Oncorhynchus nerka (sockeye salmon): 115133755
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Entry
115133755 CDS
T07952
Name
(RefSeq) homeobox protein SIX6-like isoform X1
KO
K19473
homeobox protein SIX3/6
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115133755
Transcription factors [BR:
one03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
115133755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
115133755
NCBI-ProteinID:
XP_029523100
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Position
LG8:complement(20948382..20952768)
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AA seq
266 aa
AA seq
DB search
MFPLPMFTPEQVARVCENLEETGDIERLGRFLWSLPDAVPGSAGEALNRHESVMRARALV
AFHGGNFEALYQILQSHRFTRESHAKLQDLWLDAHYREAERLRGRPLGPVEKYRIRKKFP
LPRTIWDGEQKTHCFKVRHQAERTRSLLREWYLQDPYPNPSRKRHLAQATGLTPTQVGNW
FKNRRQRDRAASAKNRLQQDPTHLPSGCSPEGSVQERHSHHPRLLTASPCHPGSPEASDC
STGTDPRGTGASTPDISVSSDSEFES
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgttccctttgcctatgttcaccccggaacaagtggctcgggtgtgcgagaacctcgag
gagaccggcgacatcgagcgcctggggcggttcttatggtccctgcctgatgctgtccct
ggctccgccggggaggctctcaaccgccacgagtcagtgatgcgcgcccgggcgctggtc
gccttccacggaggaaacttcgaggcgctttaccagatcctccagagccaccgctttaca
cgcgagtctcacgccaaactccaagatctgtggctggacgcgcattaccgcgaggcagag
cggctccggggccgtcccctgggaccggtggagaagtaccgtatccggaagaagttccca
ctgcctcgcaccatctgggacggcgagcagaagacgcactgctttaaggtgagacaccaa
gctgagagaactcgtagcctgctcagggagtggtacctccaggacccctacccaaacccg
tccaggaaacggcacctggcccaggccacgggactcacgcccacacaggtcggcaactgg
ttcaagaaccgacgccagagagacagggccgcgtcggcaaagaacagactgcaacaggac
cccacccacctgccttccggatgctcccctgagggttctgtccaggagcgccactcccac
cacccccgcctgctgactgcctccccctgtcacccgggcagccccgaggccagcgactgc
agcactggcaccgaccctcggggcaccggagcctccacccccgacatctccgtcagcagc
gacagcgagtttgaatcctga
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