Oncorhynchus nerka (sockeye salmon): 115133543
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Entry
115133543 CDS
T07952
Name
(RefSeq) thyroid receptor-interacting protein 6-like isoform X1
KO
K12792
thyroid receptor-interacting protein 6
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
115133543
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Gene cluster
GFIT
Motif
Pfam:
LIM
zf_RING_Vps8
DUF7576
Motif
Other DBs
NCBI-GeneID:
115133543
NCBI-ProteinID:
XP_029522702
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Position
LG8:25058646..25063493
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AA seq
564 aa
AA seq
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MSGPTRPSPKTPGSPERPVPQMSDSGPAVYRQPPKKVSSDTRSKYVVHDQNRGGGGMATR
YLATGPTAGPMQHHHQEDPGFHPKSNDYYQPPTQGLEEDQSLNPHMDRYQLMHLAHPEKP
IGNYSNIEGEIDSLTCMLADLDSYSLSSTQLYDNVPYNKRISGDRYNPSAQPGAQSQGGP
SMGFPPHSTSHPAPPNPSDPHQGLQYFPQPDDTDAQVSKPYPQHVPASYTTASTPTVPRL
NVQVKTAQPVTYSQTGRQAEQGYTPPTHRQHTLRNSPQNLASQAQQLHYEGSYKASAAGS
AVRASQSPTPKRGPETHQSGSGSAPSSAYQPSKQGRAALRQEELDGLTKKLVYDMNHPPT
EEYLGSCARCGDNVLDDVSGCIAMEQVFHVECFTCATCHAPFRGQPFYDLDKQSYCKSCY
ISILERCFLCSKPILDRILRAMGNAYHPRCFNCVVCGCCLDGVPFTVDATSQIHCLDDFH
RKFAPRCSVCGQVIIPEPGQEETVIIVALGRNFHVNCYVCEECGLLLSSEGEERGCYPLD
GHILCKGCSTQHIQNPSTNISTDR
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtcctacccggccatcgccgaagactccgggtagcccggagagacccgtcccc
cagatgtccgactctggaccagccgtgtacagacagccgcccaagaaggtctcctcggac
acccggtccaagtatgtggtccatgatcagaacagaggaggaggcggaatggccactagg
tacttggctaccggtcccacagctgggcccatgcagcaccaccaccaagaggacccaggg
tttcaccctaaatctaatgactactaccaaccacctacccaagggcttgaagaagaccaa
tccttgaaccctcatatggaccgctaccagctgatgcaccttgcacaccctgagaagccg
attggaaactattcgaacattgagggagagattgactcgctcacctgcatgctggctgat
ctggacagctattcactaagcagcacacagctgtatgacaatgtgccttacaacaaacgc
atctcgggggaccgctacaacccctcagcccagccaggtgcccaatctcagggagggccg
tcaatgggtttccctcctcattccaccagccatcctgcacccccaaaccccagtgatccc
caccagggtctccagtacttcccccagccagacgacactgacgcccaggtctccaaaccc
tacccccagcatgtccctgcctcctacactaccgcctccacccctactgtcccgaggctc
aatgtccaggtcaaaacagcccagcctgtcacctactcccagactggtaggcaagccgag
cagggttacacccctcccacacaccgccagcacacgctgcggaactcgccccagaatctc
gcatcccaagcccagcaactgcactatgaggggagctacaaggcgagtgccgccgggtct
gcagtgagagcatcgcagagtcctactcccaaaagaggcccagagactcaccaatcaggg
tcaggctcggcaccaagctccgcctatcagcccagtaagcaggggagagcagctctgaga
caagaggagttggatgggctcacaaagaagttggtgtatgacatgaatcatccccctaca
gaggaataccttggtagctgtgcacgttgcggtgacaacgtccttgatgacgttagcggc
tgtatcgccatggagcaggtgttccacgtagagtgtttcacttgtgccacctgccacgcc
cctttccgggggcaaccgttctacgacctggacaagcagagctactgcaagagctgttac
attagtatcctagagcgctgctttctgtgctccaagcccatcctggaccgtatcctacgg
gccatgggcaatgcctaccacccgcgctgcttcaactgtgttgtgtgtggctgctgcctg
gacggcgtgcccttcaccgtggacgccacctcccagatccactgccttgacgacttccac
aggaagtttgcccctcgctgctcagtgtgtggccaggtcatcatccccgagccgggccag
gaggagacggtcattatagtggcgctgggccgcaacttccacgtcaactgctatgtgtgt
gaggagtgtggtctgctcctgtcctctgagggtgaggagcgaggctgttaccccctggac
ggtcacatcctgtgtaagggctgcagcacccagcacattcagaacccctccaccaacatc
tccactgaccgctaa
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