Oncorhynchus nerka (sockeye salmon): 115134172
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Entry
115134172 CDS
T07952
Name
(RefSeq) ELKS/Rab6-interacting/CAST family member 1-like isoform X1
KO
K16072
ELKS/RAB6-interacting/CAST family member 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
115134172
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115134172
Membrane trafficking [BR:
one04131
]
Exocytosis
Others
Others
115134172
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
115134172
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cast
RBD-FIP
Rod_CreS
CCDC39
DUF5798
Motif
Other DBs
NCBI-GeneID:
115134172
NCBI-ProteinID:
XP_029523737
LinkDB
All DBs
Position
LG9a:complement(16630103..16678128)
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AA seq
1113 aa
AA seq
DB search
MYGSSRSVGRADANLSGGRDGGSSQGSGRSPHLPRSPRMGHRRTNSTGGSGGGPGGAGGK
TLSMENIQSLNAAYATSGPMYLSDNEVAMSDHVNKSGREMTTMGRQRVTYGSRASAGGGG
GVAASTPNIATSAQANAVLPGGMMAGDALAFGDHHMASTVPHSLRQARDNTILDLQAQLK
EVLRENELLRREVEVKESKLSSSMNSIKTFWSPELKKERALRKDEVSKITVWKEQYRVVQ
DETQHLHMTVQALQDELRIQRDLNQLLQQDPASQGRDLALTSEPTEENYRRLHGDHERQA
KELFLLRKTLEEMELRIDTQKQTLGARDESIKKLLEMLQSKGPSAKSSEEDQERTRRLAD
AEMHRHHLESLLDQRDRETTALREELHRRYEGTPESTKTKALQTVIDMKDAKINSLERGL
RDMEEEVIMLKSNGLLSCEERQEEMKQMEVYRSHTKFMKNKMDQVKQDLSRKDTELLGLQ
TKLETLTNQFSDSKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKETTLNKKSKQIQ
EMSEEKGTLNGEIHDLKDMLEVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQT
DTSNTDTALTTLEESLAEKERIIERLKEQRDRDDREKTEEIDSNKKELKDLKEKVSLLQG
DLSDRETNLLDLKEHASSLASSGLKKDSKLKTMEISLEQRKEACLKLENQLKRAQNATLE
AKANTELSERITSLEREVTRHREDSGKAQAEVDRLLEILREMENEKNDKDRKINELESQS
SRQTKDQSKKVASLKQKEHVEKSRNAQLVDEAKKREDNISESSQQVKDSLRLKTERIEEL
EEALRESVQITAEKEMVLAQEEAARNHQEKQIEELLGAMEKVKQELESMRAKLSSTQQSL
CEKEAHLTTLRAERRKHLEEVLEMKQEALLAAISEKDANIALLELSSSKKKKTQDEVALL
KREKDRLVQQLKQQTQNRMKLMADNYGDDHLKTAPDQTNHKPSPDQMIPPLLSLSENRSK
LKLYIDHLTDLCHDRDPSILSDLTPPAHYHHANPAAWEEELHKLTLEQLELELELCEKES
GELQEYANSVLQQIADYCPDILEQVVNALEESC
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atgtacggcagctcccgttccgtgggcagagcggatgccaacctcagcggagggagagat
ggggggagcagccagggttcgggtcgctcccctcatctcccccgttccccacggatgggc
caccgtcgcaccaacagcacggggggcagtggagggggtccaggtggagcgggaggtaag
accctctccatggagaacatccagtccctcaatgccgcctatgccacctcaggacccatg
tacctgagcgacaacgaggttgccatgtccgaccacgttaacaagagtggtcgagagatg
accacaatgggtcgacagagggtgacctacgggtcaagagcaagcgcaggagggggtgga
ggggtggcagctagcactcccaacatcgccacatctgcccaggccaacgctgtgctccct
gggggaatgatggcaggtgacgccctggcttttggggatcaccacatggcctccacggtc
cctcactccctgagacaggcccgggacaacaccatactggacctgcaggcccaactcaaa
gaggttctgcgtgaaaacgagttgctgcgtcgtgaggtggaggttaaggagagcaagctg
agttcctccatgaactccatcaagactttctggagccctgagctgaagaaggagagagcc
ctaaggaaggacgaggtgtccaagatcactgtctggaaggaacagtaccgcgtggtgcag
gatgagacccagcacctccatatgacggtccaggccttgcaggatgaactgaggatacag
agagacctgaaccagctgcttcagcaggaccctgccagccaaggtcgtgacctggccctg
acctctgaacccacggaggagaactaccgtcggctgcacggggaccacgagcgtcaggcc
aaggagctgttcctgctcagaaagaccctggaggagatggagctgaggatagacacccag
aaacagaccctgggcgccagggatgagtccatcaagaaactactggagatgctgcaaagc
aaagggccgtcggctaagtcgtcagaggaagaccaggagagaaccaggagactggctgat
gctgagatgcacagacaccatctagagtccctactggaccagagagacagggagacgact
gctctacgagaggagctgcaccgtcgatacgagggaaccccagagtccacaaaaaccaag
gctctacagactgtcatcgacatgaaggatgctaagatcaactctctggagcgaggtctg
agggacatggaggaggaggtgattatgttgaagtccaatggcctgctgagctgtgaggag
agacaagaggagatgaaacagatggaagtctaccgcagccacaccaagtttatgaagaac
aagatggaccaggtgaagcaggacttgtccaggaaggacacagagttgctgggtttgcag
accaagctggagactttgaccaaccagttctctgatagcaagcagcacatcgaggtcctc
aaggagtcgctgaccgctaaagaacaacgagctgccatcctacagacagaggtggatgct
ttgcgtctgcgtctggaggagaaggagaccacactgaacaagaagagtaaacagatccag
gagatgtctgaggagaagggcacgctcaacggagagatccacgacctcaaggacatgctg
gaggtcaaggagcgcaaggtcaatgtcctgcagaagaagattgagaacctgcaggagcag
ctgagagacaaggagaagcagatgagcagcctgaaggagagagtcaagtctctacagaca
gacacctctaacacagacactgctctcaccacactggaggagtcccttgctgagaaggag
cgtatcatagagcgtctgaaggagcagagagacagagacgacagggagaagactgaggag
atcgacagcaacaagaaagaactgaaggatctgaaggagaaagtcagtctgctgcaggga
gatctgtctgacagagagactaacctgttggacctgaaggagcatgcgtcgtctctggct
tcctcagggctgaaaaaagactccaagctgaagactatggagatctctctggagcagagg
aaggaggcgtgtctcaaactggagaaccagctcaagagggcccagaatgcgacgttggag
gccaaagcgaacacagagctgtcggagcgcatcacctccctggagagggaagttacccga
caccgagaggattctgggaaggctcaggcggaggtggaccgactgctggagatcctgaga
gagatggagaatgagaagaatgacaaggaccgcaagatcaatgagctggaaagtcagtcc
tccagacagaccaaggaccagagtaagaaggtggcatcactgaaacaaaaggagcatgtg
gaaaagagtaggaacgcccaacttgtggacgaagccaaaaagagagaggacaatatctca
gagagctctcaacaggtcaaggactctctacggttgaagacggaacgtatcgaggagtta
gaggaggctctgcgagagagtgttcagatcacagcggaaaaagagatggtgctggcacag
gaggaggctgccaggaaccaccaggaaaaacagattgaggagctgctgggcgccatggag
aaggtgaaacaggagctggagtccatgagggccaagctgtcatctacccagcagtccctg
tgtgagaaggaggcccatctgaccacgctaagggctgaacgcaggaaacacctggaggag
gtgctggagatgaaacaggaggcgctgctggcagccatcagtgagaaggatgccaacatc
gccctgctggagctgtcatcgtccaagaagaagaagacgcaggatgaggtggctctgctg
aagagagagaaggaccgtctggtacaacagctcaaacagcagactcagaaccgtatgaag
ctaatggcagacaactatggggacgaccacctgaagaccgcccccgaccagaccaatcac
aaaccttctccagatcagatgatcccccctctcctgtccctgagtgaaaatcgcagtaag
ctgaagctctacatcgaccacctgactgacctctgccacgaccgagaccccagcatcctc
agtgacctgaccccgcccgcccactatcaccacgccaacccagcagcctgggaggaggag
ctacacaagttgactctggagcagttggaactggagttggagttgtgtgagaaggagagt
ggggagctgcaggagtatgccaattcagttctgcagcagatcgctgactactgccctgac
atcctggagcaggtggtcaacgcgctggaggagtcctgctga
DBGET
integrated database retrieval system
