Oncorhynchus nerka (sockeye salmon): 115133638
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Entry
115133638 CDS
T07952
Name
(RefSeq) splicing factor 1-like isoform X1
KO
K13095
splicing factor 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115133638
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
one03041
]
115133638
Spliceosome [BR:
one03041
]
Complex A
Other components
Complex A specific factors
115133638
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Paralog
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
SLU7_N
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
115133638
NCBI-ProteinID:
XP_029522932
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All DBs
Position
LG8:complement(31720811..31733074)
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AA seq
679 aa
AA seq
DB search
MATGANATPLGKLHPSIGAKRGFDAGPGAGLMPPPGPPVAFPSIPNFQPPIPNVSFPQVH
PVFTAVAAFPTPPQPPQGAGMQPQSDFGQKKARKRSRWNSETPDQKTVIPGMPTVIPPGL
TRDQEKAYIVQLQIEDLTRKLRTGDLGIPVNPEDRSPSPEPIYNSEGKRLNTREYRTRKK
IEEERHSLITDMVALNPEFKPPADYKPPATRVNDKVMIPQDEYPEINFVGLLIGPRGNTL
KNIEKECCAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRT
ILKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQSTEPRSVTNTTLCTKCGG
AGHISSDCKFTSSFAAPRAGEPPQSAQDKARMDKEYLSLMAELGEAPVPSSGGGHSNNQN
SGHNRGSNNQPPPSRPPWMNSGQSENRNFHSMHGGHGGHGNQHGGHGNQHGGHGGHHNFP
PPMSNMGGHPMPPNNGMPPPWMQPPPPPMGQGHGHHMGLLPPPMMPPPPPPNNQPPPPPS
GPLPPWQQQAPPPPPTSNMATSAPLPWQQNTTTTSSPGTGNLPPWQQPQQSAASAAQPPP
PMGNPSMVPPPPGVQPPLPPGAPPPPPPPPPGSAGMMYAPPPPPPPMDPSNFVTMMGMGV
PGMPPFGMPPAPPPPPPQN
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggctacgggagcgaatgcaacccctctagggaagctgcacccgagtatcggcgctaaa
cgaggttttgatgctgggcctggtgcggggttgatgcctccacccgggcctcctgtggcc
tttccttcgataccgaattttcagccaccaattcccaacgtgtctttcccgcaagttcac
cccgtgtttactgcggtggccgcttttcccaccccaccacaaccaccccaaggtgccgga
atgcagccccagtcagacttcggtcagaaaaaagccaggaaaaggagccgctggaatagt
gaaacacccgaccagaagacagtcattcctggtatgcccaccgtcatcccgcctggactg
actcgggatcaggagaaggcctatatagtccaactgcagattgaagacctgactcgtaaa
ctgcgtacaggagacctgggaatccctgttaaccctgaggacagatccccgtctccagag
cccatctataacagcgagggcaagaggctgaacaccagggagtaccgcacacgcaagaag
atcgaggaggagcgtcattccctcatcaccgacatggtggcactcaaccctgagttcaag
ccccccgctgactacaagcccccagctaccagagtcaacgacaaggtgatgattccacag
gacgagtacccagagatcaactttgttggcctgctgattggaccacgtggcaacaccctg
aagaacatagagaaggagtgctgtgccaagatcatgatccgtggtaagggctcggtaaag
gagggcaaggtgggccgtaaggatggccaaatgctgccaggggaggacgagccgctgcac
gccctggtcaccgccaacaccatggagaacgtcaagaaggctgtggaacagatccgcacc
atcctgaagcagggcatcgagacccctgaggaccagaacgacttgaggaagatgcagctg
agagagctggccagactcaacggaaccctgagagaggacgacaacaggatcctacgtccg
tggcagagcactgaaccccgcagcgtcaccaacaccaccctttgtaccaagtgtggcggt
gcaggccacatctcctcagactgcaagttcaccagctcctttgctgcgcccagggccggt
gagcccccccagtctgcccaggacaaggcccgtatggacaaggaatacctgtccctcatg
gcggagctgggcgaggcccctgtaccctcctctggtgggggacactccaacaatcagaac
agcggccacaacagaggcagcaacaaccagccaccgccgagccgtcctccctggatgaac
tctggccagtctgagaacaggaacttccacagcatgcacggaggccacggtggtcatggc
aaccaacacggtggtcatggcaaccaacacggtggtcacggaggccaccacaacttccca
ccccccatgtccaacatgggaggacaccccatgccccccaacaacggtatgccacccccg
tggatgcagcccccaccgccccccatgggccagggacacggacaccatatgggtctgttg
cctccacccatgatgccaccaccaccacccccaaacaaccagcctccccctccaccctcg
ggtcccctgcctccatggcaacagcaggcccctccgccccctcccaccagcaacatggcc
actagtgcaccactgccatggcaacagaatacgaccacaacgtccagtcctggcactggc
aacctgcccccctggcagcagccccaacagtccgctgcctcggctgcccagccccctccc
cccatgggaaacccctccatggtcccccctccgcccggagtccagccccctctccccccc
ggcgccccacctccccctcctcccccaccccccggctcggccggcatgatgtatgcccct
ccacctccccctccgcccatggatccctccaactttgtcaccatgatggggatgggggtg
ccaggaatgccccccttcggtatgccccctgcgcctccaccgccacccccccaaaattaa
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