Oncorhynchus nerka (sockeye salmon): 115133538
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Entry
115133538 CDS
T07952
Name
(RefSeq) arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 1-like isoform X1
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115133538
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115133538
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
one04147
]
115133538
Membrane trafficking [BR:
one04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
115133538
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
115133538
Exosome [BR:
one04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115133538
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
Ank_2
PH
Ank
Ank_4
Ank_3
Ank_5
PH_11
PH_21
PH_8
PH_17
Motif
Other DBs
NCBI-GeneID:
115133538
NCBI-ProteinID:
XP_029522684
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Position
LG8:24977696..25004267
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AA seq
767 aa
AA seq
DB search
MTVKLDFEECLKDSPRFRAAIEVVEGDVCELETRLEKLVKQCHSMLEAGRAYCQTSKSFV
TGLKELGHHCSGDNMMGECLEKFSKKLAVILEAQGEVIESTQKSVKLKLLSFVKEDVRRF
KDVRKEFERGSESLEAALGRNAQAPRGKQHEVEEVSHALLNARKTFRSGALDYVLQINVI
EAKKKTDILMAMVSMMDAQSQFFQQGHQSLSELDDYRRTLSEEHTQLVLNSAREKRDMEQ
RHEAIKKKDVSYDNSLMDFCADAANGIAMEGYLYKRASNAFKTWSRRWFSIQKNQLVYQK
KFKDQPTVVIEDLRLCTVKVCVDNERRFCFEVVSPSKSCLLQADSERQQQGWISAVQNSI
ASAFQERREDPHCPREHCSSVSGGSPGGGGLCGEQEKTGGREALEEVQAIPGNMQCCDCG
EPGPDWASINLGITLCIVCSGIHRSLGVHFSKVRSLTLDSWEPELVRLMCELGNTAINRI
YEGRIDEITIKKPHPSSPRGDKESWIRSKYVEKKFIQKLPETGRKAPLRRSSARRNRANT
QERPAGSRPPLKPKPTRATLPRLAGLNQSDLVQENNTGIHKDDEDDAEEDLSGLHPGALL
YRSAALQHFPVMADALAHGADVNWVNTAEESSTPLLQAVTANSLAACEFLLQNGANVNTA
DSNRRGPLHHATILGHTGLVCLFLKRGADYNARDNNQKDPITIAVETANADIVTLLRIAK
MNKEMREMDGAFGQSGDETYQDIFRDFSHMASNNPEKLKRRSTDFKT
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgactgtcaaactggattttgaagagtgtctcaaagactccccccgattcagggccgcc
attgaagtggtggaaggagatgtctgtgaattggaaacgcgattagagaagctggtgaag
cagtgccactccatgctagaggctggcagggcctactgtcagaccagcaagagctttgtc
acagggctcaaagagctgggccatcactgttctggggacaacatgatgggggagtgtttg
gagaaattctccaagaagctggcagtgattctggaagctcagggggaagtgattgaaagc
acacagaagtcggtgaagttgaagttgctgagttttgtgaaagaggacgtgcgtcggttc
aaggatgtgcgtaaggagtttgagcggggtagtgagagtctggaggcagcattggggagg
aacgctcaggccccccggggaaaacagcacgaggtagaagaggtcagccatgccctcctc
aacgcccgcaagaccttccgctccggagccctcgactacgtactgcagatcaatgtcatc
gaggccaagaagaagaccgacatcctgatggcgatggtgtctatgatggatgcccagtct
cagttcttccagcaaggtcaccagtccctctcggagctggacgactaccgccgcaccctg
agtgaagagcacactcaactagtgttgaattccgccagggagaagagagacatggaacag
agacacgaggccattaagaaaaaggatgtgtcctatgataactccttaatggatttctgt
gctgatgccgccaacggtattgccatggagggctacctgtataagagagctagcaatgcc
ttcaagacctggagcaggcgctggttctccattcagaaaaatcaactggtctatcagaag
aaattcaaggatcagcccacagtagtgattgaggatctgcgtctttgtacagtgaaggtc
tgcgttgacaacgagagacgattctgcttcgaggtggtctctccatccaagagctgtctg
ttacaggcagactccgagcgccagcagcagggctggatcagtgctgtccagaacagcatt
gcttcagccttccaggaacgcagagaagacccacactgtcccagggaacattgcagctct
gtgtcgggaggcagcccaggaggaggagggctgtgtggggagcaggagaagacggggggc
cgcgaggctctggaggaggtccaggccatcccggggaacatgcagtgctgcgactgtgga
gagcccggtccagactgggcctctatcaacctggggatcaccctctgcatcgtctgctcg
gggatacacaggagtctgggtgtccatttctccaaagtacgctccctcaccctggactcc
tgggaaccagagctggtccggttgatgtgtgagttgggaaacacagccatcaacaggatc
tacgaggggcgaattgatgagatcaccatcaagaaaccccacccgtccagtccaaggggt
gataaggagtcgtggattcgttctaagtacgtggagaagaagttcatccagaagctccca
gagacgggacgtaaagctcccctgcggcgctccagcgcccggaggaacagggctaacacc
caggagaggccagccgggtcgcgacccccactcaaacccaaacccacccgggccaccctg
ccacgactcgcagggctcaatcagagtgaccttgtccaagagaacaatacgggcattcac
aaagatgatgaagatgacgcagaggaggacctgtctggtcttcatcccggggcgttgtta
tatcggtctgcagcgctgcagcatttccctgtcatggccgacgccctggcccacggagct
gacgtcaactgggtcaacacagccgaggagtccagcaccccactcctacaggccgtcacc
gcgaactccttggcagcgtgtgagttcctgctacagaacggtgccaatgtcaacacagca
gacagcaacaggagaggacctctacaccacgccactatactgggacacactgggcttgtg
tgtctgttcctgaagcgaggggcggactacaacgccagagacaacaaccagaaagacccc
attactatcgccgtggagacagccaacgctgacattgtcaccctgctgcgaattgccaag
atgaacaaggagatgcgggagatggatggagcctttggccaatcaggtgatgaaacgtac
caggacatcttcagggacttctctcacatggcatctaacaacccggagaaactcaaacgc
cgcagcacagactttaaaacttga
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