KEGG   Oncorhynchus nerka (sockeye salmon): 115133650
Entry
115133650         CDS       T07952                                 
Name
(RefSeq) ras-related protein Rab-1B
  KO
K07874  Ras-related protein Rab-1A
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:one00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    115133650
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:one04131]
    115133650
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:one04147]
    115133650
   04031 GTP-binding proteins [BR:one04031]
    115133650
Membrane trafficking [BR:one04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Rab GTPases
    115133650
 Autophagy
  Other autophagy associated proteins
    115133650
Exosome [BR:one04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   115133650
  Exosomal proteins of other body fluids (saliva and urine)
   115133650
  Exosomal proteins of colorectal cancer cells
   115133650
GTP-binding proteins [BR:one04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab1/35 [OT]
    115133650
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 RsgA_GTPase Gtr1_RagA SRPRB AAA FeoB_N AAA_7 ABC_tran AAA_16 PduV-EutP Septin AAA_29 AAA_22 LANC_like AAA_5 CRAL_TRIO_2
Other DBs
NCBI-GeneID: 115133650
NCBI-ProteinID: XP_029522965
LinkDB
Position
LG8:32032714..32049454
AA seq 201 aa
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ
IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYNNVKQWLQEIDRYASENVNKLLVG
NKCDLTTKKVVDYTTAKEFADSLAIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATAG
GDKPNLKIDSTPVRQSGGGCC
NT seq 606 nt   +upstreamnt  +downstreamnt
atgaatccagaatatgactacctgttcaagctcctccttattggtgactccggtgtggga
aagtcctgtcttctgctccgctttgctgatgacacctacacggagagctacatcagcacc
atcggtgtagacttcaagatccgcaccatcgagctggacggcaagaccatcaaactacag
atttgggacactgctggtcaggagaggttccgcaccatcacctccagctactacagaggc
gcccacggcatcatcgtggtctatgatgtcacagatcaggagtcgtacaacaatgtgaag
cagtggctgcaggagatcgatcgctacgccagcgagaacgtcaacaagctgctggtgggg
aacaagtgtgacctcaccaccaagaaagtagtggactacacaacagccaaggaatttgct
gactccctggccatccccttcctggaaacgagtgccaagaacgccaccaatgtggagcag
gccttcatgaccatggctgctgagatcaagaagaggatgggccccggggccacagctgga
ggggacaagcccaacctgaagatagacagcacccctgtcaggcagtctggaggggggtgc
tgttaa

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