Oncorhynchus nerka (sockeye salmon): 115134310
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Entry
115134310 CDS
T07952
Symbol
exosc6
Name
(RefSeq) exosome complex component MTR3
KO
K12587
exosome complex component MTR3
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115134310 (exosc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115134310 (exosc6)
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
115134310 (exosc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
115134310
NCBI-ProteinID:
XP_029524002
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Position
LG9a:complement(24651867..24653496)
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AA seq
277 aa
AA seq
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MPTDTKRVRGPEVSQSPSLFLCKNAVKKSTASNDARVDGRQRGQVDVRSVFVRCGLISQA
KGSAYIEAGNTKLICCVYGPRETERKDETDMKSGRLITDMRFAPFSCRERGSWIQGSDEK
DLSLMLLESLRPGVCLQKYPRSQIEVNVMVLENDGAVLAHAVTCASMALADAGIEMYDLV
LGCSIRQEGATYLIDPTFLEENGYNLASGSRENLGSLTVAFLPSLNQISGLQSDGEMGED
TLTGDVRTCIEGCFKLYPVIQQALSKAVRRKAPPSES
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgatacaaaaagggtacgtggcccagaagtgtctcaaagtccatctctcttt
ctgtgtaaaaacgcggtaaagaagtccaccgcttccaacgacgccagggtagatggcagg
cagcgtggtcaagtggatgtccgttcagtttttgtccgatgtgggctgataagtcaagcc
aaaggttcagcgtacattgaagctgggaacacgaagctcatctgctgtgtgtatggaccc
agagagactgagcgcaaggatgagaccgatatgaaatccggaagacttattactgacatg
agatttgccccattctcttgtcgagagagaggctcgtggattcaaggtagtgatgaaaag
gatctgtcactgatgctgttggagagcctgaggccaggagtgtgcttgcagaagtatcct
cgctctcagattgaagtaaatgtaatggtccttgaaaacgacggcgccgtcctggcacat
gcagtcacctgtgcgtcaatggcgctggcggacgcaggtatagagatgtacgatctggtt
cttggatgctcaatccgtcaggaaggtgccacataccttatcgaccctacctttctggag
gaaaatggatacaacttggcctcaggatccagggagaatttgggaagcctgacagtggca
tttctgcccagtctgaaccagatttctggactacaatcggatggcgagatgggcgaggac
accctgactggggatgtgcgcacatgcattgaggggtgtttcaaactctaccctgtcatt
cagcaagcactgtccaaggcagtacgaagaaaagcaccaccatcagagagctga
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