Oncorhynchus nerka (sockeye salmon): 115134209
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Entry
115134209 CDS
T07952
Name
(RefSeq) semaphorin-3ab-like
KO
K06840
semaphorin 3
Organism
one
Oncorhynchus nerka (sockeye salmon)
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Gene cluster
GFIT
Motif
Pfam:
Sema
ig
PSI
Ig_6
Ig_3
Ig_2
V-set
I-set
Motif
Other DBs
NCBI-GeneID:
115134209
NCBI-ProteinID:
XP_029523814
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Position
LG9a:complement(18965152..18997017)
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AA seq
763 aa
AA seq
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MLESNNLVTFEGLANSSAYHTFLLDEEKGRLVVGAKDHIFSFNLLNISRDLAQIPWPAST
SRRDECKWAGKDLMRECANFIKVLQPFNQTHLYVCGTGAFHPVCAYLEVGKKLEDSVFRL
EPLIENGRGKSPYDPKLLTASMLIDGELYSGTSADFMGRDFAIFRTLGQHHPIRTEQHDS
RWLNDPRFVSVHLIPESDNPEDDKIYLFFRENAMDGEHAGKATHARIGQLCKNDFGGHRS
LVNKWTTFLKARLVCSVPGLNGIDTHFDELQDVFLMSAKDPKNPTIYAVFTTSSNIFKGS
AVCLYSMADIRRVFLGPYAHRDGPNYQWVPFPGRVPYPRPGTCPSKTFGGFDSTKDLPDD
VITFARGHPAMFNPIYPINNRPIIVKTDTDYQFTQIVVDKVEAEDGQYDVMFIGTDMGKV
LKVVSIPRGSWHDLEEVLLEEMTVFREPTAITAMELSTKQQQLYLGSELGISQMPLHRCE
VYGKACAECCLARDPYCAWDGTECSRYFPMAKRRTRRQDIRNGDPLTQCSDLQHHDNLNV
QPTVLDKTVYGVENSSTFLECSPKSQRALTYWQYQQVNDDRRQDIKPEDRFVRTEQGLLI
RILNKKDSGTYVCQAVEHGFMQTLLRVTLEVIDTERLDELIHRDDETATHTAATHTTSWD
TPPARESSNQKLWYRDFLSLVNHPTLNSVDEFCEQVWKREKKQRRQKAHLSQQVQLHQQQ
QGLVHAHTHVHAHGLAAKWKHLQERQKGRNRRTHELERAPRSV
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgttggagtccaataacttggtgacatttgagggcctggccaatagctcagcttaccac
acgttcctattggatgaggagaagggtcgtctggtggtgggagccaaggaccacatattc
tccttcaacctgctcaacatcagcagagacctggcacagatcccgtggcctgcatccacc
tccagaagagatgagtgtaaatgggcagggaaggacctcatgagggaatgcgctaacttc
atcaaggtgttgcagccttttaaccagacccatctgtatgtatgtggaaccggagccttc
cacccggtctgcgcctacttggaggtggggaagaaactagaggacagtgtgttcaggctg
gagcccctgatagagaacggtcgagggaaaagcccttatgaccccaagctgctcacagcg
tccatgctcatcgatggcgagctgtattctgggacgtcagcggacttcatggggcgggat
tttgccatcttccgtacattgggacagcatcaccccattagaactgagcaacacgactcc
cgctggctgaatgatcccaggtttgtgagtgtccatctgatcccagagagtgacaacccc
gaggacgacaagatctacctgttcttcagagagaacgctatggatggggaacacgcaggg
aaggctacacacgcacgcatcggtcagctctgcaagaatgactttggaggccacaggagt
ttggtgaataagtggactactttcctgaaggccagactggtgtgttctgtacctggactc
aatggcatagacacacactttgacgaactacaggatgtgtttctgatgagcgctaaggat
cccaagaaccccaccatctatgcagtgttcactacatccagtaacatcttcaagggctca
gcagtgtgtttgtacagcatggcagacatcagaagggtgtttctaggtccctatgcccac
agggacggccctaactatcagtgggttcccttccccggaagggtaccgtacccacgacct
ggcacgtgccccagcaagacattcggaggatttgattcaacaaaggacttgcctgatgat
gtcataacatttgcgagaggacacccagcgatgtttaaccccatctatcccatcaacaac
cgaccaatcatagtcaagacggacacggactaccagttcacacagatagtggtggacaaa
gtggaggctgaggacggacagtatgacgtcatgttcataggcacagacatgggtaaagtg
ctgaaggtggtgtccatccccagagggtcctggcatgacctggaagaggttctactggag
gagatgactgtgttcagggagccaactgctattacagcgatggaactctccacgaagcag
caacagttgtacctaggctcagagctgggcatatcccagatgcctttgcatcgctgtgag
gtgtacgggaaggcgtgtgctgagtgctgtctagctagagacccttactgtgcttgggat
gggaccgagtgctcacgatactttcccatggccaagaggaggacaaggagacaggacatc
aggaatggagaccctttaacccagtgttcagacctgcagcatcatgataacctgaatgtg
cagcccacggtgctggataagacagtgtatggagtggagaacagcagtacgttcctggag
tgtagccccaaatcccagagagcactcacctactggcagtaccaacaagtcaacgacgac
aggagacaagacatcaaaccagaggatcgttttgtccgtacggagcagggcctgctgatc
cgcatattgaacaaaaaggattctgggacttatgtgtgccaggctgtagaacacggcttc
atgcagacgctcctaagggtcaccctggaagtcatcgacactgaacgcctcgacgagctc
attcaccgtgatgacgaaaccgccacacacaccgctgccacacacaccacctcctgggac
acgcccccagcccgggaatcgtccaatcagaagctatggtaccgtgacttcctgtcatta
gtgaaccacccgaccctgaacagcgtggatgagttctgtgagcaggtgtggaagagggaa
aagaagcagaggaggcagaaagcacacctatcccaacaggtccagctacaccagcagcag
cagggcctcgtgcacgctcacacccacgtgcacgcccatgggcttgcggccaagtggaaa
cacctgcaggagaggcagaagggccgcaaccgtcggacccacgaactggagagagccccc
cgcagcgtctga
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