Oncorhynchus nerka (sockeye salmon): 115133831
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Entry
115133831 CDS
T07952
Name
(RefSeq) LOW QUALITY PROTEIN: NHS-like protein 2
KO
K24144
Nance-Horan syndrome protein and NHS-like proteins
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
one04812
]
115133831
Cytoskeleton proteins [BR:
one04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
115133831
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHS
Motif
Other DBs
NCBI-GeneID:
115133831
NCBI-ProteinID:
XP_029523167
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All DBs
Position
LG8:complement(15911801..15964124)
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AA seq
1273 aa
AA seq
DB search
MEKLEVLRTRSANTNLDAESKRSAASSSTATSAHFRSPWQQSVNVFGSWSRPDCVQELHQ
EAQLNLQSLLQDFEEQLYDTKLTGQTFRHPTASSQSSDDTSTTLSRSPVSLNNKRPEFIF
LPASKGHVCEEDETSSVSISRGTDPSPSPSPSPCGSDRPLVGWSNTSLGPPVAEKPRWHL
GRRTPAHLLSLDITGEGKLLGVDLLQGSCSPSPSLGCGGGGQPRSLEPVTDTPVQHIPLR
KTHSDLDPSFSLPQSPRNPPPTLGTMDHSAALLCSNSPSQSWNGPKGSTFSPGAWNEAYS
YSLAPSPLGKGPATMPKGARMVEMVAGQGGELMCPSQTSLGLSVSSGSQSHSSSFTSISE
PSGHRHPGTIGMMMGRRSETEGAASSPTDERSGLERGMGGGERRERSARSVAAANAFKFR
ERSLSTPTDSGSFCSTDNICGGMYGLGGLPGAGNGTNGNGGGVLTEMRHPHHHYPGGEGG
ERGESYALFYPSGSSEDGSNSIDNVSVTDGNFPPGGRLRLRSRSISLKKSKRKPPPPVRS
VSLVKNLGDAEGRVHGHNGGHYRDGRPKSLHIPRDHLQDFQPDFLLPSSSLSKADLEEPE
LGHGGVDGPPSLEVHGPDTTELSFPAHWQLEEWKASDPYRSLSGSSTATGTTVIECMKVR
GSSESLLDSPSTSRATSPSLLSIEAESTKASSPFKPPGLMSPSSGYSSQSETPTPITPSN
QVVGTPTGPACTLGCKMRPKIPERKSSLPATSPRDPAARSRLSFEMPVNAHLDLSSIKPK
TKASRRHSDTSTATKPGKLSAGSQSTLPVVTTNELRNIRLRSISRTDLEDCLDGASNDII
EEEQGRDLSPPPVTPGCIPGPLVAPRPKPPVAFKPPLPKRPLNILLKSPSSSPVASDSPP
ASPVDPPRPMPNPSIYMVVGRKPKLKKAFPHTPTSPFRPQEHPQTFPLHYPQSLYDVSSF
PQTRSLYDLPPLPLPQPLLEDPSMEPEFNPDLEPVLGLRMEGHSPLPAVTRKCKKPKVGQ
LNGFLLRFQRSPNVLLLPSNGTTDRQGTQTDCPAALRSPVGAFPPEEIPGKEENQENYLG
IGTDEESSMESSLQDSSFTDVEGRLSITETGRSDDAESVEESSSVVSDKTELHITEEMDD
DVRGHTPTTHTTEDLFTKIHRSKRKVLGRKEPGDSFGSRQSLVSPVKHSTSGGDLRTLTL
GSTPRSTSRNDNFMALLQKKGSKSSTGGARVSAMELLKSTNPLARRVTEFSTSADGGGDM
TTGNNGTRMPQDQ
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atggagaagctggaagttttacggaccaggtcagccaacaccaacttggacgcagagtcg
aagcgtagtgcggcttcgtcgtcgacggcgacatcggcccacttccggtctccatggcaa
cagagcgtgaatgtgtttggctcgtggagcaggccggactgtgttcaggagctccatcag
gaggctcagcttaacctgcagagcctgctgcaagactttgaagagcagctgtatgacacc
aagctaacaggccagacgttccgccacccaacagcttcctcccagagttctgacgacacg
tccaccaccctcagtcgctcccctgtctccctcaacaacaagagacctgaattcatcttc
ctgccggcgtctaaggggcatgtgtgtgaggaggatgagacctcctcagtaagtatcagt
aggggtacagacccgtccccctctccttccccatccccctgtgggtcagatcgccctcta
gtggggtggagcaacacctccctgggaccccccgtggccgagaaacctcgttggcacctg
ggacgacgcacccccgctcacctgctatccctcgacatcacaggtgagggtaaactcttg
ggcgtagacctcctccagggatcctgttccccctctccgtccctgggctgtggtggagga
ggccagccccggtctctggagcctgtcacagacacccctgtccagcacatacccctgaga
aagacccacagtgacctggaccccagcttcagccttccccagtcccccaggaacccccct
cctaccctgggcaccatggaccactctgccgccctcctctgctccaactccccctctcag
tcctggaacggccccaagggctccaccttctccccgggagcctggaatgaggcctatagt
tatagtctagctccaagtccgctggggaagggaccggcgaccatgcccaagggagcaagg
atggtggagatggttgcggggcagggtggggagttgatgtgcccctctcagaccagtttg
ggactctccgtgagctcggggtcgcagtctcactctagttcgttcacgtcaatatcagaa
ccttccggacacaggcacccaggcaccatagggatgatgatgggaaggcggagcgagaca
gagggggcggcatctagccccactgacgaacggagtggcctggagagagggatgggagga
ggcgagagaagggagaggtcggcgcgttctgtcgccgccgccaatgcatttaagttccgt
gagcgttctctttccacgccgacggattccggctcattctgctccacggacaacatctgc
ggcgggatgtacggcctcggtggactacctggagccggtaatgggacaaacgggaacggt
ggcggcgttttaacagagatgcgccacccacaccaccattaccctggcggcgaggggggt
gagaggggcgagagctatgccctcttctaccccagcgggagctccgaggatgggagcaac
agcattgacaacgtctccgtaaccgacggcaacttccccccgggcggtcgcctacggtta
cgttctcgctccatctcgctgaagaagtccaaacgcaaaccccctccacccgtccggagc
gtctcgctcgtgaagaatttaggggacgccgaggggcgcgtgcatggccacaacggaggg
cactaccgggacggccgccccaaatccctgcacatcccccgggaccacctccaggacttc
cagccagacttcctcctaccctcctcctccctctccaaggccgatctggaggagcctgag
ctgggccacggcggcgtggacggaccccctagcctcgaggtccacggaccagacacaaca
gagctgtccttcccagcccactggcagctggaggagtggaaagcttctgacccctacagg
tcattgtctgggtctagtacagccacagggacgactgttatagagtgcatgaaggttcgg
ggcagctccgagtctctcctggactctccctccacctccagagccacctccccctccctg
ctctccattgaggcagagtcgaccaaagcttcctctcccttcaagccaccaggactcatg
tccccctccagcggctactctagccagtcagaaactccgacacccatcaccccctccaac
caggtggtaggaacaccaacagggcccgcctgcacattggggtgtaagatgcgccccaaa
atcccagagaggaagtcttcgttgccagctacatcaccacgggaccctgccgcccgatcg
aggctgtccttcgagatgccagttaacgctcatctggatttgtcctccatcaaaccaaaa
acaaaggccagccggcgccattctgatacgtccaccgccactaagcccggtaaactgagt
gctggcagccaatcaactctcccagtggtgaccacgaacgagctccggaacatccgcctg
cgttctatctcccgtactgacctggaggactgccttgatggagcctctaatgacatcatt
gaggaggagcagggtcgcgacctttccccccctcctgtcacccccggttgcatccccggc
cccctcgttgcccccagacccaaaccccctgtggccttcaagcccccattacccaaacgc
cccctcaacatcctcctcaagtccccttcctcctcccccgttgcttccgactccccccct
gcctcccctgttgaccctccccggcccatgcctaaccccagcatctacatggtggtaggt
aggaagcccaagctgaagaaagccttccctcacacccccaccagcccctttagaccccag
gaacatccccaaaccttccccctccactacccccagagcctctacgatgtttcctccttc
ccccaaacccggtccctgtacgatctgcctcctctccccctgccccagcccctcctggag
gacccctctatggagccggagttcaaccctgacttggagcccgtcttgggcctgaggatg
gagggtcactcccctctccctgcagtaaccaggaagtgcaagaaacccaaggtaggccag
ctgaatgggttcctcctccggttccaaagaagccccaacgtcctgcttcttccctccaac
ggtaccaccgacagacagggaacacagacagactgccctgccgccctccgctctcccgtt
ggagcgttcccaccagaagagattcccgggaaagaggaaaaccaggaaaattacctggga
atagggacggatgaggaaagctccatggagtcttcattacaggactcttcttttacagac
gtggaggggaggctcagcattacagagacaggcagaagtgatgatgcggagagtgttgag
gagagcagttcggtcgttagtgacaagacggaactccacatcacagaggaaatggatgat
gatgtcagaggacacacacctaccacacacaccacagaggacctgttcaccaaaatacac
aggtcaaaaaggaaagtcctgggccgtaaggaaccaggggactcgttcggcagccgccag
agtctggtctccccggtgaagcacagcaccagtggtggtgacctccgaaccctgaccctg
ggctcgaccccgcgctccacctcgcggaatgacaacttcatggccctgctccaaaagaag
ggcagcaagtccagcacgggaggggccagagtctctgctatggaactcctcaagagcaca
aaccccctcgcacgacgcgtcacagaattctccacctcggcggacggaggaggggatatg
accaccgggaataatggaaccagaatgcctcaggaccaatga
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