Oncorhynchus nerka (sockeye salmon): 115134285
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Entry
115134285 CDS
T07952
Name
(RefSeq) rho family-interacting cell polarization regulator 1-like isoform X1
KO
K24818
Rho family-interacting cell polarization regulator
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
one03037
]
115134285
04990 Domain-containing proteins not elsewhere classified [BR:
one04990
]
115134285
Cilium and associated proteins [BR:
one03037
]
Other cilia and associated proteins
Stereociliary proteins
115134285
Domain-containing proteins not elsewhere classified [BR:
one04990
]
Other domain-containing proteins
HEAT repeat domain-containing proteins
115134285
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PL48
HEAT_2
HR1
FAM92
Motif
Other DBs
NCBI-GeneID:
115134285
NCBI-ProteinID:
XP_029523954
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All DBs
Position
LG9a:23684772..23759394
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AA seq
1170 aa
AA seq
DB search
MPMMRRILLKMCVCRSPSRAVSSMSLSMRPSRRVLSRSITRSQSFAGVNSYDKPYRNLSA
FSTLGVTRKPYRVSRMFTLSAKSPPPKVPQPERLDEVYEALKRGLQSYLQVHQMELDSLS
QQMRESKRNSRLGFLYELDKQVKVNERFMRRLEFHLSKVDELYEAYCMQRRLRDGANKMV
KAYTDSQGSREARESLSEANKGYKEYTENMCMLESELENQLGEFHVKMKGLAGFARLCAG
DTYEILMKYGRQRWKLRGRIEINCKQVWDSEDMVFLPLITEFLSIKVTELKSLANHVVVG
NVSCETKDLFAALPQTVAVDINDLGTIKLSLEVTWNPFDKDDQASTASTVNKPPTVNKRF
STYNQSPPDTPSLREQAFYTAPRSLSSSMMPPKQRWSLLDVFRDTLVERLSQSCSCSDVS
SVHLASANMQTDNMLRRQEDMENGTAWSNSSESSDDSSSPQLSLGLRHTNKNLVQPEVNV
STPSIEISFALRDTATSTPTRLAKQEDVQEETQKEESDIGAAGKDEASGKQAVPNGHARY
SRSLSHISENSADGVLIDRSTSGFVEPSEVTSLQCGICINDIEMVMPARAEWALIPGETV
VVRDPPEQPAPATVTMEESRPESRYSAVSIESDTGLEVVSGAVSEVEPELQSAAPTRTDA
MYQQGASLNPRPDSQAQTQSTEGISFSAHRAVVVEAKKPEAVVAKPTDGKKQQAVDSGIE
EALSAVISSLDDYRGQFPELQVLEQELQLLEETLTCILKGRTCSRSSSVQSLTVETALGS
FDFLNTSDLEDEDEENWEKRSVMDSEHHSAPGRPSEESAGGDEDCEKRCWESPSFGPVST
GCQALDHALLVHLKNCSAQLLRLGTFGPLRCGEMYALDRLLREARVLELIRHVAKETPGG
ATQADEVVPQLEQCQGATLLWQQCTDNGSVYSTSTDAFLTTLAAAYTNRLPERGASLADT
VFLRLVERILDRRLPKRGGQAAREMLTLFQFWSYLEAEGVSELDTHITELAEEVWLVQSL
QSGDQEVLVKALKRPPESSLKREGMHAVSLLLRDPRGKVSASASSLLRSLANQPRHRERA
LVSCLELLENESMETRVCGCKALACLKAKESIDQLVYLCRSDKEDVRDAAKQALLVLGED
GKLAHRHVETSLQEGVPRLFSPGSMTSTSF
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgcccatgatgagaaggatcctcttgaagatgtgcgtgtgcaggagtccctccagagct
gtgtcctccatgtccctttccatgcgcccgtcgcgccgagtcctttccagatccatcact
aggagccagtcctttgctggggtcaactcctacgataagccctacagaaacctatcagcg
ttcagcaccctgggggtcaccaggaagccctacagagtcagcaggatgttcaccctctct
gctaaatcaccaccgcccaaggtgccccagcctgagaggctagacgaagtctatgaggct
ctgaagagaggcctgcagtcttacctgcaggtgcaccagatggagctggacagcctgagc
caacagatgagggagtccaagaggaactctcgcctggggtttctctatgagctggataag
caagtaaaagtgaatgagaggttcatgcgacggcttgagttccatctaagcaaggttgac
gagctgtatgaggcctactgtatgcagcgccggctgagggatggtgccaataaaatggtg
aaggcctacacagactcccagggcagccgcgaggccagagagagcctgtctgaggccaac
aagggctacaaagagtacacagagaacatgtgcatgttggagagcgagctggaaaaccag
ctgggagagttccatgtgaaaatgaagggtctagcagggtttgcacggctgtgtgctgga
gacacatatgagatcttaatgaagtatgggcggcagcgctggaagctgaggggaaggatt
gagatcaactgcaagcaggtgtgggacagcgaggacatggtcttcctgcctctcatcaca
gagttcctatcaataaaggtgacagagctgaagagcctggccaatcacgtggtggtggga
aacgtgtcgtgtgagaccaaggacctgtttgctgctttaccccagacggtggcagtggac
atcaatgacctggggaccatcaaactgagcttggaggtcacctggaaccccttcgacaag
gatgaccaagcctcgaccgccagcacggtcaacaaaccccccacggtgaacaaacgcttc
tccacctacaaccagagtcctcctgataccccctccctacgggaacaggccttctatact
gctccgaggagcctgtcaagcagcatgatgccccccaaacagcgctggtcccttctggat
gtgtttcgtgacacgctggttgagagactgtctcagagctgctcctgcagtgacgtctcc
tcagtccacctggcctctgctaacatgcagactgacaacatgctgaggaggcaggaagat
atggagaatggcacagcatggtctaactcctctgagtcatcagatgactcatccagccct
caactctccctggggctgcgtcacaccaacaagaacctggtccagccagaggtcaatgtc
tccacaccctccattgaaatctcctttgccctccgagacactgccacctccacccctacc
cgcttagccaaacaggaggatgtgcaggaggagacgcagaaggaggagtcagacattggg
gcagcggggaaagatgaggcttctgggaaacaggcagtgcctaacggccacgcccgctac
tcacgctcactcagccatatcagtgagaacagtgccgatggcgtactgatagaccggtca
accagcggatttgtggagccctctgaggtcacctccctgcagtgtgggatctgtataaac
gatattgagatggtgatgcctgccagggcagagtgggcccttatcccaggagagactgtg
gtggtcagagacccccctgagcaacccgccccagctactgtgaccatggaggagagcagg
ccggagagcaggtattctgcagtgtctatagagtccgacacagggttagaggttgtttca
ggggctgtttcagaagtagagccagaacttcagagcgctgcacccactaggactgatgca
atgtatcagcaaggtgcctctctgaatcccagaccagactcacaagcacagacccagagc
actgagggcatatcattcagtgcccacagggcagtggtggtggaggccaagaagcctgag
gctgtagtagccaagcccacagatggtaagaagcagcaggctgtggacagtggaattgag
gaagccctgagtgcagtcatctcctctctggatgactacaggggacagtttcctgagtta
caggtcctggagcaggagttacaactactggaggagacattaacatgtattctgaagggc
cgcacctgcagtcgttcgtccagtgtccagagtctgacggtggagacagccctgggcagc
tttgactttctcaacacctcagacctggaggatgaagatgaggagaactgggagaagagg
agtgtgatggacagtgagcaccacagtgcccccggcaggccatcagaggagagtgcaggg
ggagatgaagactgtgagaagagatgctgggagtccccctcctttggacctgtgagcact
ggctgccaggctctagaccacgccctactggttcatctgaagaattgcagcgcccaactt
ctgaggctggggacctttgggcctctgcgctgtggggagatgtatgctctggaccgccta
ctcagggaagcccgcgtcctcgagcttatcagacatgttgccaaggagacccctggagga
gccactcaggcagatgaggttgttccccagttagaacagtgccaaggggcaacattgcta
tggcaacagtgtacagacaatggcagtgtgtacagcacctccacagacgctttcctcaca
acactggctgctgcttacaccaacagactgcccgagagaggagccagcctggcagacaca
gtgttcttgcgtctggtggagaggattctggataggaggttgcccaagcgtgggggccag
gcagccagagagatgctgactctcttccagttctggagctacctggaggcagagggagtg
agcgagctggacacacacatcactgaactggcagaggaggtctggctggttcagagcctg
cagtcaggagaccaggaggtgctggtgaaggccctgaagaggcctccagagagcagcctg
aagagggaggggatgcatgctgtcagcctgctgctcagggacccccgggggaaggtgtct
gcctctgccagctccctgctccggagcctagccaaccaaccacgccatcgagagagggcc
ctggtaagctgtctggagcttctggagaatgaaagcatggagacgagagtgtgtggctgt
aaagcacttgcatgtctgaaggccaaagagagcatcgaccagctggtctatctctgtcga
tcggacaaggaggacgtgagggatgctgccaaacaagctttgttggtgcttggtgaggac
gggaagttggcccacagacacgttgagacatctctgcaggaaggagtgccacgtctcttc
tcccctggcagcatgaccagcacctccttctaa
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