KEGG   Oncorhynchus nerka (sockeye salmon): 115134006
Entry
115134006         CDS       T07952                                 
Name
(RefSeq) laminin subunit beta-1-like
  KO
K05636  laminin, beta 1
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one04510  Focal adhesion
one04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:one00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    115134006
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    115134006
SSDB
Motif
Pfam: EGF_laminin LAMININ_IV_B Laminin_N EGF_LMN_ATRN LAMB1 ATG17_like F5_F8_type_C
Other DBs
NCBI-GeneID: 115134006
NCBI-ProteinID: XP_029523365
LinkDB
Position
LG9a:complement(5500750..5532454)
AA seq 1785 aa
MLIIQIATLLSAGACVLAQVPEFSDVCTEGSCYPATGDLLIGRAHQLSSNSTCGLHRPEP
FCIVSHLQEEKKCFVCDSTDVYVKSVVNATTGHRVENVVTTFAPNRLKTWWQSENGLEKV
TIQLNLEAEFHFTHLIMTFKTFRPAAMVIERSADFGKNWQVYRYFAYDCESAFPAISSGP
MQKVDDVICDSHYSDIEPSTEGEVIFRVLDPVFRIEDPYSPRIQNMLKITNLRVKFTKLH
TLGDNLLDSRMEIKEKYYYAVYDLVVRGNCFCYGHASECAPVDGAGDVVEGMVHGHCMCN
HNTMGLNCEKCQDFYHDLPWRPAEGRNTNACKKCNCNQHSDSCHFDMAVYVSTGNVSGGV
CNECQHNTMGHNCEQCKPFYFQHPERDIRHPSICEPCNCDPVGSLNGGICDRMTDVLSGL
IAGQCRCKPNVEGEQCDQCKQAHYGLGDHLLGCMACTCNALGTVPGGSPCDTDSGVCYCK
RLVTGRDCDQCMPQHWGLSNDMDGCRPCDCDLGGAINNDCSQETGQCVCREHMFGRRCDQ
VESGFYFIALDHYTYEAEDAKFGPGVTVVQRPHPQDRSPTWTGIGFVNVPEGAYLEFSID
NIPHSMEYDILIRYEPQLPDQWEEVLMTVMRPSVISADSRCANTMPDDDNQMISLHPGSR
YAVLPRPVCFEAGMNYTVRLSLPLYSALSDVQSPYTLIDSIVLMPHCKNLEIFTGSEGGD
LATSSAWNTFQRYRCLENSQSVVKTPSTDICRNFIFSVSALLHQGAKACQCDPQGSLSTV
CDASGGQCQCRPNVVGRNCDKCSPATYLFGPSGCRSCDCNPQGSEHVFCHEATGQCACIH
GVYGRQCDHCLPGHWGFPNCRPCTCNGHTEQCDPYSGECLGCREQTTGHKCERCLEGYYG
DPVLGSGDHCRPCMCPDGPGSGRQFAGGCYHGLDSHYQVFCICNPGYRGARCEECAPGYY
GNPHENGGQCQPCQCNNNIDMLDQESCDARTGECLKCLYHTEGRGCHSCKLGYYGDALTQ
NCRKCVCNHLGTNPATCPAVGDCHCDLGSGQCQCLPNVVGQHCDQCAPDTWNMASKRGCE
SCDCDPNHSFGTSCNELSGQCSCKPGFGGKMCQECRELFWGDPEVKCNACDCDPQGIAEQ
QCNKANGHCVCLEGVSGPRCNLCARGSSGTFPYCERCHQCFADWDVIVGQLTNQTHRLVN
KVNTIKASGITGPYKHAIDNMEQSARSIRTILAQNLATQPLSEIQQLLEQATDLMEEMSN
KLNLTEEALAQVSSDDNSTNTKLDSLKEDAQKLDRTVKELLEQVELIKNSDVRGATDSVT
KYYQQSLAAGAQANASTTDPGNPVESSFVLRQATEDKMNDTRDEFHRRQEEHSKRLDDLA
DQLETLDLSELSEKTCGSPAGEACADSPCGGLSCVDSEGNRRCGGEGCNGLVTLANNAWH
KAKDFDQEILMAMEEVDKLSKMVSEAKVKADEAKLSAQDVLLKTNETKQRVDQSNEELRS
LIRQIRDFLTQDAADMESIEAVANEVLAMQMPSTPAQLQNLTDEIRERVRDLAQVETILN
QSADDVQRAENLLKQAGRASKEATDVRETAEMVKQALEEAERAQKAAAEAIKQATTDIKG
TNDLLSSVESETADSEFKLNNATQRLLWLEKDITLLREKAQNTSLSSEQTERDAESINKV
AEQVKKDLESELKDKYSTVQDLIKQEAGGVADAKKRAELLQQEATDLLLQASDKLQLLKD
LEKSYEDNQKTLEDKANQLVDLEKAVKELLQEISHKVTVYSTCLF
NT seq 5358 nt   +upstreamnt  +downstreamnt
atgttgataattcaaattgcgaccctgctatccgcaggggcgtgcgtccttgcccaggta
ccggagttcagcgatgtgtgcacagaggggagctgctaccccgccacgggagaccttctc
atcggcagagcccaccaactctcctccaactccacatgcggcctccaccggcccgagccg
ttctgtatcgtcagtcatttacaggaagagaagaaatgctttgtgtgtgactccaccgac
gtctatgtcaaaagcgtagttaacgccaccaccggccaccgggtggagaatgttgtgacc
acattcgcccccaaccgcctgaaaacctggtggcagtcagagaatggtcttgagaaagtg
accatccagctgaacttggaggcagagtttcatttcacccacctcatcatgaccttcaag
accttccggcctgctgccatggtgattgagcggtcggccgactttgggaagaactggcag
gtgtaccgctacttcgcctacgactgtgagtcagcattccctgccatatcctcggggccc
atgcagaaagtggatgacgtcatctgcgattcacattactccgacatcgaaccatcgaca
gagggagaggtcatcttccgagttttggatccagttttccgtattgaagatccctacagc
cccagaatccaaaacatgttgaagatcaccaacctaagggtgaagttcaccaagctgcac
acactgggagacaacctgttggactcccgcatggagatcaaggagaagtactactacgct
gtctacgacttggtggtacggggtaactgcttctgctacggacatgcctccgagtgcgcg
cccgtcgatggggctggggatgttgttgagggaatggtccatggccactgtatgtgcaac
cacaacaccatggggctgaactgtgagaagtgtcaggacttctaccatgacctgccctgg
agaccagccgagggacgcaataccaacgcctgtaaaaaatgtaactgtaaccagcactca
gactcgtgtcacttcgacatggcagtatacgtatccacgggtaacgtgagcggtggtgtg
tgtaatgagtgccagcacaacactatgggacacaactgtgaacagtgcaaacccttctac
ttccagcacccagagagggacatccgtcaccccagtatctgtgaaccgtgtaactgtgat
ccggtgggctctctgaacggtgggatctgtgacaggatgactgatgtgttgtctggactg
atcgctggccagtgtcgctgcaagcccaatgtggagggagagcaatgtgaccagtgcaaa
caggcccattacggcttgggagaccaccttctgggctgcatggcctgcacctgtaatgcc
ctggggacagttcctggagggagcccatgtgatacagactcaggagtctgttactgcaaa
cgcctggtcaccgggagggactgtgaccaatgtatgcctcagcactgggggctaagcaat
gacatggatggctgcagaccatgtgactgtgacctgggtggagccatcaataacgattgt
tcccaggagactggtcagtgtgtgtgtcgagaacacatgtttggccggcgctgtgaccag
gtggagtcaggcttctacttcatcgccctggaccactacacctacgaggcagaggacgcc
aaatttggacctggtgtgacagtagtgcagagaccccaccctcaggaccgtagccccacc
tggacagggataggtttcgtcaatgttccagagggggcctacctggagttctccatcgac
aacatcccccactccatggagtacgacatcctcatccgctacgagcctcagttaccagac
cagtgggaggaggtgttgatgacggtgatgcggcccagtgtgatttcagctgacagtcgc
tgtgccaacaccatgcctgacgacgacaaccagatgatatccctccaccccggatcacga
tatgcagtgctccccagaccagtgtgtttcgaggcagggatgaactacactgttcgtctg
agtctgcccctctactccgcactcagtgacgtccagtccccatatacactcatcgactcg
attgtgctgatgccccactgtaagaacctggagatcttcactggctctgagggcggtgac
ttggccaccagcagtgcctggaataccttccagcgctaccgctgtctggagaacagtcag
agcgtagtgaagaccccgtccacagacatctgccgcaactttatcttcagcgtatctgct
ctgctgcaccagggagctaaagcatgccagtgtgacccgcagggctctctcagcacggtg
tgtgatgccagcggcgggcaatgccagtgtcgccccaatgtagtaggcaggaactgtgac
aaatgttcccctgccacctacctgtttggacccagtggctgcagatcctgtgattgcaat
ccccagggatcggagcatgtattctgccatgaggctactggccagtgtgcttgtatccac
ggggtgtacggccgtcagtgtgaccactgtttgccgggacactggggcttccccaactgt
cgcccctgcacctgcaatggccacaccgagcagtgtgacccctactctggagaatgcctg
ggctgccgagaacagaccaccgggcacaagtgtgagaggtgtctggaaggttactatggc
gaccctgtcctgggttcaggggaccactgtcgtccctgcatgtgtccggacgggccaggt
agtgggcggcagtttgccggtggatgttaccacggtctggactctcactaccaggtgttt
tgtatctgcaaccctggatacagaggtgccagatgtgaggagtgtgccccaggttactat
ggaaatccccatgagaacggcgggcagtgccaaccatgccagtgcaacaacaacattgac
atgctggaccaggagtcctgtgatgccaggacgggtgaatgtctcaaatgtctctaccac
accgagggtcgaggctgccacagctgcaagctgggttactatggagatgccctcacacaa
aattgcagaaagtgtgtgtgtaaccacctgggtaccaacccagccacgtgcccggcggtg
ggcgactgccactgtgatctgggcagcgggcagtgccagtgtctaccaaatgtggtgggt
cagcactgtgatcagtgtgcccccgacacctggaacatggccagcaagaggggctgcgaa
tcttgcgactgtgaccccaaccactcatttggaacgtcctgcaacgagctgagtggccag
tgctcctgtaaacctggctttgggggtaaaatgtgtcaggagtgcagagagctgttctgg
ggagaccctgaagtcaaatgcaatgcatgcgactgtgacccacaaggcattgccgagcag
cagtgcaacaaggccaacggtcactgtgtgtgcttggagggcgtgtctggtccccgctgt
aatctctgcgcccggggctcctctggcaccttcccctactgcgaacgctgccaccagtgc
ttcgccgactgggatgtgatcgtaggtcagctgaccaaccagacccacaggctggtcaac
aaggtgaacaccatcaaggccagcggcatcaccggaccatacaaacacgccatagataac
atggagcagagcgccaggtccataagaactatcctggcccagaacctggctacacagcca
ctgtcagagatacagcagctactggagcaagccacagatctaatggaagagatgagcaac
aagctaaacctcactgaggaggcgttggcccaagtatcatctgatgacaacagcaccaac
accaaactggactctctcaaagaggacgcccagaaactggatcgcaccgtcaaggagctg
ctggagcaagtggagctcatcaagaactctgatgttcggggagcgacagacagtgtcaca
aagtactaccagcagtctctggctgctggggcccaggccaacgcctccaccaccgaccca
ggcaacccggtggagagctctttcgttctacgacaagctacggaggacaagatgaacgac
accagggacgagttccataggaggcaggaagaacactccaagagactggacgacctggcg
gatcagctggagacattggatctatcagaactcagcgagaagacgtgcggcagcccagct
ggtgaggcgtgtgcagactctccgtgcgggggtctgagttgtgtggactctgaggggaac
aggaggtgtgggggtgaggggtgtaacggtctggtcaccctggccaacaatgcctggcat
aaggccaaggactttgaccaggaaatcctcatggccatggaggaggtggacaagctctcc
aagatggtgtcagaggccaaggtgaaggcagacgaggccaagctgagtgcccaggacgtg
ctgctgaagacaaacgagaccaagcagcgcgtggaccagagcaatgaggagctgcgcagc
ctcatccgacagatcagagacttcctcacacaggatgcagcagacatggagagcatcgag
gcagtggccaacgaggtgctggccatgcagatgcccagcacgccagcccagctccagaat
ctgacagacgagatcagggagagggtgcgagacctggcccaagtggagactatcctcaac
cagagtgctgacgatgtgcagagagccgagaacctactgaagcaggcaggcagagctagt
aaagaggccacagatgtgagggaaacagcagagatggtgaagcaggctctggaagaggct
gagcgtgcccagaaagcagcagccgaggccatcaaacaggctaccactgacattaaaggc
acaaatgacctcctgtcctcagtggagtcggagacagcagactcagaattcaagctgaac
aacgccacccagaggctactgtggttagagaaagacatcacactgctcagagagaaggca
cagaacacctcacttagctctgaacaaaccgagagagatgcagagagcatcaacaaagtg
gctgagcaggtcaaaaaggacctggagtcggagctgaaggataagtacagcaccgtgcag
gacctgatcaaacaggaggccgggggtgtggccgacgccaagaagagggcggagcttcta
cagcaggaagccacagaccttctgctacaggccagtgacaaattacagctactgaaagat
ttagagaagtcctacgaggacaaccagaagactctggaagacaaggccaaccagttggtg
gatctggagaaggctgtgaaagagctgctgcaggagatcagtcacaaagtcactgtgtac
agcacctgtctgttttaa

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