Oncorhynchus nerka (sockeye salmon): 115133924
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Entry
115133924 CDS
T07952
Name
(RefSeq) double-stranded RNA-specific editase 1-like
KO
K13194
double stranded RNA-specific editase B [EC:3.5.-.-]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
one03041
]
115133924
Spliceosome [BR:
one03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
115133924
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
115133924
NCBI-ProteinID:
XP_029523221
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All DBs
Position
LG2:complement(8337388..8361836)
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AA seq
773 aa
AA seq
DB search
MALFLDGSQAMGAAGAYYCLIRRRFKRRRKKRSERKGVISKAMTEGRAGVKQTRNQPRFF
TMEGDEEERMSSSSTDVKENRNLDNVGSSSKEGLGGEGAAHLPNGGSAGCGGGRKRPLEE
GNNGHHNNKYRPKKRKKMPGPILPKNALMQLNEIKPGLQYKLLSQTGPVHAPVFVMTVEV
NGQLFEGSGPTKKKAKLNSAEKALRSFVQFPNASEAHMAMGRTLTVNTDFTSDQADFPDM
LFNGFETPAPPEESFYLGSNGTNGSLGLVAYPLLGNSGATALSQSSLGLPPTSSVPAFVS
PAIAKNPVMILNELRPGLKYDFVSESGESHAKNFAMSVVVDTQTFQGSGRNKKLAKARAA
QAALSALFNMQLDQTPSRQPIPREGLQLHLPQVLADAVSGLVVDKFSELTDNFTSPHARR
KVLAGVVMTTGTDVKEAQVICVTTGTKCINGEYMSDRGLALNDCHAEIIARRSLLRYLYA
QLEHFLSNNREEQQKSMFTRCENKRGFRLKDNVQFHLYISTSPCGDARIFSPHEAAFEDQ
GDRHPNRKARGQLRTKIESGEGTIPVKVSNTIQTWDGVLQGERLLTMSCSDKIARWNVVG
IQGSLMCYFTEPIYFSSIILGSLYHADHLSRAMYQRIADIEDLPQTFNLNRPLLSGISNA
EARQPGKAPNFSVNWAVGDQGLEVINAMTGKDDLGRPSRLCKHALYSRWVRLYCKLSQTL
RIKGAKPSLYHDAKQAAMEYHAAKQTLTKEFHKAGLGAWVKKPIEQDQFSLQS
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atggctctgtttctggatggctcccaggccatgggggccgcgggggcctattactgcttg
atccggaggaggttcaagaggagacgcaagaaacgctccgagcgcaaaggtgtcatcagc
aaagcaatgacagaaggtcgagctggtgtgaagcagacccgtaaccagccaaggttcttc
accatggagggagatgaagaagagcgcatgagttccagcagcaccgacgttaaggaaaac
cgcaacctggacaacgtgggctcctcctccaaggaggggttggggggtgagggggcagct
cacctccctaatgggggcagtgcagggtgtggagggggcagaaagcgtcccttagaagag
ggtaataacgggcatcacaataacaagtacaggcccaagaagcgtaagaaaatgcccggg
cccattctgcccaaaaatgccctgatgcagctgaatgaaatcaagcctggactgcagtac
aagctgctgtctcagaccggtccggtccacgcgcccgtgttcgtcatgactgtcgaggtc
aatgggcagctgttcgagggctccggccccaccaagaagaaggctaagctcaactcggct
gagaaggctctgcggtcgttcgttcagttccccaacgcctccgaggcgcacatggcaatg
ggtcggacgctaacggtcaacacagactttacctccgaccaggctgacttcccagacatg
ttgtttaatgggtttgagaccccggcccctccggaggagtccttctacctgggttctaac
ggtaccaatggctccctgggactagtagcataccccctgctagggaactcaggtgctacc
gccctgagtcagtcctcgttaggcctaccacccacctcctccgtcccggccttcgtctcc
cccgctattgccaagaaccctgtcatgatcctcaacgaactacgacccgggctaaagtac
gactttgtgtcagagagtggagagagccacgccaagaactttgccatgtccgtggtggtg
gacacgcagacgttccaaggctcaggccgcaataagaagctggccaaggcccgtgcggcg
caggctgctctctctgccctctttaacatgcaactggaccagacaccgtccagacagccc
atacccagagagggcctgcaactgcacctgccacaggttctagctgatgctgtgtccggt
ctggtagttgacaagttcagtgagctgacggataacttcacatcccctcacgcacgacgg
aaagtcctagcaggcgttgtcatgacaacaggcaccgatgtcaaggaggcacaagtgatc
tgtgttaccacggggaccaagtgtataaacggcgagtatatgagtgaccgcgggctggct
ttgaacgactgccatgctgagatcattgctcgtcgttccctccttaggtacctgtacgca
cagctggaacacttcctcagtaacaacagagaggagcagcagaagtcgatgttcacgagg
tgcgagaacaagcggggcttccgtctgaaggacaacgtgcagttccacctgtacatcagc
acgtcgccctgcggagacgcacgcatcttctcaccccacgaggctgccttcgaggatcag
ggagacaggcaccctaacaggaaagctcgtggtcagctgaggaccaagatagagtctggg
gaggggaccatccctgtgaaagtcagtaacactatccagacctgggacggggtactgcag
ggagagcggctgctcaccatgtcctgcagtgacaagatcgccaggtggaacgtagtaggg
atccagggctctctgatgtgttacttcacagagcccatctacttctccagcattatcctg
ggaagcttgtaccacgcagaccatctctccagagccatgtaccagaggatcgctgacatt
gaggacctgcctcagacgttcaacctcaaccggccacttctgagcggaataagcaacgca
gaagcacggcaaccgggtaaagctcctaacttcagtgtgaactgggctgtgggagaccag
gggttagaggttatcaacgccatgacaggcaaggacgacttgggacggccctcgaggctc
tgcaagcacgccctctacagccgctgggtgcgcctatactgcaagctttcacagactctg
agaatcaaaggtgccaaacccagcttgtaccatgacgccaaacaggcagcgatggagtac
catgctgccaagcagactctgaccaaggaattccacaaggcaggactgggagcctgggtc
aagaagcctatcgaacaggaccagttctcactccagtcctga
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