Oncorhynchus nerka (sockeye salmon): 115134124
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Entry
115134124 CDS
T07952
Symbol
fanci
Name
(RefSeq) Fanconi anemia group I protein isoform X1
KO
K10895
fanconi anemia group I protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
115134124 (fanci)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
one03400
]
115134124 (fanci)
DNA repair and recombination proteins [BR:
one03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
115134124 (fanci)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FANCI_S4
FANCI_HD2
FANCI_S1
FANCI_S3
FANCI_S2
FANCI_HD1
FANCI_S1-cap
YGL041W_C
MIF
Motif
Other DBs
NCBI-GeneID:
115134124
NCBI-ProteinID:
XP_029523646
LinkDB
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Position
LG9a:12862480..12893010
Genome browser
AA seq
1333 aa
AA seq
DB search
MRADIMEKIVSLSDGERIPELQQYLSSLTDDQLTTVVTNSALKGKDIGAMVKSIFKGSPP
SAPEGASRRLLLYQHCIPLCESGDLQTEVASDIIGLLMLETHNLPGPSLAQLASLFVDAI
KLGKMGSGKSLELFPTVLTALAATEALSYGKGELSGEEYKKQLINSLCSSRWDPQCVIHL
TTMFRDVPLAPEELQFLVEKVLRMFLKLDLQEIPPLVYQLLLLAAKGCKKQVLEGIISYF
KEQDLRQKEEQKDGESMDVEVQSIPQDQLRHVEGTAILHIVFTVRLDQELGREFLKSVKG
SQGELCPFSIALLLSVARIQRYEEQLFDFLKGAITKSFKDEHLQQGSKFLQDLLPQRCSL
AQMILDTVKNSVFGWDHVTQGLVQLGFILMDAFGPKAGPFGKTATEGANATAKTPTQQAC
RLGGHILLEGFKMHEPIRGEILEQVLNRLVTKTASPVTHFIDLLSDIVVSAPMILLESSS
KVTETFDHLSYLPLATVQGLLKAVQPLLKVSMSMKDALILVLRKAMFSSQLDGRKSAVTG
FLLLLKNFRVLGSMASSQASQAISSSQVQVDVHSRYNSAANEAFCLEILSSLRRCLGQQA
DVRLMLYEGFHDVLRRNSQLASSIMQTLLSQVRRYYEPEQDLLPPVKLELCIGAQGDQVF
LQEPLAHLLSCTVHCLLWYQGMRRSARPNAGGSDDDDDDDEEEGGFQDELQSILESITRR
MIKCELEDFELDKSAEFSLSSVGVKNSIYAVLVMGVYEVLIEYNFTKANYSKSLFEELLE
LISRYNKLSEILKEKSGKGKSSKSPRSLLSMGFVSTLLTALFRDSAQSREEALFVLRSSG
DFLRYAVSVALQKITQLEETGHTDGPDGQNTDKTFHHLCDITSVLMWRYTNIPCAVEDAG
KKEKRCSVSLLCLEGLLRIFSTGQQRYPARVAQLLSAIDLSVEEGSDHGPGNASVTEKTA
FYIRQFQRALFTQLNGGEEDFNSKEAQLLVNILSVLSRQLEPSSQQFVQMITWTVKICKE
TSFEDIAFSKGLLSLLFSLHVLYKSPVSLLWELCQDIHSQLGDIDQDLEVEKQSHFAIVN
MKTASPTTLLVLSQVGKVLDEVDWLITKKKGQLVPDRLSSGDATQAAGQQDPVEKALTLQ
LGTLLTALNELVQTALPSGVCTNTLLGELSRTYTILTTLVKYYIQLCSGQQGLLPARVEK
LVKLSGSHLTPQCYSFITYVQSGELAGGGADDKKKKKKEGEATATASAKLLRETKAIPNL
IYSIEQYEKYLITLSKKSKVNLMQYMKLSTSRDFRINAATLEAALQEHDNSQQTIASQEP
EQSQEPKKKRKKQ
NT seq
4002 nt
NT seq
+upstream
nt +downstream
nt
atgagagctgacataatggaaaagatcgtttcgttgtctgatggagagcgcatccctgag
ctgcagcagtacctctcatccctgactgatgaccagctgaccactgtggtcacaaacagt
gcattgaaggggaaggacattggagccatggtcaaatccatattcaaaggctctccgccc
agtgccccagagggagcgagtcgcaggctgctcctgtaccagcactgcatccccctgtgt
gagtctggagatctccagacagaggtggcatcagacatcattggactgctgatgctagag
acccacaacctgcccggcccctccctggcacagctggcgtctctcttcgttgatgccatt
aagttgggtaagatgggcagtggcaaatccctggagctcttccccacagtcctcactgcc
ctggctgccactgaggctctatcctatggcaaaggtgagctcagtggggaagagtacaag
aagcagctcatcaacagcctctgttccagcagatgggacccacagtgtgtgatccacttg
accactatgttcagggatgtgcccttggcaccagaggagctgcagttcctggtcgagaag
gtcctgaggatgttcctcaaactagacctgcaggagatcccacctttggtctaccagctg
ctgctgctggctgctaagggctgtaagaaacaggtcctggaaggaatcatcagctacttt
aaagagcaagatcttcgccagaaagaggaacagaaagatggagagagtatggacgtggag
gttcagtccattcctcaggaccagctgaggcatgtggagggcacagccatcctgcacata
gtttttacagtgcggcttgaccaggagctagggagggagttcctgaaaagcgttaagggg
tcccaaggggagctctgtccgttcagcattgctctgctgctctcggtggccaggattcaa
cgctacgaggagcagttgtttgattttttgaagggggcgatcactaagagcttcaaggat
gagcatctgcagcagggctccaagttcctgcaggacctgctgcctcagcgctgcagcctt
gctcagatgatcctggacactgtcaagaacagtgtgtttggctgggaccatgtgacccag
gggctggtccaactgggcttcatccttatggacgcctttggccccaaggcaggaccgttc
gggaagactgcaaccgaaggggccaacgccacagccaaaacacccacacagcaggcctgt
cggctggggggacacatcctcttggagggcttcaagatgcatgagccaatcaggggtgag
attctggagcaagtcctgaaccgattggtcaccaaaacggcctcccctgtcactcatttc
atagatcttctctcggacattgtggtctcggctcccatgatccttctggagtcatcatcc
aaggtgacagagacgtttgatcacctgtcatacctgccactggccactgtgcaggggcta
ctcaaggctgtccagcctctgctgaaggtcagtatgtccatgaaggatgctctaattctc
gttctgaggaaggccatgttctccagccagttggatgggaggaagtctgcggtgacgggc
ttcctgctgctgctgaagaacttccgggtcctgggtagcatggcttccagccaagccagc
caggccatctcctccagccaggtccaggtggacgttcactcccgctacaactctgctgcc
aacgaggccttctgcctggagatcctcagcagcctgcgccgatgtctgggccagcaggcc
gatgtacgactcatgctctacgagggtttccatgatgtcctccgccgcaactctcaacta
gcaagctccatcatgcagaccctgctctcgcaggtgaggcggtactatgagccagagcag
gaccttctgcccccagtgaagctggagttatgcatcggtgctcaaggagaccaagtcttc
ctccaggagcctctggcccatctgttgagttgcacagtccactgcctgctgtggtaccag
ggcatgcgccgttcagcccggcccaacgcaggtgggagtgacgatgatgatgatgatgat
gaagaggaagggggatttcaggacgagctgcagagcatcctggagagcatcacgcgtcgg
atgatcaagtgtgaattggaggactttgagctggataagtcggctgaattctccctgtcc
agtgtgggggtgaagaacagcatatatgccgtgctggtgatgggagtgtacgaggtgctc
atcgaatacaacttcaccaaggccaactacagtaagagtctttttgaggaactcctggag
ctgattagtcgctataacaagctgtctgagatcctgaaggagaagtctggaaagggcaag
agcagcaagagccctcgaagcctgctgtctatgggctttgtgtcaacactgctcactgca
ctcttcagagacagcgctcagagcagagaggaggctctgtttgtgctgcgatctagtggg
gacttcctgcgttacgctgtgagcgtggctctgcaaaagattacacagttggaggaaact
ggacacactgacggcccagacggacagaacacagacaagaccttccaccacctctgtgac
atcacgagtgtcttgatgtggcggtacaccaacatcccgtgtgcagtggaggatgctgga
aagaaggagaagcgttgcagtgtgtccctgctgtgtctggagggcttgctgaggatcttc
agcaccgggcagcagcgctacccagccagggtggcccagctcctttctgccatcgatctc
tctgtggaggaagggagtgatcacggtccagggaatgccagcgtcacagagaagactgct
ttctacattcgccagttccagagggcactgtttacccagctgaatggaggggaggaagac
ttcaacagcaaggaggctcagctcctggtaaacatcctgagtgtgctctcacgccagcta
gaaccctcctcccagcagtttgttcaaatgatcacatggacagtgaaaatctgcaaggag
accagctttgaggacatagcgttcagtaaaggcctgctctccctgctcttcagtctgcac
gtgctctacaagagtcccgtcagtctgttgtgggagctttgtcaagacatacacagtcag
ctgggagacatcgaccaggatttggaagtggagaagcagtctcactttgccatcgtcaac
atgaagaccgcctcgccgacaacactcctggtgctgtctcaggtggggaaagtattggat
gaggtggactggctgatcaccaagaagaaaggccagttggtccctgacaggctcagctct
ggtgatgccacccaggctgcgggccagcaggacccagtggagaaggcgctgacgctgcag
ctggggactctcctgacggccctgaacgagctggtccagaccgccctgccatctggagtc
tgcaccaacacactgctgggagagctgagccgtacatacaccatcctcaccactctggtc
aaatattatatccaactgtgctcaggccaacagggcctgctcccagcacgtgtggagaag
ctggtcaaactgtccggctctcacctgactccacagtgctactccttcatcacctacgtg
cagagtggtgagctggccggtggaggtgcagatgataaaaagaagaagaaaaaggagggg
gaggccactgctacagcatcagccaaactcctacgtgagaccaaggccattcccaacctg
atctacagtatagaacagtatgagaaatacctcatcaccctctccaagaaatcaaaggtg
aacctgatgcagtacatgaaactgagcacgtccagagatttccgcatcaacgcagccact
ctggaggcagcgctgcaggagcacgacaacagtcagcaaaccatagcctcccaggagcca
gagcagagccaggagcccaagaagaagagaaagaagcagtaa
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