Oncorhynchus nerka (sockeye salmon): 115134029
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Entry
115134029 CDS
T07952
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X1
KO
K02296
aryl hydrocarbon receptor nuclear translocator-like protein 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115134029
Transcription factors [BR:
one03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
115134029
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Paralog
GFIT
Motif
Pfam:
PAS_11
PAS
PAS_3
HLH
PAS_9
Per3-like_PAS-A
PAS_4
bHLH_IRO3
bHLH_INO2
PAS_2
bHLH_NCOA
bHLH_NPAS4
PAS_8
Motif
Other DBs
NCBI-GeneID:
115134029
NCBI-ProteinID:
XP_029523423
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Position
LG9a:7000004..7043242
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AA seq
632 aa
AA seq
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MNICDDLMADQRMDITSTMNEFMSPSATELISSSINTQGMDYTRKRKGSTSDYQIDGFSF
DESSMDTDKDKLRDCGDHQGRIKNAREAHSQIEKRRRDKMNSFIDELAALVPTCNAMSRK
LDKLTVLRMAVQHMKTLRGAANPYTEANYKPSFLSDDELKHLILRAADGFLFVVGCDRGK
ILFVSESVYKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPV
KTDITPGPSRLCSGARRSFFCRMKCNRPYVKTEDKDFPSTCSKKKADRKSFCTIHSTGYL
KSWPPNKMGLDDDNEPDNEGCNLSCLVAIGRLHPHIIPQPSHEDIRVKPTEYVSRHAIDG
KFVFVDQRATAILAYLPQELLGTSFYEYFHQDDIGHLAERHRQVLQMREKINTNCYKFKI
KDGSFIMLRSCWFSFMNPWTKEVEYIVSTNTVVSCSMLDAADPYPQSAASPTASMDSVLT
SEGGGRRAIQTVPGIPGGTRAGAGKIGRMIAEEVMEIQRTRGSTPSSCGSSPLNISTPPP
DCSPGCKRIQNGGTPDLPSAGTLPGGPDSIGYPYSNQSIMSDNSHLSIDIMDEPGSSSPS
NDEAAMAVIMSLLEADAGLGGPVDFSDLPWPL
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgaacatttgtgatgatctaatggcagaccaaagaatggacattacctctacgatgaat
gagttcatgtcccccagcgccaccgagctgatcagcagctccatcaacacccaaggcatg
gactacacccgcaagaggaagggcagcacctccgactaccaaattgatggattttctttt
gacgagagcagtatggatacagacaaggataagcttagggattgtggtgatcatcagggg
cggatcaaaaatgccagggaggcacacagtcagattgagaagagacgcagagacaagatg
aacagctttatagacgagctggcggcgttagtgcctacttgcaatgctatgtcccgcaag
ctggacaaactcacagttctacgcatggctgttcagcatatgaagacattacgaggcgca
gcgaacccatacacagaggcgaactacaagccgtctttcctgtccgatgatgaattgaag
cacttaatattgagggctgctgatggctttctgtttgtcgtcggatgcgatcgtgggaag
atcctcttcgtctctgagtctgtttacaagatcctcaactatagccagaacgacctaatt
ggccagagtctgtttgattacctgcatcctaaagacatcgccaaagtcaaggagcaactg
tcgtcatcggatacagcaccccgggagcgactcatcgacgccaaaactggcctgccagtg
aagactgacattacccctgggccgtctaggctgtgctccggagccagacgttctttcttc
tgccggatgaaatgtaaccggccctacgtcaaaacggaggacaaggacttcccctccacc
tgctcaaaaaagaaagccgaccgcaagagcttctgcacgatccacagtactggctacctg
aagagctggccacccaacaagatgggtttggacgatgacaacgagcccgacaacgagggc
tgtaacctcagctgcctggtggccatcggccggctgcacccccacatcatcccccagccc
tcccatgaggacatccgcgtcaaacccaccgaatacgtctcccgccacgccatcgatggg
aagttcgtctttgttgaccagagggctacagccattcttgcgtacttaccccaggagctt
ctaggcacctccttctacgagtattttcatcaggatgatattggccacctggcagaacgt
cacagacaagtgttgcaaatgagagaaaagatcaacacaaactgttacaagttcaagatt
aaagacggctccttcatcatgctgagaagctgctggtttagtttcatgaatccctggaca
aaagaggtggagtacattgtctccacaaacacagtggtctcatgcagtatgctagacgct
gcagacccctatcctcagtctgctgcttcccccacagcctctatggacagtgtgctgacg
tcagaaggtggagggagacgggctattcagacggtgccaggcatccctggcggaacacgg
gcaggtgccggcaagatcggccgtatgatcgcagaggaggtgatggagattcagaggacc
agaggctcaacaccctctagctgtggctccagccccctgaacatcagcaccccccctcca
gactgctctccagggtgcaagaggattcaaaatggtgggacaccagaccttccgtcggca
ggaacgctaccaggaggacctgactccattggatacccatactccaaccagtccattatg
agtgacaactctcatctcagcattgacatcatggacgagccaggctccagcagccccagt
aacgatgaggcagccatggctgtgatcatgagtctcctggaggctgacgcaggccttggg
ggccccgtggactttagtgacttaccctggcccttatga
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