Oncorhynchus nerka (sockeye salmon): 115134118
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Entry
115134118 CDS
T07952
Name
(RefSeq) class E basic helix-loop-helix protein 41-like isoform X1
KO
K03730
class B basic helix-loop-helix protein 3
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115134118
Transcription factors [BR:
one03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
115134118
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GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_NPAS4
DCX2_DCDC1
Motif
Other DBs
NCBI-GeneID:
115134118
NCBI-ProteinID:
XP_029523637
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Position
LG9a:12029710..12043049
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AA seq
433 aa
AA seq
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MDEKISRLQDRQFMDHADFLGVEYSSLYMCKSKRGLKREDGKDAYKLPHRLIEKKRRDRI
NECIGQLKDLLPEHLKLTTLGHLEKAVVLELTLKHLNALTAVTEQQHQEILAFQNGDLSM
KVPIRADLDAFHSGFQACAKEVLQYLNKLENWNACEQRCAQLISHLHKVSAQFQPGTPLL
HPQLPARDALDRDGQKPDSQAGHDRVSVIQRSHGELNENDTDTDSGYGGEAEKNDGKKGC
DRSKLQGPKAVKIKQEFEDDRAAKKTKMNWAGNCTTSADMTTRPDLVFMNSLMGITGVGQ
QTPFCMPFYFINPSAAASYIPLFDKSNLEKFVYPAAAAATISSQFHWLYPSLNSHASAAA
AATAGGFSRMSTEKISGFGSDSKDSPSDDSDMSNVAEPGSPDEREDNLENDEDDDYDDKE
LGDESPDNENDST
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaaaaatctcgcgtctgcaggacagacaatttatggatcatgctgatttctta
ggggtggaatactcctcactctacatgtgtaaatcgaaaagagggctgaagcgcgaagat
ggcaaggacgcgtacaaattaccacaccgattgatagagaagaagaggagagacagaatc
aatgagtgtatcggacagttaaaggatttgttacccgaacatctcaaactgacaacgctc
gggcatttggagaaagcagttgttcttgagttaactttgaagcatttaaacgctttgact
gctgtcactgagcagcagcaccaggagattctggcttttcagaatggggatctatcgatg
aaagtgcccattcgcgctgatttggatgcgttccactcggggttccaagcgtgtgccaaa
gaggtcctgcagtacctaaacaagttggagaactggaatgcatgtgagcagcggtgcgcg
caactaatcagccacttgcacaaagtctccgcgcagtttcagcctggtacgccactgctc
catccccagctacctgccagagacgcgctcgaccgcgatggccaaaaaccagacagccaa
gccggacatgaccgcgtatcagtcatacagaggagccatggagagcttaacgagaatgac
acagacacagacagtggatacgggggtgaggcggaaaagaatgatgggaagaaaggatgt
gaccggagcaaactgcaggggcccaaggcagtaaagataaagcaggagttcgaggatgac
cgcgctgccaaaaaaacaaagatgaactgggctggaaactgcacgacaagcgcagacatg
accaccagacctgatctggtctttatgaattcgttgatgggaataactggcgtgggacag
cagactcccttttgcatgcccttttacttcataaacccctcggcggcagcgtcctacata
cctctatttgacaaaagtaacctagagaagtttgtgtacccagctgcggcagcggccacg
atctcatctcagtttcactggttataccccagcctcaactcacatgcgtcggcagctgcg
gccgcaacagccggtggtttttcccgcatgtcgacagagaagatctctggattcggttcc
gattccaaggactctccctccgacgacagtgacatgtcaaacgtggcggagccgggctca
cctgatgagagggaggacaatcttgagaacgatgaagatgatgattatgatgataaggaa
ttaggggatgagtccccagacaatgaaaatgacagtacataa
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