Oncorhynchus nerka (sockeye salmon): 115133925
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Entry
115133925 CDS
T07952
Name
(RefSeq) LOW QUALITY PROTEIN: probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial
KO
K15791
2-oxoadipate dehydrogenase E1 component [EC:1.2.4.-]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00310
Lysine degradation
one00380
Tryptophan metabolism
one00785
Lipoic acid metabolism
one01100
Metabolic pathways
one01210
2-Oxocarboxylic acid metabolism
Module
one_M00032
Lysine degradation, lysine => saccharopine => acetoacetyl-CoA
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
115133925
00380 Tryptophan metabolism
115133925
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
115133925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
one03029
]
115133925
Mitochondrial biogenesis [BR:
one03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
115133925
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Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
Lebercilin
Motif
Other DBs
NCBI-GeneID:
115133925
NCBI-ProteinID:
XP_029523218
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All DBs
Position
LG9a:complement(920394..956085)
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AA seq
929 aa
AA seq
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MSAILFLKNLHRVSRVPLSVARPVVGCLYHTRKGVYGHRPKQSQGDTTLHSDPVSYITAL
NRDHGLARLVEAYRAHGHKAAKINPLLPNDPVEDSVPEINMLTGAVQGPLNTSGLRHFGK
AEASVEEVIGYLEESYCGRISIETSQLTSLEEREWLADRFEQLKKEMFTAEERIKLAKLM
LESQEFDHFLASKFSTVKRYGGEGAESMMGVFYEMFRLSAHSGVTDIVMGMPHRGRLNLL
TGLLQFPPELMFRKMRGLSEFPADSPSIGDVLSHLTSSVELDFGAAHPLHVTMLPNPSHL
EAINPVTQGKTRARQQLKQEGDYSPDENAQPGDKVVCLQVHGDASFSGQGIVPETFTISL
LPHFRVGGSIHLIVNNQVGYTTPSARGRSSLYCSDVGKMVGCAVIHVNGDDADEVVRATR
LAVEYQRLFRKDVILDLLCYRQWGHNELDEPSFTNPAMYKIIRSRKSTPDSYADQLISEG
LMTEEERVAIRTAHYGMLNDKLSNMNFYSPPPMNLQGRWGGLEEPQARVTHWDTGVPAPL
LQYVGAKSVEILEGVQLHSHLGKMHVAGRLAKVENGTYLDWSTAEAMAFGSLLCQGFNIR
ISGQDVGRGTFSQRHAMIVCQDTNDMYIPLNHIDPEQKGFMEVCNSALSEEAVLGFEYGM
AIAQPKLLPIWEAQFGDFFNGAQIIFDTFISGGEAKWLLQCGMVILLPHGYDGAGPEHSS
CRIERFLQLCDSKEEGVDGDNVNMGVVNPTTPAQYFHLLRRQMIRNFRKPLIVAGPKTLL
RFSGATSSLVDMAPGTYFKPVIGDPSVTPASVQRVVLCSGKHYYALLKQRETAAATQTTA
LIRLEELCPFPLEALQQELNKYTNAKEFVWSQEEPQNMGPWSFVAPRFEKQLACKLRLVS
RPALPAPAVGIGALHQQQNEAVLTATFSS
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcgatactattcctgaaaaacttgcaccgcgtcagcagagtacctctcagtgtc
gctcgaccggtcgtcggatgtctgtatcatacacggaaaggagtctacggtcaccgaccc
aaacaaagccagggggacacgacgttgcacagtgacccagtctcgtatatcactgcactc
aatcgagaccacgggctagcacgcctggtggaggcttaccgagcacatggacacaaggct
gctaaaattaaccctctactgcctaatgacccagtggaggacagtgtgccagagatcaac
atgttgactggagctgtacaaggacccctgaacacatcaggactgcggcattttggtaaa
gctgaggcgtcggtggaggaggtgattggctacctggaggagtcctactgtggccgcatt
tccatagagaccagtcagctgaccagcctggaggaaagggagtggctcgcagaccgcttc
gagcagctgaagaaagagatgtttactgcggaggagaggataaagttggccaagctcatg
ctggagtcacaggagtttgatcactttctagcctccaagttctccacggtgaagcgttat
ggcggtgagggagcagagagcatgatgggagtgttctacgagatgttccgtctgtctgcc
cacagcggggtgacggacatcgtcatggggatgcctcaccgcgggagacttaacctcctc
acggggcttctgcagttcccaccagagctgatgttccgtaaaatgcgtggcctcagtgag
ttcccagcagactctccctctatcggcgacgtcctctcccacctcacctcctctgtagag
ctggactttggtgctgcccaccccctccatgtgaccatgctgcccaacccctcccacctg
gaggccatcaacccagtcacccaggggaagacccgtgcccgccagcaactcaaacaggag
ggagactactccccagacgagaacgctcagcctggtgataaagttgtctgtctccaggtc
catggggatgcctcattctcgggtcaaggaattgttccggagacattcaccatttcacta
ctcccccacttcagagtcggtgggagcatccacctcattgtaaacaaccaagtgggctat
accactccgtctgcgagagggagatcatctttgtactgtagcgatgttggtaagatggtg
ggctgtgcggtgatccatgtgaacggtgatgatgcggatgaggtggtgcgagccacgagg
ctggcggtggagtaccagagactctttaggaaggatgttatcctggacctgctctgctac
agacagtggggacacaacgagctggacgaaccctccttcactaaccctgccatgtacaag
atcatccgctccaggaaaagcaccccagactcttacgctgaccagctgatctcagagggc
ctgatgacagaggaggagcgtgttgctatcaggacagcccactacggcatgctgaacgac
aagctgtctaacatgaacttctacagccctccacccatgaacctgcaggggcgctgggga
ggtctggaggagccccaggccagggtcactcactgggacaccggggtgcctgctcccctg
ctgcagtacgtaggggccaaatctgtggagatcctcgaaggagtccagctacacagtcac
ttggggaagatgcacgtggcgggtcgccttgcgaaggtggagaatggaacttatctggac
tggtccactgctgaggccatggcgtttggctctctgctctgccaagggttcaacattcgc
atcagtggacaggacgttgggagaggcaccttcagtcagagacatgccatgatagtttgt
caggacacaaatgatatgtacatccccctaaaccacatagaccctgaacagaaaggattc
atggaggtgtgtaacagtgctctgtctgaggaggccgtgctgggctttgagtacggcatg
gccatcgcccagcctaaactcctgcccatctgggaggctcagtttggtgacttcttcaac
ggagctcagatcatcttcgacaccttcatctccggaggtgaggctaagtggctgctgcag
tgtgggatggtgatcctgctgccccatggttatgacggagccggacctgaacactcctca
tgccgtatagagaggttcctacagctgtgtgacagtaaagaggagggggtggatggtgac
aatgtcaacatgggcgttgtcaaccctacgactccagcccagtatttccacctgctgaga
cgacaaatgatacgcaacttccgcaagccgctcatcgtggccgggcccaagactctgctc
cgattctctggagcaacatccagtctggttgacatggctcctggtacatatttcaagcct
gtgattggtgacccctcagtcacaccagcaagtgtccagcgggtggtgttgtgctcagga
aagcactactatgccctgttgaagcagagggaaacggcagctgccactcagaccacagca
ctgatccgactggaggagctgtgtccctttcctctggaggccctgcagcaggagctgaac
aagtacaccaatgctaaagagttcgtgtggagtcaggaggagccccagaacatgggcccc
tggtcgtttgtggcccccaggtttgagaagcagctggcctgcaagcttcgattggtcagt
cggcctgctctgcccgccccggctgtgggcatcggagcgctccaccagcagcagaacgag
gccgtcctcaccgccaccttctcctcctga
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