Oncorhynchus nerka (sockeye salmon): 115133647
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Entry
115133647 CDS
T07952
Name
(RefSeq) metastasis-associated protein MTA2-like isoform X1
KO
K11660
metastasis-associated protein MTA
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115133647
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115133647
03036 Chromosome and associated proteins [BR:
one03036
]
115133647
Transcription factors [BR:
one03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
115133647
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Chromatin remodeling factors
NuRD complex
115133647
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTA_R1
BAH
ELM2
Myb_DNA-binding
GATA
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
115133647
NCBI-ProteinID:
XP_029522956
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All DBs
Position
LG8:31888642..31921415
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AA seq
670 aa
AA seq
DB search
MAANMYRVGDYVYFENSSSNPYLIRRIEELNKTANGNVEAKVVCLFRRRDISGNLNTLAD
SNARDFEEESKQPTVSEQQKHQLKHRELFLSRQFESLPATHIRGKCNVTLLNETDVLAGY
LEKEECFFYSLVFDPVQKTLLADQGEIRVGSKYQAEIPDKLAEGEEDTRIQEKLEVKVWH
PDNQLKDPQIDQFLVVARAVGTFARALDCSSSIRQPSLHMSAAAASRDITLFHAMDTLQK
NDYDLAKAMSTLVPQGGPVLCRDEMEEWSASEAMLFEEALEKYGKDFNDIRQDFLPWKSL
ASVVQFYYMWKTTDRYIQQKRLKAAEADSKLKQVYIPTYTKPNPNQIMAPGNKPGMNGAA
GFQKGLSCESCRNLPSVAAAQSAQWYAWGPPNMQCRLCASCWIYWKKYGGLKTPTQLEGA
ARSGSESTPRGHMTRQEVQGLSPFTTSGGRAKLLAKNRQTFILQTTKLTRIARRVCTDIL
QPRSAARRPYASINANAVKAECMIRLPKATKAPIKNCSIPRPPLATIVKELAIQAPLKLK
APRGTPTPINRNQANQPRGGSALLGKRPFDSSALALPFPTNGRPFTSGMRTTSQSVIKRQ
KVNQGDAPNPVVFVATKYTRALRKHLTQSEMRRAARKPHLPVRVKLPLPPRPLALAILPS
STSEPIVLED
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaacatgtaccgagtgggagattacgtgtactttgagaattcctccagcaac
ccttacctgatccgcagaatagaagagctcaacaagacggccaatgggaacgtggaagcc
aaggtggtgtgtctgtttcggaggagggacatctcgggcaacctcaacactctggccgac
agcaacgcaagagactttgaggaggagtccaagcagcccacagtgtctgaacagcagaaa
caccagctgaaacacagagaactcttcctctctcggcagtttgagtctttaccagccact
cacataagggggaaatgtaacgttacactcctcaacgaaacagacgtcctcgccgggtac
ctggagaaagaggagtgtttcttctactcgctggtgtttgacccggtccagaagaccctg
ctggcggaccaaggagagattcgggtgggctccaagtaccaggccgagatccccgacaag
ttagccgaaggtgaagaagacacccgtattcaggagaagctggaggtcaaggtgtggcac
cccgacaaccagctcaaagacccacagatcgaccagtttctggtggtggctcgtgctgtg
gggacgtttgcccgagccctggactgcagcagctctatccgtcaacccagcctgcatatg
agtgctgcggccgcctcccgagacatcacgctgttccatgcgatggataccctgcagaaa
aacgactacgacctggccaaggccatgtccacgctggtgcctcagggcgggcccgtgctc
tgccgtgacgagatggaggagtggagcgcctcggaggccatgctgttcgaagaggccctg
gagaaatatggcaaggacttcaacgacatccgccaggactttttgccatggaagtcacta
gccagcgtggttcagttctactacatgtggaaaaccaccgaccgctacattcaacaaaaa
cgactcaaggcagcggaagcagacagcaagctgaagcaggtttacatccccacctacacc
aagcccaaccccaaccagatcatggctcctggtaacaagcctggcatgaacggggccgct
ggcttccagaaaggactgagctgtgagagttgccgtaacctcccctctgttgcagccgcc
cagtcagcacagtggtacgcgtggggtcctcccaacatgcagtgcagactgtgtgcatcc
tgctggatctactggaagaagtacggaggcctgaagacccccacacagctagagggggcc
gcaagatctggctcagagtcaaccccccgaggtcacatgacccgccaggaagtgcagggc
ctgtcaccgttcacgactagtggggggcgggccaagctgctggccaaaaaccggcagacg
ttcatcctgcagaccaccaagctgacgcgcatcgcccgccgtgtctgcactgacatcctg
cagccccgcagcgccgcacgccgcccctacgcctccatcaacgccaatgccgtcaaggcc
gagtgtatgataaggctgcctaaagcgaccaaggcccctataaagaactgctcgatccct
cggccaccgctggccaccatagtgaaggaactggccatccaggctccactcaagctgaag
gcccccagaggcacccccacccccatcaaccgcaaccaggccaaccagccccgcggggga
tcggccctgcttgggaagaggccctttgacagcagcgcgttggcactgccgttccccacc
aatgggaggccgttcacatcaggcatgaggaccacctctcagtcagtgatcaagcgtcag
aaagtgaaccaaggagacgcgccaaaccctgtggtttttgttgctactaaatacaccagg
gctctgaggaaacacctgacccagtctgagatgcgacgggcagccaggaaaccacacctc
cccgtcagggtcaagctgcccctgcctccccggcccctggctttagccattctgccctcc
agcaccagcgagcccatcgtcctggaggactaa
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