Oncorhynchus nerka (sockeye salmon): 115133682
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Entry
115133682 CDS
T07952
Name
(RefSeq) FRAS1-related extracellular matrix protein 2-like
KO
K23383
FRAS1-related extracellular matrix protein 3
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
115133682
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Calx-beta
Frem_N
DUF2685
Motif
Other DBs
NCBI-GeneID:
115133682
NCBI-ProteinID:
XP_029523028
LinkDB
All DBs
Position
LG8:complement(34973401..35045906)
Genome browser
AA seq
3027 aa
AA seq
DB search
GTNWHQYHHRPRPQPGSIILGNRGLKVPRGSWAYLDPLCDLVTRVLPGDSCYVTVFDRAV
IPGTLTPKKFPCAFEKGQVKYVHFGSKVITRDTVRLQVRYDTQTDTLVIPLTLEVEATAN
GREVVTTNTPLIVSELDRISSAINGQSLVIPFSGSGFGSAGSSGSASRCKLTLLIGTGGF
PRHGTLLNYVTNGQPTDCHAFVNMGVRYKLTPTSDSPYIDYIPMLAELLDQHGRATQQEY
FLITVRIREGITNSPPRPSFLTMMMMLEVDQFVMTAITSDVLAAEDAESASDDLIFNILT
PLAPDQGDIISTDDQNQPIASFRQRDVKDLKIAYRPPAEDSGRPSERIVHVEMEVVDSDG
GASERFSFMIVVKPMNTLAPVVTINTGQMLFKGQSRPLSSNHNLRISDEDNLSDVRITVL
RGCKHGVLTVLGSPLGSPRQREFFTPAQLDSGLVVYEHDGSETFSDNILFRMTDGQLHVD
FLFPVTIVAMDDEAPVINVNTGLILSRKETKMISSVVLSATDVDSEVSTVKFVLVAPFST
IGQVFLRQSHPPVDLTGWTFNTAERIYECVVTEWLQRDVTEGRVFYQHTGPQLTSTFTDQ
LAFRCQDDNVPPNQSGDNMFLVGIHPVDDLAPEPFPGSTLVLTVNEYQLTPIQKTCLQFT
DLDSDDSDDLRYIIVIPPTNTDQNDPTPLGHIVLTDNPNVVVTEFTQAQVNHLKVAYKPP
DLELGTTPRVVQFTFIVKDPVGHSVDGVFTINLQPVDNKPPVTKTGVDLDVNVKNTYVFT
KDVLDATDQDTSADSITFIVTQVPKFGVLRCVGVDLSVWNYFTLADIHRGVVVYIHRGNG
PGSDVVKVDVSDGYHKVPVTIRINVVTPAVVATPPTAPPTLRELHIIIEVNENGQIQITG
DKVQVSGRMHVDDLTFLIEQPPRFGVVQVQGVPSDRLTLRDIIDGQVTYVHTSGEVGPGK
HNDTFTLTVIGPWISGGNRVIQKVKVQVSILPVDSVPPIISVGDLLKVTEGEKKVVTVEN
IRVEDSDTDVDVVLCTILVQPTFGYLEITSASPGSEKSRAGIAVMAFHYREVRLGNVVYV
QSIHKGTEPFEDRTTIQCSDGINQSEMSILTFVILPDNDEEPQVFTGEFVVMEGMSLAVD
VPILNVVDLDVPGDVLEFEVVVPPKHGKIVQHLATGTVIVVTFTLDQIRTGSTIVYEHDG
SETRHDNFSVKVTDGKHVVEKEVIVTVIPVDDETPRLAINTGLEVEFREWKVITNKILKA
TDLDSEDGTLMFIIRRDPEQGCLQRLVASRKVLLNMTVGMNFTQDDLDSGLIRYIHTGLG
GVRDLVKFDVTDGVNPLIDRYFYVTVGGVDAVFPVVVVNRGVSLKEGGRALLTTDLLSTS
DLNSPDEHLTFTLTRDPARGRLEVTDRPGVAITTFTQLQLAGSKVLYVHTAEDEARMDSF
QFQITDGRNVVYRTFRVSITDVDNKKPVLTIHRLRQLGLLFTSKVLRVVNQEDRRGQGTK
ERGQPRNDITFWVSEAPRWGVIVNTALGNGSVSSFTQDDIDQRRICYILPAGVKSTSDVF
YFTVQYNGGNRVTQQPFRVQWAWVSMDTRLYMVQESSQFLEVTLRRRGHLGETSFVTVSV
HDITTERGQDYQASPPRQVQFNPGQTQAVWRLRIHDDQVYEGTESFRLVLSEPVMALIGQ
SNSVTVEILDPEDVTSVYPQLEFRVEEDVGEVLIPVRRTGDLSNELTVLCYTQEGSARGT
VPSTVLSYSDYIARPEDQRSALRFDRGDAERACRVLVIDDSLYEGAETFAVTLGDAMGGL
VRAEHNSTRVVILPHTPDEPVVYLGRSEYLVDESCGYLEVSVWRSGTDLSHNASVTLRSR
PTQPVSALAGLDYVGIGQSVDFPPGITVVTVKVAILDDLGGPVMEGEESFQLVLSMPNNS
SLGRPSLATITINDTMSDLPRVQFGEVELRVDEADGRAVAVVTRDGDLGLTSVVRCYTRQ
GSAQVMMDYEERPDTDASVVTFRPGEREQQCIVTLVDDLEFEEEEEFRLVLGIPSSQSDL
GLSLGDQKEIVIRITDSRDKSVIRFSEPRYTVSEPVAHGEITVLRVAVRRHGDVSRVSVV
RVHTKDGSAHSGQDYNPLSQELVFSEGQTEHLVEVEVLYDDEGEMRETFTLQLTPDQHMV
ADTQVTKATVFIEEKEGGDVGGITFPAVPLVVSLLVYDDPTLASTPTSPHPPTGYPLVCV
TACDPRYPDYSRTLSLCVSEGINNTLTEYRWLLGSPGTPDGVASPPRELDAGTFLTSTRS
MLLDAVYLQAGVRVQCSARAVSTPGRGGLGLTSPQVEVSMEEGLCPPHTPGAIGAEPFSA
KIRYTGPDDPQHPNLIRLTVTMPHVDGMLPFISTRPLSNLALTLNHDPSRLGNHRCSNLQ
GGPGDASATRLGLTSAGVAVAGVVGGSHLRNTGAQTELLSPWFLSQSLEPGNCVWSSLVT
DYSISDSVPDVGGTEGTDEPIFSGYYSISDLLSDCGGTVRTDGQVLNAVQSYVTLRVPLF
VSYVFHSPSAPGGWLTFDLRSDLRMTFTYVSDPVPVEFSLNTVLVLLSKRELWLSDGSMG
FGQDDDVAAGHEWYIHAVYTVRSRDHGNRNYNNHNHAVGKRSLFLQHHVISSRGRQKRAA
PEKERGQDQDRGTNLRHVHLQRAPSLGQSWAEGPLMDWELQERGEGPVGSPERETLDGAK
ASVTLAVVVLVPPSTPRPPSTLPGPLLPSQAPSTLPGPVYPPSPRLPSQAPFYPPRPPFY
PPRPPFYPPRPRLPPQAPSTLPGPIYPPRPRLPFYPPRPCLPFYLPGPCLPSQAPFYPPR
PRLPFQGPLPSQGPVYLPGPVSLPVLPSHGPLLTLPGPVYPFYPPRPRLLPSPFYPARPA
TPQPRLPLYPPQAPFLPSPAPSTPPGPPSYPPRPVLTLPGPVLPSQAPSTLPGPVYPPRP
RLPLPGGAPFYPPSPVYLPGPLLPSQPPVYPPCPRVYPPRPRRLPSQAPVYLPRPPSTLP
GPVYPPRPPSTLPGPRLPSQAPVYPPR
NT seq
9086 nt
NT seq
+upstream
nt +downstream
nt
aagggaccaactggcaccagtaccaccatcgcccccgaccccagccagggtccatcatcc
tgggcaacagagggctgaaggtcccccgggggagttgggcctacctggatcctctctgtg
acctggtgaccagagtccttccaggcgactcctgttacgtcacagtcttcgaccgcgctg
tcataccgggaacactcaccccaaagaagttcccgtgcgcgttcgagaaaggccaggtga
agtacgtgcatttcgggtcaaaggtcattaccagggatacggtgaggttacaggtgaggt
atgacacgcagacggacacgctggttataccgctgaccttagaggtcgaggcgaccgcga
acggtcgagaggtcgtgaccacgaacactccgctgatcgtgagcgagctggacaggatct
ctagcgccatcaatggtcagagcttggttattccattcagcgggtccggtttcggttccg
ccggttcctccggttccgcgtcgcggtgtaaactcaccttgttgatcggaacgggcggtt
tccccagacacggaactcttttgaattacgtcaccaacggtcaaccgacggactgccatg
ctttcgtcaacatgggtgttcgttataaactcacccctacctctgactcaccttatatcg
actacatccccatgctagcagagttactagaccaacacgggagggccacacagcaggagt
acttcctcatcacagtcaggatccgagagggtatcaccaacagccctcccagacccagct
ttctcaccatgatgatgatgttggaggtggaccagtttgtgatgacggccatcaccagtg
acgtgttggcagcggaagacgcagagtccgcctctgatgacctcatcttcaacatcctca
ctccattggctccagaccaaggtgacatcatcagcacggacgaccagaaccagccaatcg
cgtcgttccgtcagcgggacgtcaaagacctgaagatcgcctacagacctccagcagagg
attctggtcgtccctctgagaggatcgtccatgtagagatggaggtggtggattcagacg
ggggcgcttcagaacggttctccttcatgatagtagtcaaacccatgaacacactggctc
ctgtagtcaccatcaatactggacagatgctgtttaagggccagtccagaccgctgtcgt
ccaaccataacctccgaatcagcgacgaagacaacctgtcagacgtcaggatcaccgtcc
tccgaggatgtaaacacggcgtcctgacagtcctcgggtcgcctctcgggtcaccgcggc
aacgggagttctttacgccggcgcaactcgacagcggattggttgtctacgaacacgacg
gttccgaaacgttctccgataacatcctgttccgcatgacggacgggcaactccacgtcg
acttcctgttcccagtgacgattgtcgccatggacgacgaggctccggtcatcaatgtca
acaccgggttgatcctgtcgcggaaggagaccaagatgatatcatcggtggttctaagtg
cgacggatgttgattctgaagtctcgacagtgaagtttgtgctcgtggcgccgttctcga
ccatcggacaggtgtttctcagacaatcacacccacctgtggacctcaccggatggacat
tcaacaccgccgagcgaatctacgaatgcgtcgtcaccgaatggctccaacgagacgtaa
cagagggtagggtgttctaccaacacaccggacctcaactcacctccaccttcactgacc
aattagcgttccgttgccaggacgacaacgtccctcccaaccaatcaggcgacaacatgt
tcctcgtcggaatccacccggtcgacgacctcgcaccggaacccttccccggttccactc
tagtcctgaccgtcaacgagtaccaactcactccgatacagaagacgtgtttacagttca
cagacctagactctgacgactctgatgacctgaggtatattatcgttatcccacccacta
acacagaccagaacgacccaacaccactgggccatatcgtcctgaccgacaaccctaatg
ttgttgtcactgagttcacccaggcacaggtcaaccacctcaaagtagcctataagccac
cagatctggagttgggaaccacacctagagtggtccagttcacctttattgtgaaagatc
cagtaggacactctgtagatggagtctttactatcaacctgcaaccagtggacaacaaac
ccccagtcaccaaaactggtgtcgacctcgacgtcaatgtaaagaatacgtatgtgttca
ctaaggatgtgttggatgctacagatcaggatacgagtgctgatagtatcacgttcatcg
tgacccaggttccaaagtttggcgttctgagatgtgttggtgtagatctgtccgtgtgga
actatttcaccctagcagacatccacaggggtgtggtagtgtacattcaccggggtaacg
gtccagggagtgacgtcgtaaaagtggacgttagcgatggataccacaaggttcccgtga
cgatcagaatcaacgttgttactccggctgtcgtggcaacgccaccgacggcccctccaa
cactgcgagaactccatataatcatagaggtaaacgagaacggacagattcaaatcacag
gagacaaagtccaggtcagcggcaggatgcacgttgatgacctcacctttctcatcgaac
aacctcctcgcttcggggtcgtccaggtgcagggcgtgccctctgataggctgacgctgc
gtgacatcattgacggccaggtgacctatgtccacaccagcggcgaggtcggacctggga
aacacaacgacaccttcacgctcaccgtgattggtccgtggatctccgggggcaacaggg
tcattcagaaggtcaaagtgcaggtgtcgatacttcctgttgacagcgttccacccataa
tcagtgtcggggatctgttaaaggtcacggaaggagagaagaaggtggtaacagtagaga
acatcagagtagaagactctgacactgacgttgacgttgttctctgtaccatcctggtcc
agccgacattcggatacttagagatcacctcagccagtcctggctcggagaagtccagag
cgggaatcgctgtgatggcgttccactaccgagaagttcgactcgggaatgtcgtctacg
ttcagagtatacataaaggaacggaacccttcgaggataggacgacgatccagtgttcag
acggtatcaaccaatcagagatgagcattttgacctttgtgatcttgccagacaatgatg
aggagcctcaggtgttcacgggagagttcgtggtcatggaagggatgagcctcgctgtcg
acgttccgatcctcaatgtggtcgacctcgacgttccgggcgatgttttggaattcgagg
tcgtggttcctccaaaacacgggaagatcgtccagcacctggcgacagggaccgttatcg
ttgtgacgttcaccttggatcagatccgaaccggttccaccatcgtctacgagcacgatg
gttctgagacgagacacgacaacttctcggtgaaagtaacggacgggaaacacgtcgtag
agaaggaggtcatcgtcacggtgataccggtcgacgacgagacccctcgcctggcgatca
acactgggctggaggtggagttcagggaatggaaagtcatcaccaataagatcctcaaag
ccaccgatctggactccgaggacgggactctgatgtttatcatccgcagggatccggagc
agggctgcctgcaacgtttagtcgcttcacgtaaggttttattaaacatgacggtgggta
tgaactttacccaggatgacctcgactctggtctgatccgctacattcacactgggctcg
gaggagttcgtgacctcgtcaagttcgacgtcaccgacggcgtgaacccgttaatcgacc
ggtacttctacgtgacagtcgggggggtggacgcggtgttcccggttgtcgtggtgaata
ggggcgtgtcgttaaaagagggggggcgggcgctcctcaccacagacctcctcagcacct
ccgacctcaactcccccgacgagcacctgacctttaccctgacccgtgaccctgccagag
gtcgtttagaggtcacggaccggcccggcgtcgccatcacgacgtttacacagctccagt
tggcggggagtaaggtgttgtatgttcacacggcggaggacgaggccaggatggacagct
tccagttccagatcacagacgggcgtaacgtggtctaccggaccttcagagtctccatca
cagacgttgacaacaagaagcctgttctgaccattcacaggttacgacagttggggctgc
tgttcaccagtaaggtcctgagagtggtgaaccaagaggaccggaggggccaggggacca
aggagcgaggccagcccaggaatgacatcaccttctgggtgtcagaggcaccgcgctggg
gggtcattgtcaacacagctctggggaacggcagtgtcagctccttcactcaggatgata
tcgaccagagaaggatctgttatattcttcctgctggagtcaaatctaccagtgatgtgt
tctacttcaccgtccaatacaacggaggaaaccgtgtgacccagcagccattccgggtcc
agtgggcctgggtttccatggacacacggctctacatggtgcaggagagctcgcagtttc
tagaggtcactctgaggaggaggggccatctgggggagacgtctttcgtcactgtcagcg
tgcatgacatcacaacggagagagggcaggactaccaggcctcgcccccgagacaggtgc
agtttaaccccggtcagacccaggccgtctggcggctgcgtatccatgatgaccaggtgt
atgagggtaccgaaagcttccgattggtcctgtctgaaccggtgatggcgctgataggac
agtccaactctgttaccgtggagatactagaccctgaggacgtcactagtgtttatccac
agttagagttcagggtggaggaggacgttggagaggttttgatccctgtcaggaggactg
gagatctcagtaacgaactcacggtcctctgttacacacaggaaggctcagccagaggaa
ctgttcccagcacagtgttgtcgtactctgactacatcgctcgtccggaggaccagcgca
gcgccctgcgtttcgaccgtggcgatgccgagagggcgtgtcgtgtactcgtcatcgacg
actcgctatacgagggggcggagacctttgccgtaaccctgggcgacgccatgggggggc
tggtgagggcggagcataacagtacacgcgtggtcatactgcctcatacacccgacgagc
ctgtggtgtacctggggaggtcagagtacttagtagatgagagttgtggttacctggagg
tttcagtgtggaggtctggtactgacctgtcccataatgcatcagtcacactacgctccc
gaccaacacagccggtcagtgctctggcggggttggactacgtgggcattggccagagtg
ttgacttcccaccgggcatcaccgtggtgactgtgaaggtggccatcttggatgacctgg
gtggtccggtgatggagggggaggagtctttccagctggttctgagcatgcccaataact
catcactaggacgacctagcctggctaccattactatcaatgacaccatgtctgacttac
ccagggtgcagttcggggaagtggagctgcgggtggacgaggccgacgggcgggcggttg
ccgtggtaacccgtgacggcgacctaggcctcacctccgttgtcagatgttacacgcgcc
agggttccgcccaggtgatgatggactatgaggagagaccagatacggatgcctccgtcg
tcaccttcaggccaggtgagcgtgagcagcaatgtatcgtgactctggttgacgacttag
agtttgaggaagaggaagagtttcgcctggtcctcggaatccccagtagccaatcagatc
tgggcttgtcgctgggtgaccagaaggagatagtcatcaggatcactgatagtagagaca
aatctgtgatcaggttctccgagcctcgatacacggtgagtgagccggttgcccacggcg
agataaccgtgctgagggttgccgtgcggcgccatggcgacgtctccagggtgtcggtag
tgcgtgtgcacactaaagatggctctgcccactctggacaagactacaaccctctgtcac
aggagctggtgttttctgagggccagacagagcatctggtagaggtagaggttctgtatg
acgacgagggagagatgagagagaccttcaccctacagctcacacctgaccaacatatgg
tggctgacacacaggtgaccaaggcgacagtgttcattgaggagaaggaggggggtgatg
tggggggcatcacgttccctgctgtacccctcgtggtgtccttactggtctatgatgacc
caactctcgcctcaaccccaaccagcccccacccccccaccgggtacccccttgtgtgtg
tgacggcctgtgacccccgctacccagactatagtcgtaccttgtctctctgcgtctccg
agggtatcaacaacaccctgacagagtaccgctggctcctggggtccccagggactcctg
atggtgtagctagcccaccgagggagctcgacgctgggaccttcctcacctctaccaggt
ccatgctgctggatgctgtttaccttcaggcaggggtcagggtgcagtgctctgcccgag
ctgtgagcactccgggacggggaggactggggctgactagccctcaggtggaggtcagca
tggaggagggtctgtgccctcctcatacccctggggcgattggggctgaaccgttctctg
ctaagatccgctacactggaccagacgacccacagcaccccaacctcatcaggctaaccg
tcactatgccacatgtagatggtatgctgcctttcatctccacccgtcccctttccaacc
tggcactaaccctgaaccacgacccctctcggttggggaaccaccgttgttccaacctcc
agggggggccaggcgatgccagcgctacccgtctggggctcacctcagctggggtggccg
tggccggcgtggtgggagggtctcacctccggaacacaggagcccagacggagctcctct
ccccttggtttctatcacagtccttggaacctgggaactgtgtctggagctctctggtta
ctgactacagcatcagcgactctgtccctgacgtggggggaaccgaaggaacggacgaac
caatcttctctggatactacagcatcagcgacctgctgtctgactgtggggggaccgtaa
ggacggacggacaggtcctgaatgcggtccagtcgtatgtgacgttacgtgtccctctat
tcgtctcctacgtgttccactccccgtcggcccctggcggctggctcacctttgacctcc
gatctgacctccgcatgaccttcacctatgttagtgatccagtcccagtagagttcagtc
tgaacacagtcctggtgttgttgtctaagagagaactgtggctgtctgatgggtccatgg
gattcggacaggatgacgacgtggctgctggtcatgagtggtacatccatgccgtctaca
cagtgcgctccagggaccacggcaaccgcaactacaacaaccataatcacgctgtcggca
agcggagtctgttcctgcagcaccacgtcatctccagcagggggcgccagaagagagcag
ctccagagaaagagagaggacaggaccaggacagggggaccaacctccgacacgtccacc
tgcagagagcgcccagcctcgggcagagctgggccgaaggtcccctgatggactgggagc
tccaggagaggggggaaggtccggtgggaagcccagaaagggagaccttggatggggcca
aggcatccgtgacactggcggtggtggtgctggtgcccccgtctacccccaggccccctt
ctaccctcccaggcccccttctaccctcccaggccccgtctaccctcccaggccccgtct
accctcccagcccccgtctaccctcccaggcccccttctaccctcccaggccccctttct
accctcccaggccccctttctaccctcccaggccccgtctacccccacaggccccgtcta
ccctcccaggccccatctaccctcccaggccccgtctacccttctaccctcccaggccct
gtctacccttctacctcccaggcccctgtctaccctcccaggcccccttctaccctccca
ggccccgtctacccttccagggccctttaccctcccagggccccgtctacctcccaggcc
cggtttctctacccgttctcccctcccatggcccccttcttaccctcccaggccccgtct
acccgttctaccctccccggccccgtctactcccatcccccttctaccctgccaggccgg
ctaccccccagccccgtctaccgttataccctccccaggcccccttcttaccctccccgg
ccccgtctacccctcccggccccccgtcttaccctccccggcccgttcttaccctcccag
gccccgtcttaccctcccaggccccgtctaccctcccaggccccgtctaccctcccaggc
cccgtctacccctcccagggggggcccccttctaccctcccagccccgtctacctcccag
gcccccttctaccctcccagccccccgtctaccctccatgcccccgtgtctaccctccca
ggccccgccgtctaccctcccaggcccccgtctaccttcccaggcccccttctaccctcc
caggccccgtctaccctcccaggcccccgtctaccctcccaggtccccgtctaccctccc
aggcccccgtctaccctcccagatga
DBGET
integrated database retrieval system
