Oncorhynchus nerka (sockeye salmon): 115134040
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Entry
115134040 CDS
T07952
Name
(RefSeq) transcription factor E2F4-like
KO
K04682
transcription factor E2F4/5
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04110
Cell cycle
one04218
Cellular senescence
one04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
115134040
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
115134040
04218 Cellular senescence
115134040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115134040
Transcription factors [BR:
one03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, E2F
115134040
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Ortholog
Paralog
GFIT
Motif
Pfam:
E2F_CC-MB
WHD_E2F_TDP
HTH_Cmi2_C
Motif
Other DBs
NCBI-GeneID:
115134040
NCBI-ProteinID:
XP_029523446
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Position
LG9a:complement(7428620..7437215)
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AA seq
399 aa
AA seq
DB search
MELESERTEFGAMGDSLQPQTPSRHEKSLGLLTTKFVSLLQEAKDGVLDLKAAADTLAVR
QKRRIYDITNVLEGIGLIEKKSKNSIQWKGVGPGCNTQEIADKLIDLKAELDDLDKREHE
LDQQRVWVQQSIMNVTDDSQNSPMAYVKHEDLCSAFKGDTLLAIRAPTGTQLEVPIPESV
LIGQKKYQIRLKSSAGPIEVLLVNKDPSSPSPVVLSVPPPEDMLQSLPVPAAAAAANTKQ
TPTAPSQPSQPLAHSSNPSPATLLPACTATSNQAVTTAVSSTPTVSTPTTNTNAQSTPLL
DTQPLQSSASLDGCCSSSAVFEPIKADPSELLYFPKELSDMFDPTKEIMSADLLEELMSS
EVFSPLLRLSPPPGDHDYIYNLDETEGLCDLFDVPILNL
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggagctggagtcggaaagaaccgaatttggagctatgggagactcgcttcaaccccaa
accccaagtcgacacgagaagagtctaggattgcttacaaccaaatttgtatctttgcta
caagaggccaaggatggagttctagacctgaaagcagcagcagacaccctagctgtaaga
cagaagcggcgcatctacgacatcaccaatgtgcttgagggcatcggactgatcgagaag
aagtctaagaacagtattcagtggaagggtgttggtcctggctgtaacacacaggagata
gccgataaactcattgatctgaaggcagaactggatgatctggacaagcgggagcacgag
ttggatcagcagagggtctgggtccagcagagcatcatgaacgtcacagacgactcacag
aacagccctatggcttatgtaaaacatgaagacctctgtagtgctttcaaaggtgacact
ctcctagcgatccgcgctcccacaggcacacaactggaggtgcccatacctgagtcggta
ctgattggacagaagaagtatcagatccgtctcaagagctcagcaggacccattgaggtt
ctccttgtgaacaaggacccatccagcccgtctccagtggtgctgtccgtccccccaccc
gaggacatgctccagagccttccagtgcctgctgctgctgctgctgccaacacaaaacag
acacctactgccccctcacagcccagccagcctctggcccactcctccaaccccagtcct
gccacactcttacctgcctgcacagctacttcgaatcaggcagtcaccactgcagtgtcc
agcacaccgactgtttccacacccactacaaacacaaatgcccaatcgactcccctgttg
gacacccagcctctccagtcctctgcctcattggatggctgctgttcttcttcagcagtc
tttgaaccaatcaaggctgacccctcagaattgctgtatttccccaaagaactttctgac
atgtttgacccgactaaagagatcatgagtgcagacctgttggaggagttgatgtcttcc
gaggtgttctctccactacttcgtctatctccccctccgggtgaccacgactacatatat
aacctggacgaaaccgaaggcctgtgtgacctctttgatgttccgattcttaacctttga
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