Oncorhynchus nerka (sockeye salmon): 115134297
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Entry
115134297 CDS
T07952
Name
(RefSeq) nuclear pore complex protein Nup93 isoform X1
KO
K14309
nuclear pore complex protein Nup93
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115134297
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115134297
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115134297
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Motif
Other DBs
NCBI-GeneID:
115134297
NCBI-ProteinID:
XP_029523983
LinkDB
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Position
LG9a:24431586..24468191
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AA seq
820 aa
AA seq
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MEAEGFGELLQQAEQLAAETEAVSELPHVERNLQEIQQAGERLRSRTLTRTSQDAADVKA
SILLGSRGLDIFHISQRLESLSAATTFEPLEPVKDTDIQGFLKNERDNALLSAIEESRRR
TFLLAEEYHRESMLVQWEQVKQRVLHTLLGAGEDALDFSQDIEPSFVSDAGVPGRSALDS
VEVAYGRQIYIFNEKIVNGHVQPNLGDLCASVADSLDDKNVSDMWLMVKQMTDVLLVPAK
DTLKSRTALDMQMAFVTQALQFLQNSYKNYTMVTVFGNLHQAQLGGVPGTYQLVRSFLNI
KLPGPLPGMQDGEVEGHPVWALIYYCLRCGDLGAAMQVVNRAQHQLGDFKTWFQEYMNSP
DRRLAPATENKLRLHYRRVLRNCADPYKRAVYCLIGKCDIADNHGEVADKTEDYLWLKLN
QVCFDDDGSSAPQDRLTLAQLQKQLLEDYGESHFSASQQPFLYFQVLFLTAQFEAAVAFL
FRVERLRSHAVHVALVLYELRLLLKSSGQSAQLLSQEAGDPPMVRRLNFIRLLMLYTRKF
ESTDPREALQYFYFLRNEKNNQGENMFMCCVSELVIESREFDMLLGRLEKDGSRKPGVID
KFAGDTRAIITKVALEAENKGLFEEAVRLYELAKNPDKVLELMNRLLSPVIAQVSAAQSN
KERLKNTAVAIAERYRTQGVAGEKSADSTFYLLLDLMTFFDEYHAGNIDRAYDVMERLKL
VPLSQDSVEERVAAFRNFSDEVRHNLSEVLLATMNILFTQCKRLKGAAAGTPGRPQRSIE
DRDSQLRSQARALITFAGIIPYRMAGDTNARLVQMEVLMN
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggaagcggagggctttggagaactcctgcagcaggcagagcagcttgcagcagagact
gaggccgtgtctgagcttcctcatgttgagaggaaccttcaggagatccagcaggctgga
gagaggctacgctcccgcaccttaactcgaacatcacaagacgctgctgacgtgaaagcg
tccatcctccttgggtccagaggcctggacatcttccacatctcccagcgtctggagagc
ctgagtgctgccaccacctttgaacctctagagccagtgaaggacactgacatccagggc
tttctgaagaatgagagggacaatgcgctgctctctgccatcgaggagtcacgtcgcagg
acgttcctcttggcagaggagtaccaccgcgagtccatgctggttcagtgggagcaggtg
aagcagagagtactgcacaccctgttgggagcaggggaagatgctctggacttcagccaa
gacatagagcccagctttgtgagtgacgcaggagttcctggacggagtgctcttgacagt
gtggaggtggcctatggacgacagatctacatttttaatgagaagatagtgaatggacat
gtccagccaaacctgggagacctctgtgcctcagtggcagacagcctggatgacaagaat
gtgtcggacatgtggttaatggtgaagcagatgacagacgtgctgctggtcccagccaaa
gacacgctgaagagccgcacggccttggacatgcagatggctttcgtcacgcaggccctg
cagttcctgcagaacagctataagaactacaccatggtgacggtgtttgggaacctgcac
caggcccagctaggaggagtccctggcacctatcagctggtgcgcagcttcctcaacatc
aaactgccagggcctctgccaggcatgcaggatggtgaggtggagggtcacccagtctgg
gctctgatctactactgcctgcgctgtggggacctgggggctgccatgcaggtggtgaac
cgggctcagcaccagctgggagacttcaagacctggttccaggagtacatgaacagccct
gacagacgcctggcccccgccacagagaacaagctgcgtctccactaccgcagagtgctg
aggaactgtgctgacccctacaagagggccgtctactgcctcatcgggaagtgtgacatc
gcagacaaccatggagaggtggccgacaagaccgaggactacctgtggcttaagctcaac
caggtgtgcttcgatgacgacggcagcagtgctcctcaggatagactgacattggcccag
ctacagaaacagcttctagaggactacggagagtcccacttctcagccagccaacagccg
ttcctgtacttccaggtgctgttcctcacggcccagtttgaggctgctgtggccttcctg
ttccgggtggagcgtctacgcagtcatgcagttcacgtggctctggttctctacgagcta
cggctgctgctcaagtcatcagggcagagcgcacaactgttgagtcaggaagctggggac
ccccctatggtgcgtcggctcaacttcatccggctgctcatgctctacacgcgcaagttt
gagtccacagacccccgggaggctctacagtacttctacttcctacggaatgaaaaaaac
aaccaaggagagaacatgttcatgtgctgtgttagcgagctggtgattgagagtcgagag
tttgacatgcttctaggaagactggaaaaagatggcagcagaaagcctggagtgattgat
aaatttgccggagacactcgagccattatcacaaaagtggcgctggaggctgagaacaag
ggcctgtttgaggaagcagtaagactgtatgagctggccaagaatccagacaaggtctta
gagctgatgaacaggctgctgagtcctgttatcgcccaagtcagcgctgcccagtccaac
aaggagagactgaagaacactgctgttgccatcgctgagcggtaccggacccagggtgtt
gctggagagaagtctgcagacagcaccttctacctgctgctggacctcatgaccttcttt
gatgagtaccatgctggaaacatagaccgggcctacgatgtgatggagagactgaagctg
gtccctctgagtcaagacagtgtggaggaaagggttgctgcatttcgcaatttcagtgat
gaggtcaggcataatctgtcggaggtactcctggccaccatgaatatcctgttcacgcag
tgcaagcgcctgaagggggccgcagcaggaaccccaggtcgaccacagaggtccatcgag
gacagagactcgcagctgcgcagccaagcccgtgcactgatcacgtttgctgggattatc
ccgtaccgcatggcaggcgacaccaatgcccggctggtgcagatggaggtcctgatgaac
tga
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