactccccctaccctgatgatcaggcagtgaaagaatatctcaagaaa
ctgtctgacacctcattggctgaggagactgccaagatgaccatagcaggagcaagtttt
cagcccccagcagatagccttgacctcctgacctctgacctcctccctggggtcatgcca
gtgaccaccagctctgccctcaacagcctggtctcatcctgtgcctccgccgtggccgag
agagtggtctccacctgcgaggctctgtccctgaagaagaggattaactgctactaccct
ggggttgggggtgtagcaggagcacccggtggggtgccaggagggtttccagggggcccc
gcggaggagcgggtgcgtctggaggagtctatgcaggggaagaagagctgcagcacgggg
gatatccgtgaggaggaggccgagggcctgagtcgacgtctctctctgcctggactcctc
tctcaggtgtcccccaggttactgcggagggccagccggcccagggtgcgagcggtgccc
ctcacccctgtgggagggctcccagaggcgggggagctgctcccttccctgcagaccgag
gtgtggagctgggggcgtggtgaggagggccagctaggccacggggacaacctccccagg
ctgcagccactgtgtatcaagtgcctgagcagtaaggaggtggtgcttgtggctgctggg
gcacatcactccctggccctgacggcacagtcccaggtcttctcctggggtagtaacagc
tctggccagctaggacacatggcgtgtcctactactatccctcgccttgccaagctgtct
gaggggatccgtgtatgggacgtgggtgcgggggcgcagcacaccctcctcctggccgat
ggggactgttaccagcccatcctttactatagcggacagcaggtcagagaggcggctcag
gacgcaccccaggaccagacagaggggtacagctacacccagcaaccagtgctgctcccc
ttctgcatgaacctgggctacgtgagcggtgtgtttgcggggggccagagctgcgtggcg
ctagccgaccgcaacgtcacgggtttcatcgccagcctccacgagctggctgctgccgag
aggaagttctactgcaagctgagctctgtgaagaaccaaatcctgcgacccctgttggac
ctggagtcgttgggtacagccctaggcccggcgtccacagtgctgctacagagcctggcg
aggtgttattgccgcctgtgccacctcactgggcagcactccgccttgctcaccgccaac
ctgcgccgccgtcgggaggtgaaaagcttggttatgctggagcacgccagcatcttcctg
gacacgtacaatgagtactgctgctctgtgggtaacttcctggtgatggggggcttccaa
gctctggccaagccctcgctagatttctttgggaagtgtccagagctgttgcagcggctg
gcagagtccagcgaggagaacattcctctgagtgacctgttggtggcgctcttctacctg
cccatgagacaccttcacgagtatggcaggctgctgctcaaactgggaacctgcttcgag
gtgagctcagtggactaccagaagctgcaggacggctgctctaagtttgaggccctggct
cttcatctgaagaggaggaggaaggaggcagagtacacgtaccacttctggaagagcttc
cctggcaagatgacggattccctgcgtaagcccccccggaggctgatctgtgagagcagt
aacaaggccctgacgctacagaactctggaaggttctctgtcaactggttcatcctcttc
aatgatgcactcgtccacgctcagttctccacccaccatgtcttcccattggccacactg
tgggtcgagcccatccctgaggagaacactgacctgtatggactgaaggtgatctcacct
gaggagaccttcaccttgctggcctgttcttccatggagaaggccaagtggcttcgctcc
atcaagcaggcggtggaccaggccatgagtggggcggggcagtcaggctcaggggcaggg
cagagggcggagcctcccatctcccggactgcctcctacaccttctacaaggacagccgt
ctgaaggaggccacctacgagggccgctggctggccggcaagcccaatgggaggggaatg
gtgaagtggcttgatgggagaatttacacggggacgttcaagaacggactggaggatggt
tttggagattacgttatgcccagcaagacgttgaacctgaacgaccactatcaaggccac
tggaaagaagggaagatgcacggcatcggaacatacaagtatgctacaggtgagttgtac
gagggctcgttccaggacaacatgcgtcacggtcacgggatgctgcgcagcggcacgctg
aactcctcctcccccagcgtcttcatcggccaatgggtgcacgacaagaagacgggctac
ggcgtctttgatgacatcaccagaggagagaagtacatgggcatgtggcaggatgaccag
cggcagggcacgggcgtcatagtaacccagtttggcctgtactacgagggagccttcaac
aacaacaagatgcagggcacaggggtcttgctgtctgaggacaacaccacatatgaagga
gagttctcggaggactggactctcaacgggaagggtgtgctgaccatggctaatggggac
tactttgagggcaccttcaccggggagtggggctccggcctgaaggtcaccggatccttc
ttcaaacccaacctctacgactcagacggggacaagggccgcgctgttaagctggggcgc
ctggcggtgcgtccggaggagaagtggagggcagtgtttgaggagtgttggatgaggctg
ggctgtgaggcccctggccagggagagaaccagagagcctgggagaacatcgctgtagcc
ctgaccaccagcaggagacagcacagagactgcccggagatgaacctgagtcagagtcat
aacagaactctggagagtctggagttcaaccctcagcagcatgttggccctgttaccatg
gagaagtatgaccgtatccgccattacctcatcaaggcgtgtgacacgcccctgcacccc
ctgggcaggctgatggagaccctagtggctgtctacaggatgacctacgtgggggtgggg
gccaaccgccgcctcctactgcaggctgtcaacgagatcatgtcctacctggcacgcatc
ttccagctcgtcaggttcctgttcccagatctgcctgaggagggtggagtgatccctgaa
ccatcctctgacccccaggacaagaaggattccaactgcgcagacacccagctagaatcc
cccaaacctgggcgtgtagtgagtagctcctctctgctcctgccggtgttactgcctcgt
ctctacccccctctcttcaccctgtacgccctggagaaggagagggaggacaacgtgtac
tgggagtgtgtcctccgcctcaacaaacagccagacatggccctgctcgccttcctcgga
gtgcaacataagttttggccggtttcggttccagtgctgggggagaggacagaggttgtg
tccagcacaaaagatgcctgttttgcctcggcaacggagaccttacagcagatcagcaca
acgttcacaccatccgacaagctgcaggtgatccagctgacattcgaggagatcacaaag
gaagtggtgtcatcactggaggatagcttcctgtggtccatggacgacctgtttcctgtg
ttcctctacgtggtgctgcgcgcccggatcaggaatctggggtcagaggtgagtctgata
gaggacttgatggacccctgtgtacagcatggagaacacggcatcatgttcaccactctc
aaggcgtgttactatcagatccagcatgagaagaccacatga

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