Oncorhynchus nerka (sockeye salmon): 115133678
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Entry
115133678 CDS
T07952
Name
(RefSeq) protocadherin-7-like
KO
K16498
protocadherin delta 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
115133678
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
one01009
]
115133678
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
one04515
]
115133678
Protein phosphatases and associated proteins [BR:
one01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115133678
Cell adhesion molecules [BR:
one04515
]
Cadherins
Protocadherins
115133678
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Mid2
TMEM154
KIAA1549
Adeno_E3_CR2
Motif
Other DBs
NCBI-GeneID:
115133678
NCBI-ProteinID:
XP_029523025
LinkDB
All DBs
Position
LG8:34108274..34112304
Genome browser
AA seq
1026 aa
AA seq
DB search
MRTTGAVDYLCYSILILQLLNQPAAKQVLRYRLAEEGPADVRVGNVAVDLGIVAGSGEVT
FTLESGSDFFKIDNITGELTTNERRIDREKLQQCQMIFDENECFIDFEVSVIGPAQSWVD
LFEGKVIILDINDNTPSFPSPVLTLSVEENRPIGTLYLLPTATDRDFGRNGIERYELIQD
SGESSRRLGSSSGGRGADRRFDEGAGRSSVFELQVADTTDGEKQPQLIIKGALDREQRDS
YELTLRVRDGGDPPRSSQAILRVMITDVNDNSPRFEKAVYEADLPENSSPGAPILQLKAA
DADVGVNGQIEYVFGAATESVRRLLRLDESSGWLSVLHRIDREEVSQLRFTVMARDRGQP
PKMDKATVVLNIKDENDNVPAIEIRKIGRIFLKDGVANVAEDVVVDTPIALVQVSDRDQG
ENGIVTCTVVGDVPFQLKPASEIEGEMNKKKYFLHTSAPLDYEATQEYNVVIVAVDSGSP
SLASNNSLIVKVGDFNDNPPIFSQNVVEVSFPENNAPGERVTTVQAIDADSGKNAEIAYS
LDSSVNGIFSINADNGDIRVNTILDREQTERYQFKVIAKDKGMPILQGSATVVVLVADKN
DNEPKFMQDVFTFYVKENLTPNSPVGMVTVIDADKGQNAEMSLFIEEEEEIFSIENDTGT
IFSTMSFDREQKTTYTFRVKAVDSGDPPRSATATVSLFVMDENDNPPTVTFPINSSYTLL
PPSSNVRTVVRTVMATDTDTGINADLNYSIIGGNPFKLFEIDGGSGVISLVGKLEQKHYG
LHRLVVQVNDSGQPSQSTTTMVHVYVNETLSNSTIVEAQVAKSLGTPLNTNIAGDPNYDL
GKQRLSIVIGVVSGIMTVILIILIVVMARYCRPKNKNGYEAGKKDHEDFFTPQQHDKGKK
PKKNKKNKQPLYSSIVTVEASKPNGQRYDGVNEKLSDSPGMGRYRSVNGGPGSPDLARHY
KSSSPLPTVQLHPQSPTAGKKHQAVQDLPPANTFVGTGDNISLGSDHCSEYSSQTINKYN
KQRNAS
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgaggactactggcgcagtggactatttatgctacagtatactcatcctgcagctgctg
aatcagcctgctgctaagcaagtgctccgatatcgcttggctgaggagggacccgcggat
gtcagggtagggaacgtagccgtggacctcggaatcgttgccgggtctggcgaggtgaca
tttaccctcgagtccggatctgattttttcaaaatagataatataacaggcgagctgacc
accaatgaacggcggatagaccgtgaaaaattacagcagtgtcaaatgatatttgatgaa
aacgagtgtttcatagattttgaagtgtcagtaattggaccggcgcagagctgggttgac
ctgtttgaggggaaagtcattattttagatataaatgataacaccccgtctttcccatct
cccgtgctgaccctatcggtggaggagaacaggccgattggcactctctatctcctaccc
acggccaccgacagagatttcggtaggaacggaattgagagatatgagcttattcaagac
agcggggagagctccaggcgcctgggctccagctcaggtggtcgcggggctgacaggaga
ttcgacgagggggcaggcaggagcagcgtctttgaactgcaagttgctgacacaaccgac
ggggagaagcagccgcagctcatcattaaaggggcactggacagggagcagagggactcg
tatgagctcaccctgcgtgttagggatgggggcgaccccccacgctcttcccaggccatc
ctgagggtgatgatcactgatgtgaatgacaacagcccccgctttgagaaggctgtgtat
gaggctgacctgccggagaacagctcccctggtgcccccatcctgcagctgaaagcagct
gacgcagacgttggggtgaacggtcagattgagtacgtattcggcgcagccacagagtca
gtgcgtaggctgctgaggctggacgagagctctgggtggctgagcgtgctccatcgtatt
gaccgcgaggaggtgagccaactgcgcttcactgtgatggcgagggaccgaggccagccg
cccaaaatggacaaggccaccgtggttctcaacatcaaggatgagaacgacaatgtgcca
gctatcgagattcgtaagatcggacgcatcttcctgaaggatggagtggccaacgtggct
gaggatgtagtggtggacacgcctatagctttggtccaggtgtcagaccgcgaccagggg
gagaacggcatcgtgacctgcaccgtggtgggtgacgtgcccttccagctcaaaccggcc
agtgagattgagggtgagatgaataagaagaaatacttcctccatacatcagcgccgctg
gactacgaggccacacaggagtacaacgtggtcatcgtggcggtggactcaggaagccct
agcctggccagtaataactcgctcatcgtaaaggtgggcgacttcaacgacaacccaccc
atctttagccagaacgtggtggaggtgtcctttccagaaaacaatgcccccggcgagagg
gtgaccactgtacaggccatagatgctgatagtggcaagaacgcggaaatcgcctactcc
ctcgactcctctgtgaatgggatattctccattaatgccgacaacggtgacatcagagta
aacaccattctggacagagaacaaacagagaggtaccagttcaaagtgatagctaaagat
aagggcatgcccatactccaggggtcagccactgtggtagtcttagtggctgataagaat
gacaatgagcctaaattcatgcaggatgtgttcaccttctacgtcaaagagaaccttaca
cccaacagccctgttggcatggtgaccgtcattgacgccgacaaaggccagaacgcagaa
atgagcctcttcatcgaggaagaggaggagatcttctccattgagaacgacacaggaacc
attttctccaccatgtcgtttgaccgcgagcagaaaaccacctacacgttccgggtcaag
gctgtggacagcggagacccacccagatcagccactgccaccgtgtcactcttcgtgatg
gacgagaacgacaacccgccaaccgttaccttccccatcaatagctcatacaccctcctg
cctccctccagcaacgttaggactgtagtacgaactgtcatggccaccgataccgacaca
gggatcaacgctgacctaaactacagtatcattgggggcaaccctttcaaactgtttgag
atcgacgggggaagtggggtcatctcactggtggggaagctggagcagaaacactatggc
ctccacagactggtggtccaggtgaacgacagtggccagccctcgcagagcaccaccacc
atggtgcacgtctatgtcaacgagaccctctccaactccaccatcgttgaggcccaggtg
gctaagagcctgggcactccgctcaataccaacattgccggtgaccccaactacgacctg
ggcaagcagcgactgagcattgtcatcggtgtggtgtctggcatcatgacggtaatcctc
atcatcctcatcgtggtcatggctcgctactgccgccccaagaacaagaatggctacgag
gcgggcaagaaggaccacgaggacttcttcacccctcagcagcatgacaagggcaagaag
cccaagaagaacaagaagaacaaacagccgttgtacagcagcattgtcaccgtcgaggcc
tccaagcccaacggccagcgctacgacggcgtcaacgagaagctgtccgacagccccggg
atgggcaggtaccgctccgttaacggagggcccggaagcccggatttggcccggcactac
aagtccagctcgccactgcccacggtccagctccacccccagtcgcccacggccgggaaa
aagcatcaggctgttcaggacctgccccctgccaacaccttcgttggcaccggagataac
atttcccttggatctgaccactgctccgagtacagcagtcaaaccatcaacaagtacaac
aaacagcgtaatgcctcctga
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integrated database retrieval system
