Oncorhynchus nerka (sockeye salmon): 115134016
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Entry
115134016 CDS
T07952
Name
(RefSeq) paired box protein Pax-6-like isoform X1
KO
K08031
paired box protein 6
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115134016
Transcription factors [BR:
one03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
115134016
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Homeodomain
Homeobox_KN
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
115134016
NCBI-ProteinID:
XP_029523380
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Position
LG9a:complement(6183530..6204687)
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AA seq
467 aa
AA seq
DB search
MPQKEYYNRATWESGVASMMQNKVYDYNEGHSGVNQLGGVFVNGRPLPDTTRQKIVELAH
SGARPCDISRILQTHGDAKVQVLDNENVSNGCVSKILGRYYETGSIRPRAIGGSKPRVAT
PEVVGKIAVYKRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSLSVSSINRVLRNLASEKQ
QMGADGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPNPDGCPQSDGGGENTNSISSNGE
DSDETQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQ
VWFSNRRAKWRREEKLRNQRRQASNSSSHIPISSSFSTSVYQPIPQTTAPGWMSFSSGSM
LGRPDTALTNTYSALPPMPSFTMANNLPMQAPVSSQTSYSCMLPTSPSVNGRSYDTYTPP
HMQAHMNSQSMAGSGGNSTGLISPGVSVPVQVPGSDADMSQYWPRLQ
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaaaaagaatactataaccgggccacgtgggaatctggcgtcgcgtccatgatg
caaaacaaggtgtatgactataacgaaggtcacagcggagtgaatcagcttggcggagtg
ttcgtcaacggcagacccctgcccgacaccaccagacagaaaatagtcgagcttgctcac
agtggcgcgcggccgtgcgatatatccaggattctgcagacccatggtgatgcaaaagtt
caagtgctggacaatgaaaacgtgtcaaacggctgtgtgagtaagattctgggcagatac
tatgaaaccggctccatcagaccaagggcgatcgggggtagcaaaccaagagtagcaact
cccgaggtggtcggaaaaattgcagtatacaagagggagtgcccgtcaatcttcgcgtgg
gaaattcgtgacagactgctatccgagggggtctgcacaaacgataatatacccagtgta
agttcattgagtgtttcgtcgataaacagagtactgcgcaacctggctagcgaaaagcaa
cagatgggcgcagatggcatgtatgataagttgagaatgctgaacggtcagactgggacg
tgggggacccgcccgggctggtaccccggaacctcagtgccaggacagcccaacccagat
ggttgtccacagtcagacggtggaggtgagaacactaactcaataagttcgaatggagaa
gactcggatgagacccaaatgagacttcagctgaaaagaaaattgcagaggaaccgcact
tcgttcacacaagaacagatagaagcgcttgagaaagagtttgaaagaactcactatcca
gatgttttcgcaagggaaagacttgctgcaaaaattgacctcccagaggccagaatacag
gtgtggttttcaaatagaagggcaaagtggaggagggaggagaaactacggaatcaaaga
cgacaagccagtaactcttccagtcacatccctatcagcagcagtttcagcaccagtgtc
taccagcccatcccacagaccacagcaccaggttggatgtcgttctcatcaggatccatg
ttgggaagaccagacacagcccttacaaacacatacagtgccctgccacctatgccaagc
ttcaccatggccaacaacctgcctatgcaagcccctgtgtccagccagacctcctattcc
tgcatgctgcccaccagtccctcagtcaacggacggagctacgacacgtacacccctcct
catatgcaggcacatatgaacagccaatcaatggctggttcaggaggcaactcaacaggt
ctcatctctcctggagtatctgttcctgttcaagtcccaggcagtgatgcagacatgtcc
cagtactggcccaggctacagtaa
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