Oncorhynchus nerka (sockeye salmon): 115134154
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Entry
115134154 CDS
T07952
Symbol
lrrc4c
Name
(RefSeq) leucine-rich repeat-containing protein 4C
KO
K07523
netrin-G1 ligand
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
115134154 (lrrc4c)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
one04515
]
115134154 (lrrc4c)
Cell adhesion molecules [BR:
one04515
]
Immunoglobulin superfamily
NGL family
115134154 (lrrc4c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
V-set
LRR_14
Ig_2
LRR_9
LRRNT
DUF7617
Sp38
FlK
Ig_6
DUF4293
Syndecan
CMV_1a
Motif
Other DBs
NCBI-GeneID:
115134154
NCBI-ProteinID:
XP_029523699
LinkDB
All DBs
Position
LG9a:complement(14655539..14751502)
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AA seq
645 aa
AA seq
DB search
MLNKMTSSWQQQTMRGPRWNRVLSDPLFVLLLALQLLAVAGLVRAQTCPSVCSCSNQFSK
VICTRRGLRDVPDGISTNTRYLNLQENLIQVIKVDSFKHLRHLEILQLSKNHIRNIEIGA
FNGLASLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLSYISEGAFEGLSNLRYLNLGMCNLKEIPNLIPLVKLDELEMSGNQLTVIRPGSF
KGLIHLQKLWMMHAQIQTIERNSFDDLQSLVELNLAHNNLTLLPHDLFTPLHHLERVHLH
HNPWNCNCDILWLSWWLKEMVPANTSCCARCSSPASHKGRYIGELDQNYFHCYAPVIVEP
PADLNVTEGMAAELKCRASSLTSVSWITPNGSIMTHGAYKIRISVLNDGTLNFTNVTMQD
TGTYTCMVSNSAGNTTASATLNVSSTENVLSYFTTVTVETIEPVHDEGRTTVGHNVGPTP
SAGSWETVSSTSTTTTTARTPLSTRVTEKTFTIPVTDLNGGSMTGLDEVMKTTKIIIGCF
VAITLMAAVMLIIFYKMRKQHHQQNHHAPQRTIEIINVDEDCVTGGPAMEGHLTLPPLEH
EHLNHYNTYKTAYNHVSTINSIHSSAHEPLLIRASSKDNVQETQI
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaaaatgacctcttcttggcagcagcagacgatgagaggtcctaggtggaac
cgggtcctgtccgaccctttgttcgtgctgcttctggccctccagctcctggcggtggcg
ggcctggtgcgcgcgcagacctgcccatccgtctgctcctgcagcaaccagttcagcaag
gtgatctgcacccggcggggactacgtgatgtcccagacggcatctccaccaacacacga
tatctgaaccttcaggagaacctcatccaggtgatcaaggtggacagcttcaagcacctg
cggcacctggagatcctccagctcagcaagaaccacatccgcaacattgagattggggct
ttcaacggcctggctagtctcaacaccctggagctgttcgacaaccgcctcaccaccatc
cccaacggggcctttgagtacctctccaaactcaaggagctgtggctgaggaacaaccca
atcgagagcattccatcgtatgcgttcaacagggtgccctcactacggaggctggactta
ggggaactgaaacgcctctcgtatatctcagagggagctttcgagggactcagcaacctg
cgctacttgaacctgggcatgtgcaatctcaaggagattcccaacctcatacccctggtc
aagctggacgagctagagatgtcagggaaccagctgacggtcatcagacccggctccttc
aaagggctgatccacctacagaagctgtggatgatgcacgcccagatccagaccattgag
aggaactcctttgatgacctgcagtcgcttgtggagctcaacctggcccacaacaacctc
actctgctgccccatgatctcttcacccccctgcaccacctggagagagtccacctccac
cacaacccctggaactgcaactgtgacatcctgtggctcagctggtggctcaaagagatg
gtgccggccaacaccagctgctgcgcccgctgcagttccccagcaagccacaaggggcgc
tacatcggtgagctggatcagaactatttccattgttatgcaccggttatcgtagagcct
ccggctgacctgaacgtgacagagggcatggcagcggagctgaagtgcagggccagttct
ctgacctcagtcagttggattacacccaatggctccattatgacccacggtgcatacaag
atccgcatttccgtgcttaacgatggcactctcaacttcaccaacgtcaccatgcaggac
acgggcacctacacctgcatggtgagcaactcagccggcaataccacagcatctgccacg
ctcaacgtgtcatccacagagaacgtcctcagctactttaccacagtgacagtggagacc
atagagccagtgcatgacgaggggcgcaccacagttgggcataatgtgggccctaccccc
tcagccggctcctgggagaccgtctcatccacctctaccaccaccaccacggcgcggaca
cccctctccacccgggtcacagagaagacctttaccatccccgtcacagacctaaacggt
ggctcaatgaccggcctggacgaggtgatgaagaccaccaagatcatcataggctgcttt
gtggccatcaccctcatggccgctgtcatgctcatcatcttctacaagatgagaaagcag
caccaccagcagaatcaccatgcaccccagcgcaccatcgagatcatcaacgtggacgag
gactgtgtgacgggcgggccggccatggagggccacctgactcttcccccgctcgagcat
gagcacctcaaccattacaacacctataagactgcgtacaaccacgtctccaccatcaac
tccatacacagctcggcgcacgaacctttgttaatccgggccagctcgaaagacaatgta
caagagacccagatctaa
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integrated database retrieval system
