Oncorhynchus nerka (sockeye salmon): 115134230
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Entry
115134230 CDS
T07952
Name
(RefSeq) ras-specific guanine nucleotide-releasing factor 1
KO
K04349
Ras-specific guanine nucleotide-releasing factor 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04010
MAPK signaling pathway
one04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115134230
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115134230
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RhoGEF
PH
RasGEF_N
SOS1_NGEF_PH
GOLGA2L5
IQ
PH_11
PIN_12
MYO6_lever
BIG2_C
DUF641
Motif
Other DBs
NCBI-GeneID:
115134230
NCBI-ProteinID:
XP_029523847
LinkDB
All DBs
Position
LG9a:20009541..20045593
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AA seq
1259 aa
AA seq
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MQKGIRLNDGHVTYLGLLAKKDGTRRGCLSKRSSDNTKWHTKWFALLQNMLFYFESESSS
RPAGLYLLEGCVCDRAPSPKPSQSSKECLEKQYYFTVNFTHENQKALELRTEDVKDGDEW
VAAITHASYRNLATEHETLMQKYLHLIQIVETEKTVAKQLRQQIEDGEIEIERLKSEISG
LHKDNGKIQSSPTADPSEDDDSELKKIKKVQSFLRGWMCRRKWKTIIQDYIRSPHAESMR
KRNQVVFSMLDSEAEYVQQLHILVNNFLRPLRMAASSKKPPITHDDVSSIFLNSETIMFL
HQIFYQGLKARIASWPTLVLADLFDILLPMLNIYQEFVRNHQYSLQILAHCKQNRDFDKL
LKQYEAKPDCEERTLETFLTYPMFQIPRYILTLHELLAHTPHEHVERTSLDYAKSKLEEL
SRIMHDEVSETENIRKNLAIERMIVEGCEILLDTSQTFVRQGSLIQVPMSEKGKITRGRL
GSLTLKKEGERQCFLFSKHVIICTRGSGGKLHLTKNGVVSLIDCTLLEDPEGTDDESKPD
KGVQDMEHLDFKIVVEPKEGQSFTVILVASSRQEKSAWTSDISQCIDNIRCNGLMMNAFE
ENSKVTVPQMIKSDASLYCDDVDIRFSKMMNSCKVLQIRYASVERLLERLTDLRFLSIDF
LNTFLHSYRVFTSADVVLDKLITIYKKPISAIPARSLELFFASSQNNKLLYGEPPKSPRA
SRKFSSPPPLAITKTSSPSRRRKLSLNIPIITGGKALDLAALSCSSNGYASMYSSMSPFS
KTTMDINKLYVTSPITSKIPDEGEGKTDKAEETIVSKQDISVPEESDIDQNQSDDADPET
SPIKSPTTPKNLKCKNSSEFSLFSYNNGTVMSSCRPEMDNNNRSALSAASAFAIATAGAN
EGTPTKEKYRRMSLASTGFPTDQRNGDKEFVIRRAATNRVLNVLRHWVSKHSQDFESNTE
LKLKVIAFLEEVMHDPELLTQERKAAANIIRTLTQEDPGDNQISLEEVTQLASVGKAEAF
ESHSALEIAEQLTLLDHLVFKVIPYEEFFGQGWMKNDKNERTPYIMKTTKHFNDISNLIA
TEILRCDDVTTRVAVMEKWVAVADICRCLHNYNAVLEITSSLNRSSVFRLKKTWLKVSKQ
TKTVIDKLQKLVSSEGRFKNLREALKNCDPPCVPYLGMYLTDLAFIEEGTPNYTEDKLVN
FSKMRMISHIIREIRQFQQTAYKIDHQPMAAQYLLDNSSVLDEESLYEASLRIEPKVNN
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagggaatacgactgaatgatggtcatgtcacctacctgggtcttttggcaaag
aaggatggtacgaggcgaggttgcttgagcaaaaggagctcagacaacacaaaatggcac
acaaagtggttcgctttattacaaaatatgctgttttattttgagagcgagtccagctct
cgacctgcgggattatacctgttggagggatgtgtgtgtgacagagcgccgtcacctaaa
ccatcacaatcatccaaagagtgtttagaaaagcagtactacttcactgtaaatttcacc
catgaaaaccagaaagccctggagttgcgtacagaggatgtcaaggacggtgatgaatgg
gtggctgcaataacacatgccagttacaggaacctggccacggagcacgagacgctcatg
cagaagtatctccatctaattcagatcgtggagacagagaaaacggttgctaagcaactt
cgacaacagatagaggacggggaaatagagattgaacggctaaaatcagagatttccggc
ctgcacaaagacaatgggaagatccagtcgagtccaacagccgaccccagtgaagatgat
gactctgaactcaagaaaataaaaaaagtgcagagtttcctacgaggctggatgtgcagg
aggaagtggaagaccatcatccaggactacatccggtctccccacgccgagagcatgagg
aagaggaaccaggtggtgttcagcatgctggactctgaggctgagtacgtccagcagctc
cacatcctggtcaacaatttcctccgaccgctccgtatggccgccagctccaagaaacca
cccatcacccacgacgacgtcagcagcatcttcctcaacagtgagaccatcatgtttctg
catcaaatattctaccaagggttgaaagcaagaatagcaagctggccaacattagttttg
gctgacctgtttgacatcctgctgccaatgttgaacatctaccaggagtttgtgaggaac
caccaatacagtctgcagatcctggcacactgtaaacagaaccgagactttgacaagctg
ctgaagcagtatgaggccaagccagactgtgaggagaggactctggagaccttcctcacc
taccccatgttccagattccccgctacattcttactctccatgagctcctggcccacaca
ccacatgagcatgtggagaggacaagtctggactacgccaagtcaaagctggaggagctg
tccagaatcatgcatgatgaggtgagtgagacagagaacatcaggaagaacctggccatt
gagcgcatgattgtagagggctgcgagatcctccttgacaccagccagacgtttgtcaga
caaggctctctcatccaggtgccaatgagtgagaagggaaagatcacccgtgggcgactg
ggctctctgactctgaagaaggaaggggagaggcagtgcttcctcttctccaagcatgtc
atcatctgcaccaggggctctggagggaagctgcacctcaccaagaatggcgtggtctct
cttattgactgcactcttctggaagaccccgaggggacagatgatgagtccaaaccagac
aagggtgtacaggacatggagcacctggactttaaaatcgtggtggagcctaaagaaggc
cagtcattcacagtgatcctggtggcctcctcgcggcaggagaaatctgcctggaccagt
gacatcagccagtgcatagacaacatccgctgcaatgggcttatgatgaatgcatttgag
gagaactctaaagtcaccgtgccacagatgatcaagtctgacgccagcctgtactgcgat
gacgtggacatccgtttcagtaagatgatgaactcatgtaaggtgctgcagatccgctat
gccagtgtggaaagacttctagagagattgaccgacctgcgcttcctctcgatcgacttc
ctcaacaccttcctgcattcctaccgcgtgttcaccagcgccgatgtggtgctggacaag
ctcatcactatctacaaaaagcccatcagtgccatcccagcccgatccctggagttgttc
ttcgccagcagtcagaacaataaactcctatatggggagcctcccaaatcccccagggcc
agccgtaagttttcctccccccctcccctggccatcaccaagacatcgtcccccagccgc
cgccgtaaactctccctcaacatccccatcatcactgggggcaaggctctggacctggcc
gcccttagctgctcctccaacggctatgcaagcatgtactcctccatgtcccccttcagc
aagaccaccatggacatcaataagctttatgtcaccagccccatcaccagtaagatccct
gacgagggagagggcaagacagacaaggcagaggagaccattgtgtctaaacaagatatt
tcagttccggaggaaagtgacattgaccaaaaccagagcgatgacgcagacccagaaacg
tctcctatcaagtcgccaaccacccccaaaaacttgaaatgcaaaaactcttcagaattc
tccctgttttcctacaataatggcacggtgatgtcatcgtgccgccctgagatggacaac
aacaatcgcagtgccctctctgcagcctccgccttcgccattgccacggcaggagccaat
gagggcacgcccaccaaggagaagtaccgccgcatgtccctggctagcacagggttccca
acagaccagaggaatggggacaaagagtttgtaatccgaagggctgcaaccaacagagtc
ctgaatgttctgaggcactgggtgtcaaaacactctcaggactttgagagtaatactgag
ctgaagctgaaggtgatagccttcctggaggaagtgatgcatgacccggagctgctgaca
caggagaggaaagcagccgccaacatcatcaggaccctgacacaggaggacccaggtgac
aatcagatcagcctggaggaggtgacacagctggcgtcagtaggaaaggcagaagcgttt
gagagccattctgccctggagatagcagagcagctcaccctactggaccacctggtcttt
aaggtcatcccatatgaagagttctttggtcaaggctggatgaagaatgacaagaatgaa
aggacaccatatatcatgaaaacaacaaagcatttcaatgatatcagtaacctgattgcc
actgagatcctgcgttgtgacgatgtgaccacacgggtggcggtgatggagaagtgggtg
gcggtggcggacatctgccgctgtctccataactacaacgctgtactggagatcacctcc
tccctcaaccgcagctctgtgttccgtctcaagaagacctggctcaaagtgtccaagcag
actaaaaccgtaattgacaagctgcagaagttggtttcgtcagaggggaggttcaaaaac
ctaagagaggctttaaagaactgtgaccctccctgtgtaccatacctggggatgtacctc
actgatctggctttcattgaggaggggacgcccaattacactgaggacaaattagtcaac
ttctcaaagatgaggatgatttcccatatcatcagagaaattagacaattccagcaaaca
gcatacaagattgatcatcagccaatggcagcacagtatttgctggacaacagctctgtt
ctggatgaagaaagcctgtatgaagcctctctcagaattgagcctaaagtcaacaactga
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