Oncorhynchus nerka (sockeye salmon): 115134367
Help
Entry
115134367 CDS
T07952
Name
(RefSeq) sphingomyelin phosphodiesterase 3-like
KO
K12352
sphingomyelin phosphodiesterase 3 [EC:
3.1.4.12
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00600
Sphingolipid metabolism
one01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
115134367
Enzymes [BR:
one01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
115134367
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
DUF6721
Exo_endo_phos_PGAP2IP
Motif
Other DBs
NCBI-GeneID:
115134367
NCBI-ProteinID:
XP_029524110
LinkDB
All DBs
Position
LG9a:complement(27583943..27619330)
Genome browser
AA seq
673 aa
AA seq
DB search
MVLHTSPYSSAFLRCLTSLSWGFIFPCYWLLDRLLASCVATSLEKRRRSQDPCSFVTLYV
LVSTPLYLLLLLASLPFALMGFLLWAPLQAARHPYLYTHRSPNKHQAEQGGAASLADWRP
QGRSFCFGSANVCLLPDSLARFNNLSETQRRAREVGKRIRNGASRPQIKIYIDSPTNTSI
SAVSFSSLVTGFPRTSSLDQRPDNTAEAEPLTGCPVHNSSADCPIHTAGADCPIPTTGDD
FPIHPTGNQSSSDCPVHVAGGENTPECPLHTAGAHNSSDCPVHTTVAQNSADCPMHASGV
QISISAPEPDPPEAETGNHQGEGDAESLTGGVPSNNTLSHRTSMFKKHSGRKRRQGDDGI
DHEISAFFPANLDFLCLQEVFDHRATSRLRRQLQHYFPYILSDVGRYAWKGCCSRFKFLN
SGVMLVSRYPILDAHYECYPNGRGEDALAAKGALFVKVQVGTSHREQRVVGYLTCTHLHA
IEGDAAVRCEQLDLLLEWGTDFRKATSRPSEEKGLEDQVAFDVVLGDLNFDNCSSEDKLE
QQHSLFTQYKDPCRLGPGEDKPWALGTLLDTSGLYDEEVSSPESLQKVMENEEGRKEYLV
FPTNKNHCPNQKGRKIPLKGNGRRIDYILYSEAVQQDWKMDIEEFSFITQLAGLTDHLSV
AMRLAVSTGEEEP
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggtcctccacacctctccctactccagtgccttcctgcggtgcctcactagcctgtca
tggggctttatcttcccctgctactggctgctggaccgcctgctagcctcctgtgtggcc
acctctctggaaaagcgccggcgctcccaggacccctgctcctttgtgacgctgtatgtg
ctggtgtccactccgctctacctgctgctcctcctagcctcgctgcccttcgctctaatg
ggcttcctgctgtgggctcccctgcaggcggcccgccatccctatctctacacccaccgc
agcccgaacaagcaccaggctgagcaggggggcgcggcatcactggcggactggaggccg
caaggccgcagcttctgcttcggcagtgccaacgtgtgcctactgccagactccctggca
cgcttcaacaacctgtctgagacccagcgccgtgcccgcgaggtgggaaagcgcatccgt
aatggggccagccggccgcagatcaagatatacatcgactcccccaccaacacctccatc
agcgccgtctccttcagcagcctggtcacggggttcccacgcacctcctcactggaccag
cggcctgacaacacagccgaggccgaacccctcactgggtgcccagtacacaattctagt
gcagactgcccaatacacactgccggtgcagactgccccatacccaccactggtgatgac
ttccccatacacccaacagggaaccagagctcctcagattgtcccgtccacgtagctggt
ggagagaacacaccagagtgcccgcttcacactgctggtgcccataacagctctgactgc
cctgttcacaccacagtggcccagaactcagcagactgccccatgcacgcctctggggtc
cagatcagtatcagtgccccagagccagaccccccagaggccgagacaggaaaccaccaa
ggcgagggtgacgcggagagcctgacagggggggtgccttctaacaacaccctgtcccac
cgcacctccatgttcaagaagcacagcggccgcaagcggcgccaaggcgacgacggcatc
gaccacgagatctctgccttcttccctgccaacctggacttcctgtgtctgcaggaagtg
tttgaccaccgggccacgtccaggctgaggcggcagctgcaacactacttcccctacatc
ctgagtgatgtgggccgctacgcctggaagggctgctgctcccgcttcaagttcctcaac
agtggcgttatgctggtcagccgctaccccatcctggacgcccactatgagtgctaccct
aacgggcgaggggaagatgccctagcagccaaaggagctctctttgtcaaggtgcaggtg
ggaacctcccatcgggagcagagagttgtgggatacctcacctgcactcatctacacgcc
attgaaggagatgcagctgtgcgttgtgagcagttggatctactcttggagtgggggacg
gatttccgcaaggcaacgtcccgcccctcagaggagaagggtctggaggaccaggtggcc
tttgatgttgtcctcggcgacctcaatttcgacaattgctcttcagaggataaactggag
cagcagcattccctcttcacgcagtacaaggacccgtgtcgcctggggccaggggaggac
aagccatgggctctgggaacactactggacaccagtgggctttatgatgaggaggtcagt
tcaccagagagtttacaaaaagtgatggagaatgaggaggggaggaaggaatacctggtg
ttccccaccaataaaaaccactgtcctaatcagaagggcagaaaaatccccctgaaaggc
aatgggaggaggatcgactacatcctttacagtgaggcggtgcagcaggactggaaaatg
gacattgaagagtttagcttcatcacccagctggccggcctcactgaccacctgtctgtg
gccatgcgtctggctgtgtccacaggagaggaggagccttag
DBGET
integrated database retrieval system
