Oncorhynchus nerka (sockeye salmon): 115134106
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Entry
115134106 CDS
T07952
Name
(RefSeq) liprin-beta-1-like isoform X1
KO
K27096
liprin-beta
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115134106
Membrane trafficking [BR:
one04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
115134106
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
SAM_PNT
DUF16
Motif
Other DBs
NCBI-GeneID:
115134106
NCBI-ProteinID:
XP_029523611
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All DBs
Position
LG9a:complement(11482598..11536677)
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AA seq
1016 aa
AA seq
DB search
MMSDASDMLAAALEQMDGIIAGSKAMDYSNGLFDCQSPTSPFMGSLRALNLLEDLRGVLE
LLDTEEREGLRCQIPDATADSLVDWLQQGHLMSNGHHISMGGDLYQERLSRLEGDKESLV
LQVSVLTDQVEAQGEKIRDLDMCLDEHREKLNATEDMLQQELLCRTALETQKQDLMAEVS
NLKLNSFEKDRLHFDFSDNEDMVLEMNELRYRVTEMESERLQYEKKLKSTKSLMAKLSSL
KIKVGQMQYEKQRKENKLQALKEELAMLRRHLEGRDGELRRLHDETGFRGITPVGMDSGD
RVSHPDETLKLRLKEKHVEVQRMKKAVESLMAANEEKDHKIEELRQSLLRYKKVQDRSSM
QGKKEKTQDCESDESNSDSSLSVMSMTTTLVAMESERHALAGDEEVAGKSPDELEMHYGA
AEVSSPTPSPSVQSACDPKRGPELDQPEPESKAGGQEESQEAPLSCDTPQTLDSPNSGSR
DNLYVSNSEKNKAVEEISKISERPPKSPSSSHPVTTEDDRFGNKKARSSFGRGFFKVKGG
KRTASTPNLAETEREEGTDHLDLAGLPQRSANSDSTNTLTSVTSTTSPECKKKSKGIKGL
FGKLRRSQSTTFNLDDNLSEAVEFKRGGVRATAGPRLGWSRDLQRLPKNDLDTPFARWSK
EQVCDWLQEQGLGLYLNMARVWISSGQTLLQGSQQDLERELGIKHPLHRKKLQLALQALG
SEEDDNKGKLDYNWVTRWLDDIGLPQYKTQFDEGRVDGRMLHYMTVNDLLSLKVGSVLHH
LSIKRAIQVLRLNNYEPNCLRRRPSDENNITPAEISQWTNHRVMEWLRSVDLAEYAPNLR
GSGVHGGLMVLEPRFNVETMALLLNIPPNKTLLRRHLATHFNLLVGSEAQGLKQDCLENP
DYTLLTATAKVKPRKMSFGSFGSLRKKRQDDNEEYVCPMDVEMPKGRSFQKGYELQLYED
DIDRLEQMEDSEGTVRQIGAFSEGIQNLTSMLKDDEFFKEISNSPNPSITDDDSNM
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctgatgccagtgacatgttggcagcagccttggagcagatggatgggataata
gcaggctccaaggctatggattactctaacgggctgtttgactgccagtcgcccacctct
cccttcatgggcagcctgcgggcgctgaacctgctggaggacctccggggcgtgctggag
ctattggacacagaggagagggagggcctgcgctgccagatccctgacgccaccgcagac
agcctggtggactggctgcagcagggacacctgatgtccaatggtcaccacatctccatg
ggtggggacctctaccaggagagactgtctcggctggagggtgacaaggaatccctggtg
cttcaggtgagtgtgttgacagaccaggtagaggcgcagggggagaagataagggacttg
gacatgtgtctggatgagcaccgggagaaactgaacgccactgaggatatgctgcaacag
gaactcctgtgcagaacggctctagagactcagaaacaggacctgatggccgaggtgtcc
aacctgaagctgaactcatttgaaaaggacagactgcactttgacttcagcgacaatgag
gacatggttctggagatgaatgaactgaggtacagagtgactgagatggagagtgaaaga
ctacagtatgagaagaaactgaaatccactaagtcattaatggccaagctttctagcctg
aaaatcaaagtgggccagatgcagtatgagaaacagaggaaggaaaacaaactgcaggcc
ctgaaggaggagctggcaatgctgaggaggcatctggagggaagggacggagagctgagg
aggttacacgacgagactgggttcagaggcatcacaccggttggaatggacagtggagac
agagtctctcacccagatgaaactcttaaattgaggctgaaagagaaacatgtggaagtg
cagagaatgaaaaaagcagtggaatcactgatggcagccaatgaggagaaggatcataaa
attgaggagttgaggcagtcgctgctgcgctacaagaaggtccaggacaggagttcaatg
caagggaagaaagagaaaacccaagactgcgagagtgacgagagtaacagcgacagctcc
ctctccgtgatgtcaatgacaaccaccctggttgccatggagtcggagaggcacgctcta
gccggagacgaggaagtagcagggaaaagcccagacgagctggagatgcactatggagct
gctgaagtgtcttcgcccacacccagcccttcagtccagtcagcatgcgatccaaaaagg
gggccagagctggaccaacctgaaccagagagcaaggcagggggccaggaagagtcacag
gaggcccccctttcatgtgatactccacagaccctagatagccccaattcagggagtcgg
gacaacttgtatgtcagcaacagcgaaaagaataaggctgtggaggagatcagtaagatc
agcgagcgcccgcccaagtctccctcttcgtctcaccccgtgaccacggaggatgaccgc
ttcggtaacaagaaggctcgctcctcctttggccggggcttcttcaaggtcaagggaggc
aagaggactgccagcacccctaacctggctgagacagagcgagaggagggcactgaccat
ctggacctggccggtctaccccagaggtcagccaacagcgacagcaccaacacactgacc
agtgtgacctccactacatcccctgagtgcaagaagaagtccaagggaatcaaggggctc
tttggaaagctgaggagaagtcagtccaccacattcaacctggatgacaacctatcagag
gcggtcgagttcaagagaggcggagtccgagccacagcaggtcccagactgggctggtcc
cgtgacctacagcgattacccaagaatgacctggacaccccgtttgcccgctggtccaag
gagcaggtgtgtgactggctgcaggagcagggactggggctctacctgaacatggcccgc
gtgtggatctcttctggacagactctgctgcagggctcacagcaggacctagagagggag
ctgggcattaaacacccgctgcacaggaagaagctccaactggccctgcaggccctgggc
tctgaggaggatgacaacaagggcaaactggactacaactgggttaccaggtggctggat
gacattggcctgcctcagtataagacccagtttgatgaggggagggtggacggccgcatg
ctacactacatgacagtaaatgacctgctatctctgaaggtgggcagtgtgctccaccac
ctcagcatcaagagagccattcaggtgctgcgcctcaacaactacgagcccaactgcctg
cgccgacggccctctgacgagaacaacatcacgccagcagagatctcccagtggaccaat
cacagagtgatggaatggctgagatcagtggacctggcggagtatgcccccaacctgagg
ggcagcggcgtgcacgggggactcatggtgctggagccacggttcaacgtggagactatg
gccctgctgctgaacattccccccaacaagaccctgctgcggaggcatctggccacccac
ttcaacctgctggtgggctctgaggcccaggggctcaaacaggattgtctggagaatccc
gactacaccctgctcaccgccaccgccaaggtcaagccgaggaagatgtcgttcgggagc
ttcggcagcctgaggaagaagaggcaggatgacaatgaggagtatgtctgccccatggac
gtggagatgccaaagggacgtagcttccagaaaggctatgagcttcagctctacgaggac
gacattgaccggctagagcagatggaggactcagagggaactgtgaggcagatcggagct
ttctccgagggcatccaaaacttgacgagcatgctgaaagacgatgaatttttcaaggag
atctccaactcgcccaaccccagcataacagatgacgattccaacatgtga
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